RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 EDC3Q96F86 508 aaKnown RBP17.2■□□□□ 0.34
TNFRSF11A-201ENST00000269485 USP16Q9Y5T5 823 aa17.2■□□□□ 0.34
TNFRSF11A-201ENST00000269485 PDIA4P13667 645 aaKnown RBP17.19■□□□□ 0.34
TNFRSF11A-201ENST00000269485 NUCB1Q02818 461 aa17.19■□□□□ 0.34
TNFRSF11A-201ENST00000269485 CCDC24Q8N4L8 307 aa17.19■□□□□ 0.34
TNFRSF11A-201ENST00000269485 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
TNFRSF11A-201ENST00000269485 CDK12Q9NYV4 1490 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF11A-201ENST00000269485 NEXNQ0ZGT2 675 aa17.19■□□□□ 0.34
TNFRSF11A-201ENST00000269485 CADPS2Q86UW7 1296 aa17.19■□□□□ 0.34
TNFRSF11A-201ENST00000269485 XAGE3Q8WTP9 111 aa17.19■□□□□ 0.34
TNFRSF11A-201ENST00000269485 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
TNFRSF11A-201ENST00000269485 SNRKQ9NRH2 765 aa17.19■□□□□ 0.34
TNFRSF11A-201ENST00000269485 TPM2P07951 284 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 HDAC1Q13547 482 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 AACSQ86V21 672 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 SMC5Q8IY18 1101 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 NRXN3Q9Y4C0 1643 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 CDC45O75419 566 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 STK3Q13188 491 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 HSP90AB3PQ58FF7 597 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 ARHGEF25Q86VW2 580 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 UBR1Q8IWV7 1749 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 A1BGP04217 495 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 DNAAF4Q8WXU2 420 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 GDPD2Q9HCC8 539 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 CDC42BPGQ6DT37 1551 aa17.18■□□□□ 0.34
TNFRSF11A-201ENST00000269485 OVOS2A0A0J9YW53 1432 aa17.17■□□□□ 0.34
TNFRSF11A-201ENST00000269485 OVOS2Q6IE36 1432 aa17.17■□□□□ 0.34
TNFRSF11A-201ENST00000269485 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.34
TNFRSF11A-201ENST00000269485 FER1L4A9Z1Z3 1794 aa17.17■□□□□ 0.34
TNFRSF11A-201ENST00000269485 MCM4P33991 863 aa17.16■□□□□ 0.34
TNFRSF11A-201ENST00000269485 MCTP1Q6DN14 999 aa17.16■□□□□ 0.34
TNFRSF11A-201ENST00000269485 DIAPH3Q9NSV4 1193 aa17.16■□□□□ 0.34
TNFRSF11A-201ENST00000269485 C3P01024 1663 aa17.16■□□□□ 0.34
TNFRSF11A-201ENST00000269485 ZNF496Q96IT1 587 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF11A-201ENST00000269485 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF11A-201ENST00000269485 RNMTO43148 476 aaKnown RBP17.15■□□□□ 0.34
TNFRSF11A-201ENST00000269485 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
TNFRSF11A-201ENST00000269485 DIP2AQ14689 1571 aa17.15■□□□□ 0.34
TNFRSF11A-201ENST00000269485 MRE11P49959 708 aa17.15■□□□□ 0.34
TNFRSF11A-201ENST00000269485 TECPR2O15040 1411 aa17.15■□□□□ 0.34
TNFRSF11A-201ENST00000269485 GNAI3P08754 354 aa17.15■□□□□ 0.34
TNFRSF11A-201ENST00000269485 PLEKHM2Q8IWE5 1019 aa17.15■□□□□ 0.34
TNFRSF11A-201ENST00000269485 GSPT1P15170 499 aaKnown RBP17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 PAXIP1Q6ZW49 1069 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 RGPD8O14715 1765 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 CCT4P50991 539 aaKnown RBP17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 RAB11FIP4Q86YS3 637 aa17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 UNC5CLQ8IV45 518 aa17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 WWC3Q9ULE0 1092 aa17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 KIAA0232Q92628 1395 aa17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 TBC1D32Q96NH3 1257 aa17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 SLAIN2Q9P270 581 aa17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 PRDM4Q9UKN5 801 aa17.14■□□□□ 0.33
TNFRSF11A-201ENST00000269485 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF11A-201ENST00000269485 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
TNFRSF11A-201ENST00000269485 EIF4A1P60842 406 aaKnown RBP17.13■□□□□ 0.33
TNFRSF11A-201ENST00000269485 ABCC4O15439 1325 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 A0A087WZG4 1122 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 MX1P20591 662 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 TSC1Q92574 1164 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 FBXW7Q969H0 707 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 NPHP3Q7Z494 1330 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 SSFA2P28290 1259 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 CBX1P83916 185 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 AKAP4Q5JQC9 854 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 ARHGAP45Q92619 1136 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 PTMAP06454 111 aaKnown RBP17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 ZNF594Q96JF6 807 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 FSD1Q9BTV5 496 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 TOMM22Q9NS69 142 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
TNFRSF11A-201ENST00000269485 UQCRHLA0A096LP55 91 aa17.11■□□□□ 0.33
TNFRSF11A-201ENST00000269485 UQCRHP07919 91 aa17.11■□□□□ 0.33
TNFRSF11A-201ENST00000269485 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
TNFRSF11A-201ENST00000269485 LARP1Q6PKG0 1096 aaKnown RBP17.11■□□□□ 0.33
TNFRSF11A-201ENST00000269485 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
TNFRSF11A-201ENST00000269485 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF11A-201ENST00000269485 UTRNP46939 3433 aa17.11■□□□□ 0.33
TNFRSF11A-201ENST00000269485 RNF214Q8ND24 703 aa17.11■□□□□ 0.33
TNFRSF11A-201ENST00000269485 LRRC2Q9BYS8 371 aa17.11■□□□□ 0.33
TNFRSF11A-201ENST00000269485 CHGBP05060 677 aa17.1■□□□□ 0.33
TNFRSF11A-201ENST00000269485 FKBP4Q02790 459 aaKnown RBP eCLIP17.1■□□□□ 0.33
TNFRSF11A-201ENST00000269485 DDX49Q9Y6V7 483 aaKnown RBP17.1■□□□□ 0.33
TNFRSF11A-201ENST00000269485 SLC4A8Q2Y0W8 1093 aa17.1■□□□□ 0.33
TNFRSF11A-201ENST00000269485 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
TNFRSF11A-201ENST00000269485 RPAP2Q8IXW5 612 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF11A-201ENST00000269485 USP44Q9H0E7 712 aa17.1■□□□□ 0.33
TNFRSF11A-201ENST00000269485 MED14O60244 1454 aa17.09■□□□□ 0.33
TNFRSF11A-201ENST00000269485 HSP90B1P14625 803 aaKnown RBP17.09■□□□□ 0.33
TNFRSF11A-201ENST00000269485 HELBQ8NG08 1087 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF11A-201ENST00000269485 DDX58O95786 925 aaKnown RBP17.09■□□□□ 0.33
TNFRSF11A-201ENST00000269485 BRINP3Q76B58 766 aa17.09■□□□□ 0.33
TNFRSF11A-201ENST00000269485 PDE1AP54750 535 aa17.09■□□□□ 0.33
TNFRSF11A-201ENST00000269485 ERBB3P21860 1342 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms