RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 AMPD3Q01432 767 aa10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 HOMER2Q9NSB8 354 aa10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 SPG7Q9UQ90 795 aa10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 CTNNBL1Q8WYA6 563 aaPredicted RBP10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 PPP4R3AQ6IN85 833 aa10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 FSIP1Q8NA03 581 aa10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 KLHL34Q8N239 644 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 LRRC27Q9C0I9 530 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 ZMYND15Q9H091 742 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 CCDC12Q8WUD4 166 aaPredicted RBP10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 SREK1Q8WXA9 508 aaKnown RBP10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 TTC14Q96N46 770 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 ARFGAP3Q9NP61 516 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 CTAGE15A4D2H0 777 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 CTAGE8P0CG41 777 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 CCDC6Q16204 474 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 CTAGE6Q86UF2 777 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 CTAGE4Q8IX94 777 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 TSNARE1Q96NA8 513 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 ABCC11Q96J66 1382 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 MTIF2P46199 727 aaKnown RBP10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 GNG11P61952 73 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 UBE2HP62256 183 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 MSL1Q68DK7 614 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 SULT6B1Q6IMI4 303 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 AEBP2Q6ZN18 517 aaPredicted RBP10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 CTNNA2P26232 953 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 CABP4P57796 275 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 TBC1D2Q9BYX2 928 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 IL1RAPL2Q9NP60 686 aa10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCUBE3-201ENST00000274938 CTCFLQ8NI51 663 aaPredicted RBP10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 CCDC172P0C7W6 258 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 PLVAPQ9BX97 442 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 TMCO5BA8MYB1 307 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 TUBBP07437 444 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 ZNF165P49910 485 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 ZNF530Q6P9A1 599 aaPredicted RBP10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 ABTB2Q8N961 1025 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 FERMT1Q9BQL6 677 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 TMEM57Q8N5G2 664 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 RNF41Q9H4P4 317 aaPredicted RBP10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 LRSAM1Q6UWE0 723 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 STXBP4Q6ZWJ1 553 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 FAM177BA6PVY3 158 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 DDX46Q7L014 1031 aaKnown RBP10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 CTAGE1Q96RT6 745 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 LRP2BPQ9P2M1 347 aa10.03□□□□□ -0.8
SCUBE3-201ENST00000274938 SSRP1Q08945 709 aaKnown RBP10.02□□□□□ -0.8
SCUBE3-201ENST00000274938 NFE2L2Q16236 605 aa10.02□□□□□ -0.8
SCUBE3-201ENST00000274938 CKAP2LQ8IYA6 745 aa10.02□□□□□ -0.8
SCUBE3-201ENST00000274938 CPLX3Q8WVH0 158 aa10.02□□□□□ -0.8
SCUBE3-201ENST00000274938 CCDC77Q9BR77 488 aa10.02□□□□□ -0.8
SCUBE3-201ENST00000274938 ANKS4BQ8N8V4 417 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 SPAG1Q07617 926 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 GRIPAP1Q4V328 841 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 IKBKGQ9Y6K9 419 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 A0A087WZG4 1122 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 KIF4AO95239 1232 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 KIAA0753Q2KHM9 967 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 HS1BP3Q53T59 392 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 NUTM1Q86Y26 1132 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 RMND1Q9NWS8 449 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 LRRC9Q6ZRR7 1453 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 ERBINQ96RT1 1412 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 SPDYE4A6NLX3 237 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 EHMT1Q9H9B1 1298 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 RASAL2Q9UJF2 1139 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 STX6O43752 255 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 HMGB2P26583 209 aaKnown RBP10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 CYLC1P35663 651 aaPredicted RBP10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 IGHMBP2P38935 993 aaKnown RBP10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 PRPHP41219 470 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 JADE2Q9NQC1 790 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 RSPH14Q9UHP6 348 aa10.02□□□□□ -0.81
SCUBE3-201ENST00000274938 CCDC194A0A1B0GVG4 234 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 BAG4O95429 457 aaKnown RBP10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 SEPT6Q14141 434 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 CCDC40Q4G0X9 1142 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 IDH1O75874 414 aaKnown RBP10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 IRX3P78415 501 aaPredicted RBP10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 CFAP70Q5T0N1 1121 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 CCDC121Q6ZUS5 278 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 NOLC1Q14978 699 aaKnown RBP eCLIP10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 ARFGAP2Q8N6H7 521 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 DDX23Q9BUQ8 820 aaKnown RBP10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 ZSCAN16Q9H4T2 348 aaPredicted RBP10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 SLC12A7Q9Y666 1083 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 ATAD2Q6PL18 1390 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 USP5P45974 858 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 CCDC102BQ68D86 513 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 TMEM132EQ6IEE7 984 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 TTC21AQ8NDW8 1320 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 PPP1R14CQ8TAE6 165 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 CALML4Q96GE6 196 aa10.01□□□□□ -0.81
SCUBE3-201ENST00000274938 ACTN2P35609 894 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 WDR66Q8TBY9 1149 aa10□□□□□ -0.81
SCUBE3-201ENST00000274938 SLU7O95391 586 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms