RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 REREQ9P2R6 1566 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 HSPA4P34932 840 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 UBE2HP62256 183 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 ATP8B2P98198 1209 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 C14orf37Q86TY3 774 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 DRC7Q8IY82 874 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 PDCL2Q8N4E4 241 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 TCEANC2Q96MN5 208 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 F13A1P00488 732 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 GJB2P29033 226 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 LTV1Q96GA3 475 aaPredicted RBP15.49■□□□□ 0.07
COL8A1-202ENST00000273342 CPS1P31327 1500 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 PTGS1P23219 599 aa15.49■□□□□ 0.07
COL8A1-202ENST00000273342 MYO5BQ9ULV0 1848 aa15.48■□□□□ 0.07
COL8A1-202ENST00000273342 UBTFL1P0CB47 393 aaPredicted RBP15.48■□□□□ 0.07
COL8A1-202ENST00000273342 EIF2S2P20042 333 aaKnown RBP15.48■□□□□ 0.07
COL8A1-202ENST00000273342 LRMPQ12912 555 aa15.48■□□□□ 0.07
COL8A1-202ENST00000273342 NAA30Q147X3 362 aaPredicted RBP15.48■□□□□ 0.07
COL8A1-202ENST00000273342 UVSSAQ2YD98 709 aa15.48■□□□□ 0.07
COL8A1-202ENST00000273342 LUZP1Q86V48 1076 aa15.48■□□□□ 0.07
COL8A1-202ENST00000273342 SLC26A8Q96RN1 970 aa15.48■□□□□ 0.07
COL8A1-202ENST00000273342 PODXL2Q9NZ53 605 aa15.48■□□□□ 0.07
COL8A1-202ENST00000273342 CDC42BPGQ6DT37 1551 aa15.48■□□□□ 0.07
COL8A1-202ENST00000273342 ANKRD26Q9UPS8 1709 aa15.48■□□□□ 0.07
COL8A1-202ENST00000273342 C16orf45Q96MC5 204 aaPredicted RBP15.48■□□□□ 0.07
COL8A1-202ENST00000273342 PHAXQ9H814 394 aaKnown RBP15.48■□□□□ 0.07
COL8A1-202ENST00000273342 EDC4Q6P2E9 1401 aaKnown RBP15.47■□□□□ 0.07
COL8A1-202ENST00000273342 GNAI3P08754 354 aa15.47■□□□□ 0.07
COL8A1-202ENST00000273342 DMTNQ08495 405 aa15.47■□□□□ 0.07
COL8A1-202ENST00000273342 CHAF1AQ13111 956 aaPredicted RBP15.47■□□□□ 0.07
COL8A1-202ENST00000273342 ADCK5Q3MIX3 580 aa15.47■□□□□ 0.07
COL8A1-202ENST00000273342 LIMCH1Q9UPQ0 1083 aa15.47■□□□□ 0.07
COL8A1-202ENST00000273342 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
COL8A1-202ENST00000273342 CDK12Q9NYV4 1490 aaPredicted RBP15.47■□□□□ 0.07
COL8A1-202ENST00000273342 MAP3K19Q56UN5 1328 aa15.47■□□□□ 0.07
COL8A1-202ENST00000273342 PPP1R42Q7Z4L9 355 aa15.47■□□□□ 0.07
COL8A1-202ENST00000273342 OS9Q13438 667 aaPredicted RBP15.46■□□□□ 0.07
COL8A1-202ENST00000273342 COL9A3Q14050 684 aaPredicted RBP15.46■□□□□ 0.07
COL8A1-202ENST00000273342 PRPF40BQ6NWY9 871 aaKnown RBP15.46■□□□□ 0.07
COL8A1-202ENST00000273342 JAKMIP1Q96N16 626 aaKnown RBP15.46■□□□□ 0.07
COL8A1-202ENST00000273342 NRBP1Q9UHY1 535 aa15.46■□□□□ 0.07
COL8A1-202ENST00000273342 SRGAP3O43295 1099 aa15.46■□□□□ 0.07
COL8A1-202ENST00000273342 KIAA1524Q8TCG1 905 aa15.46■□□□□ 0.07
COL8A1-202ENST00000273342 USP44Q9H0E7 712 aa15.46■□□□□ 0.07
COL8A1-202ENST00000273342 TFIP11Q9UBB9 837 aaKnown RBP15.46■□□□□ 0.07
COL8A1-202ENST00000273342 MLH3Q9UHC1 1453 aa15.46■□□□□ 0.07
COL8A1-202ENST00000273342 CPSF1Q10570 1443 aaKnown RBP15.46■□□□□ 0.07
COL8A1-202ENST00000273342 ANXA1P04083 346 aa15.46■□□□□ 0.06
COL8A1-202ENST00000273342 RBM33Q96EV2 1170 aaKnown RBP15.46■□□□□ 0.06
COL8A1-202ENST00000273342 ALKQ9UM73 1620 aa15.45■□□□□ 0.06
COL8A1-202ENST00000273342 ZNF592Q92610 1267 aa15.45■□□□□ 0.06
COL8A1-202ENST00000273342 KIAA0232Q92628 1395 aa15.45■□□□□ 0.06
COL8A1-202ENST00000273342 PRR36Q9H6K5 1346 aa15.45■□□□□ 0.06
COL8A1-202ENST00000273342 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.45■□□□□ 0.06
COL8A1-202ENST00000273342 SGSM2O43147 1006 aa15.44■□□□□ 0.06
COL8A1-202ENST00000273342 PTH1RQ03431 593 aa15.44■□□□□ 0.06
COL8A1-202ENST00000273342 CCDC186Q7Z3E2 898 aa15.44■□□□□ 0.06
COL8A1-202ENST00000273342 KCNJ4P48050 445 aa15.44■□□□□ 0.06
COL8A1-202ENST00000273342 RHPN1Q8TCX5 695 aa15.44■□□□□ 0.06
COL8A1-202ENST00000273342 LIG1P18858 919 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 CEBPAP49715 358 aaPredicted RBP15.43■□□□□ 0.06
COL8A1-202ENST00000273342 SPTLC3Q9NUV7 552 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 NBPF7P0C2Y1 421 aaPredicted RBP15.43■□□□□ 0.06
COL8A1-202ENST00000273342 STK3Q13188 491 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 TTC14Q96N46 770 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 LSG1Q9H089 658 aaKnown RBP15.43■□□□□ 0.06
COL8A1-202ENST00000273342 MTMR6Q9Y217 621 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 METP08581 1390 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 SOS1Q07889 1333 aaPredicted RBP15.43■□□□□ 0.06
COL8A1-202ENST00000273342 RAD50Q92878 1312 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 CCDC30Q5VVM6 783 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 DIAPH3Q9NSV4 1193 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 PDRG1Q9NUG6 133 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 STAP2Q9UGK3 403 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 AATKQ6ZMQ8 1374 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 ATP7BP35670 1465 aa15.43■□□□□ 0.06
COL8A1-202ENST00000273342 LETM1O95202 739 aaPredicted RBP15.42■□□□□ 0.06
COL8A1-202ENST00000273342 CRB1P82279 1406 aa15.42■□□□□ 0.06
COL8A1-202ENST00000273342 ACEP12821 1306 aa15.42■□□□□ 0.06
COL8A1-202ENST00000273342 CCDC192P0DO97 292 aa15.42■□□□□ 0.06
COL8A1-202ENST00000273342 PI4K2BQ8TCG2 481 aa15.42■□□□□ 0.06
COL8A1-202ENST00000273342 FUCA2Q9BTY2 467 aa15.42■□□□□ 0.06
COL8A1-202ENST00000273342 ATP6V1DQ9Y5K8 247 aa15.42■□□□□ 0.06
COL8A1-202ENST00000273342 TTC21BQ7Z4L5 1316 aa15.42■□□□□ 0.06
COL8A1-202ENST00000273342 GTF2F1P35269 517 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL8A1-202ENST00000273342 AMPHP49418 695 aa15.41■□□□□ 0.06
COL8A1-202ENST00000273342 LARP1BQ659C4 914 aaKnown RBP15.41■□□□□ 0.06
COL8A1-202ENST00000273342 TTC6Q86TZ1 520 aa15.41■□□□□ 0.06
COL8A1-202ENST00000273342 TRIM5Q9C035 493 aa15.41■□□□□ 0.06
COL8A1-202ENST00000273342 GOLGA6L4A6NEF3 574 aa15.41■□□□□ 0.06
COL8A1-202ENST00000273342 ME3Q16798 604 aa15.41■□□□□ 0.06
COL8A1-202ENST00000273342 CNTROBQ8N137 903 aa15.41■□□□□ 0.06
COL8A1-202ENST00000273342 TMEM87AQ8NBN3 555 aa15.41■□□□□ 0.06
COL8A1-202ENST00000273342 HYPKQ9NX55 129 aa15.41■□□□□ 0.06
COL8A1-202ENST00000273342 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL8A1-202ENST00000273342 V9GYY5 206 aaPredicted RBP15.41■□□□□ 0.06
COL8A1-202ENST00000273342 CDC37L1Q7L3B6 337 aa15.41■□□□□ 0.06
COL8A1-202ENST00000273342 FOSBP53539 338 aa15.4■□□□□ 0.06
COL8A1-202ENST00000273342 USHBP1Q8N6Y0 703 aa15.4■□□□□ 0.06
COL8A1-202ENST00000273342 FBXW7Q969H0 707 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms