RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 SSH3Q8TE77 659 aa24.74■■□□□ 1.55
RAB5A-201ENST00000273047 MAP3K2Q9Y2U5 619 aa24.74■■□□□ 1.55
RAB5A-201ENST00000273047 PHRF1Q9P1Y6 1649 aaKnown RBP24.74■■□□□ 1.55
RAB5A-201ENST00000273047 ATF3P18847 181 aa24.74■■□□□ 1.55
RAB5A-201ENST00000273047 RABEP1Q15276 862 aa24.73■■□□□ 1.55
RAB5A-201ENST00000273047 TMEM94Q12767 1356 aa24.73■■□□□ 1.55
RAB5A-201ENST00000273047 SSFA2P28290 1259 aa24.73■■□□□ 1.55
RAB5A-201ENST00000273047 HSPA2P54652 639 aa24.73■■□□□ 1.55
RAB5A-201ENST00000273047 IL25Q9H293 177 aa24.73■■□□□ 1.55
RAB5A-201ENST00000273047 PXDNLA1KZ92 1463 aa24.72■■□□□ 1.55
RAB5A-201ENST00000273047 DBF4Q9UBU7 674 aaPredicted RBP24.72■■□□□ 1.55
RAB5A-201ENST00000273047 REC8O95072 547 aa24.71■■□□□ 1.55
RAB5A-201ENST00000273047 RAB3GAP1Q15042 981 aa24.71■■□□□ 1.55
RAB5A-201ENST00000273047 PIP4K2AP48426 406 aaPredicted RBP24.71■■□□□ 1.55
RAB5A-201ENST00000273047 HOXB7P09629 217 aa24.7■■□□□ 1.54
RAB5A-201ENST00000273047 PKP1Q13835 747 aa24.69■■□□□ 1.54
RAB5A-201ENST00000273047 POLA2Q14181 598 aa24.69■■□□□ 1.54
RAB5A-201ENST00000273047 NFATC2IPQ8NCF5 419 aa24.69■■□□□ 1.54
RAB5A-201ENST00000273047 RHPN1Q8TCX5 695 aa24.69■■□□□ 1.54
RAB5A-201ENST00000273047 ESYT1Q9BSJ8 1104 aa24.69■■□□□ 1.54
RAB5A-201ENST00000273047 PALD1Q9ULE6 856 aa24.69■■□□□ 1.54
RAB5A-201ENST00000273047 N4BP2Q86UW6 1770 aaPredicted RBP24.69■■□□□ 1.54
RAB5A-201ENST00000273047 CSB-PGBD3P0DP91 1061 aa24.69■■□□□ 1.54
RAB5A-201ENST00000273047 CHMLP26374 656 aa24.69■■□□□ 1.54
RAB5A-201ENST00000273047 ZGPATQ8N5A5 531 aaKnown RBP24.68■■□□□ 1.54
RAB5A-201ENST00000273047 RAPGEF4Q8WZA2 1011 aa24.68■■□□□ 1.54
RAB5A-201ENST00000273047 ANO2Q9NQ90 1003 aa24.68■■□□□ 1.54
RAB5A-201ENST00000273047 MYL6BP14649 208 aa24.68■■□□□ 1.54
RAB5A-201ENST00000273047 PA2G4Q9UQ80 394 aaKnown RBP24.68■■□□□ 1.54
RAB5A-201ENST00000273047 NCAPD2Q15021 1401 aa24.67■■□□□ 1.54
RAB5A-201ENST00000273047 C9orf78Q9NZ63 289 aaPredicted RBP24.67■■□□□ 1.54
RAB5A-201ENST00000273047 NOL8Q76FK4 1167 aaKnown RBP24.67■■□□□ 1.54
RAB5A-201ENST00000273047 TUBGCP6Q96RT7 1819 aa24.67■■□□□ 1.54
RAB5A-201ENST00000273047 XRCC6P12956 609 aaKnown RBP eCLIP24.66■■□□□ 1.54
RAB5A-201ENST00000273047 STRCP1A6NGW2 1772 aa24.66■■□□□ 1.54
RAB5A-201ENST00000273047 STAP2Q9UGK3 403 aa24.66■■□□□ 1.54
RAB5A-201ENST00000273047 MST1RQ04912 1400 aa24.65■■□□□ 1.54
RAB5A-201ENST00000273047 CIZ1Q9ULV3 898 aaPredicted RBP24.65■■□□□ 1.54
RAB5A-201ENST00000273047 OS9Q13438 667 aaPredicted RBP24.64■■□□□ 1.54
RAB5A-201ENST00000273047 NEK4P51957 841 aa24.64■■□□□ 1.53
RAB5A-201ENST00000273047 KSR2Q6VAB6 950 aa24.64■■□□□ 1.53
RAB5A-201ENST00000273047 GOLGA6L3A6NEY3 463 aa24.63■■□□□ 1.53
RAB5A-201ENST00000273047 PDIA6Q15084 440 aa24.63■■□□□ 1.53
RAB5A-201ENST00000273047 ZNF790Q6PG37 636 aa24.63■■□□□ 1.53
RAB5A-201ENST00000273047 PI4K2BQ8TCG2 481 aa24.63■■□□□ 1.53
RAB5A-201ENST00000273047 HEG1Q9ULI3 1381 aa24.63■■□□□ 1.53
RAB5A-201ENST00000273047 FSD2A1L4K1 749 aa24.63■■□□□ 1.53
RAB5A-201ENST00000273047 DDX11L8A8MPP1 907 aa24.63■■□□□ 1.53
RAB5A-201ENST00000273047 ALS2Q96Q42 1657 aa24.63■■□□□ 1.53
RAB5A-201ENST00000273047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.62■■□□□ 1.53
RAB5A-201ENST00000273047 MEGF6O75095 1541 aa24.62■■□□□ 1.53
RAB5A-201ENST00000273047 NPHP3Q7Z494 1330 aa24.62■■□□□ 1.53
RAB5A-201ENST00000273047 KDM6AO15550 1401 aaPredicted RBP24.62■■□□□ 1.53
RAB5A-201ENST00000273047 ST18O60284 1047 aa24.62■■□□□ 1.53
RAB5A-201ENST00000273047 JARID2Q92833 1246 aaPredicted RBP24.62■■□□□ 1.53
RAB5A-201ENST00000273047 CHAMP1Q96JM3 812 aa24.62■■□□□ 1.53
RAB5A-201ENST00000273047 PHKG2P15735 406 aa24.61■■□□□ 1.53
RAB5A-201ENST00000273047 KIF1BPQ96EK5 621 aa24.61■■□□□ 1.53
RAB5A-201ENST00000273047 SLC52A2Q9HAB3 445 aa24.61■■□□□ 1.53
RAB5A-201ENST00000273047 RAB11FIP3O75154 756 aa24.6■■□□□ 1.53
RAB5A-201ENST00000273047 TATP17735 454 aaPredicted RBP24.6■■□□□ 1.53
RAB5A-201ENST00000273047 ZNF496Q96IT1 587 aaPredicted RBP24.6■■□□□ 1.53
RAB5A-201ENST00000273047 GBP4Q96PP9 640 aa24.6■■□□□ 1.53
RAB5A-201ENST00000273047 UPF3BQ9BZI7 483 aaKnown RBP24.6■■□□□ 1.53
RAB5A-201ENST00000273047 KIF1AQ12756 1690 aa24.6■■□□□ 1.53
RAB5A-201ENST00000273047 FOXD4L5Q5VV16 416 aaPredicted RBP24.59■■□□□ 1.53
RAB5A-201ENST00000273047 FOXD4L4Q8WXT5 416 aaPredicted RBP24.59■■□□□ 1.53
RAB5A-201ENST00000273047 KAZALD1Q96I82 304 aa24.59■■□□□ 1.53
RAB5A-201ENST00000273047 SUCLG2Q96I99 432 aa24.59■■□□□ 1.53
RAB5A-201ENST00000273047 PANK2Q9BZ23 570 aa24.59■■□□□ 1.53
RAB5A-201ENST00000273047 SIPA1L3O60292 1781 aaPredicted RBP24.58■■□□□ 1.53
RAB5A-201ENST00000273047 CAMTA1Q9Y6Y1 1673 aa24.58■■□□□ 1.53
RAB5A-201ENST00000273047 CYP27B1O15528 508 aa24.58■■□□□ 1.53
RAB5A-201ENST00000273047 KLHDC4Q8TBB5 520 aa24.58■■□□□ 1.53
RAB5A-201ENST00000273047 USP16Q9Y5T5 823 aa24.58■■□□□ 1.53
RAB5A-201ENST00000273047 DDX21Q9NR30 783 aaKnown RBP eCLIP24.58■■□□□ 1.52
RAB5A-201ENST00000273047 HYPKQ9NX55 129 aa24.58■■□□□ 1.52
RAB5A-201ENST00000273047 RIC3Q7Z5B4 369 aa24.57■■□□□ 1.52
RAB5A-201ENST00000273047 BICC1Q9H694 974 aaKnown RBP24.57■■□□□ 1.52
RAB5A-201ENST00000273047 IGKV5-2P06315 115 aa24.56■■□□□ 1.52
RAB5A-201ENST00000273047 SIL1Q9H173 461 aa24.56■■□□□ 1.52
RAB5A-201ENST00000273047 COPS6Q7L5N1 327 aa24.56■■□□□ 1.52
RAB5A-201ENST00000273047 XAGE3Q8WTP9 111 aa24.56■■□□□ 1.52
RAB5A-201ENST00000273047 BAG4O95429 457 aaKnown RBP24.55■■□□□ 1.52
RAB5A-201ENST00000273047 CWC27Q6UX04 472 aaKnown RBP24.55■■□□□ 1.52
RAB5A-201ENST00000273047 CHMP4AQ9BY43 222 aa24.55■■□□□ 1.52
RAB5A-201ENST00000273047 GRM8O00222 908 aa24.55■■□□□ 1.52
RAB5A-201ENST00000273047 SPG7Q9UQ90 795 aa24.55■■□□□ 1.52
RAB5A-201ENST00000273047 C5P01031 1676 aa24.54■■□□□ 1.52
RAB5A-201ENST00000273047 TMX3Q96JJ7 454 aa24.54■■□□□ 1.52
RAB5A-201ENST00000273047 ALDH1L1O75891 902 aa24.54■■□□□ 1.52
RAB5A-201ENST00000273047 IFNL2Q8IZJ0 200 aa24.54■■□□□ 1.52
RAB5A-201ENST00000273047 LINS1Q8NG48 757 aa24.54■■□□□ 1.52
RAB5A-201ENST00000273047 OVOS2A0A0G2JMS6 1433 aa24.53■■□□□ 1.52
RAB5A-201ENST00000273047 CLCN1P35523 988 aa24.53■■□□□ 1.52
RAB5A-201ENST00000273047 MCTP1Q6DN14 999 aa24.53■■□□□ 1.52
RAB5A-201ENST00000273047 CADPS2Q86UW7 1296 aa24.53■■□□□ 1.52
RAB5A-201ENST00000273047 MYD88Q99836 296 aa24.52■■□□□ 1.52
RAB5A-201ENST00000273047 LARP6Q9BRS8 491 aaKnown RBP24.52■■□□□ 1.52
RAB5A-201ENST00000273047 ZDHHC9Q9Y397 364 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms