RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 IFNL2Q8IZJ0 200 aa19.49■□□□□ 0.71
COPS3-201ENST00000268717 PROM2Q8N271 834 aa19.49■□□□□ 0.71
COPS3-201ENST00000268717 PSDA5PKW4 1024 aaPredicted RBP19.48■□□□□ 0.71
COPS3-201ENST00000268717 MPRIPQ6WCQ1 1025 aa19.48■□□□□ 0.71
COPS3-201ENST00000268717 MRC1P22897 1456 aa19.48■□□□□ 0.71
COPS3-201ENST00000268717 CCDC30Q5VVM6 783 aa19.47■□□□□ 0.71
COPS3-201ENST00000268717 TOGARAM1Q9Y4F4 1720 aa19.47■□□□□ 0.71
COPS3-201ENST00000268717 TCERG1O14776 1098 aaKnown RBP19.47■□□□□ 0.71
COPS3-201ENST00000268717 PRIM1P49642 420 aaKnown RBP19.47■□□□□ 0.71
COPS3-201ENST00000268717 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
COPS3-201ENST00000268717 R3HDM1Q15032 1099 aaKnown RBP19.47■□□□□ 0.71
COPS3-201ENST00000268717 ZBTB40Q9NUA8 1239 aa19.47■□□□□ 0.71
COPS3-201ENST00000268717 ITGB4P16144 1822 aa19.47■□□□□ 0.71
COPS3-201ENST00000268717 BTBD11A6QL63 1104 aa19.46■□□□□ 0.71
COPS3-201ENST00000268717 TXNRD1Q16881 649 aa19.46■□□□□ 0.71
COPS3-201ENST00000268717 NBPF14Q5TI25 921 aa19.46■□□□□ 0.71
COPS3-201ENST00000268717 SYTL4Q96C24 671 aaPredicted RBP19.46■□□□□ 0.71
COPS3-201ENST00000268717 DCAF5Q96JK2 942 aa19.46■□□□□ 0.71
COPS3-201ENST00000268717 STK31Q9BXU1 1019 aa19.46■□□□□ 0.71
COPS3-201ENST00000268717 KDM6AO15550 1401 aaPredicted RBP19.45■□□□□ 0.7
COPS3-201ENST00000268717 SIPA1L3O60292 1781 aaPredicted RBP19.45■□□□□ 0.7
COPS3-201ENST00000268717 HEG1Q9ULI3 1381 aa19.45■□□□□ 0.7
COPS3-201ENST00000268717 INTS3Q68E01 1043 aaKnown RBP19.44■□□□□ 0.7
COPS3-201ENST00000268717 RWDD1Q9H446 243 aaPredicted RBP19.44■□□□□ 0.7
COPS3-201ENST00000268717 PCDHB15Q9Y5E8 787 aa19.44■□□□□ 0.7
COPS3-201ENST00000268717 SLC4A2P04920 1241 aa19.43■□□□□ 0.7
COPS3-201ENST00000268717 NKX1-1Q15270 411 aaPredicted RBP19.43■□□□□ 0.7
COPS3-201ENST00000268717 LY75O60449 1722 aa19.43■□□□□ 0.7
COPS3-201ENST00000268717 HDAC1Q13547 482 aaPredicted RBP19.43■□□□□ 0.7
COPS3-201ENST00000268717 SLC52A2Q9HAB3 445 aa19.43■□□□□ 0.7
COPS3-201ENST00000268717 SCN11AQ9UI33 1791 aa19.42■□□□□ 0.7
COPS3-201ENST00000268717 ZBTB7BO15156 539 aaPredicted RBP19.42■□□□□ 0.7
COPS3-201ENST00000268717 ANO8Q9HCE9 1232 aaPredicted RBP19.42■□□□□ 0.7
COPS3-201ENST00000268717 IGHDP01880 384 aa19.41■□□□□ 0.7
COPS3-201ENST00000268717 PAPPAQ13219 1627 aa19.4■□□□□ 0.7
COPS3-201ENST00000268717 LRP5O75197 1615 aa19.4■□□□□ 0.7
COPS3-201ENST00000268717 HDGFL1Q5TGJ6 251 aa19.4■□□□□ 0.7
COPS3-201ENST00000268717 CACNA1FO60840 1977 aa19.38■□□□□ 0.69
COPS3-201ENST00000268717 PXDNLA1KZ92 1463 aa19.38■□□□□ 0.69
COPS3-201ENST00000268717 KCNQ3O43525 872 aa19.38■□□□□ 0.69
COPS3-201ENST00000268717 LRRC4BQ9NT99 713 aa19.38■□□□□ 0.69
COPS3-201ENST00000268717 FLIIQ13045 1269 aa19.37■□□□□ 0.69
COPS3-201ENST00000268717 SLC27A3Q5K4L6 730 aa19.37■□□□□ 0.69
COPS3-201ENST00000268717 CCT4P50991 539 aaKnown RBP19.36■□□□□ 0.69
COPS3-201ENST00000268717 ERVV-2B6SEH9 535 aa19.36■□□□□ 0.69
COPS3-201ENST00000268717 GIGYF1O75420 1035 aaPredicted RBP19.36■□□□□ 0.69
COPS3-201ENST00000268717 ZNF790Q6PG37 636 aa19.36■□□□□ 0.69
COPS3-201ENST00000268717 CASZ1Q86V15 1759 aa19.35■□□□□ 0.69
COPS3-201ENST00000268717 SLC15A2Q16348 729 aa19.35■□□□□ 0.69
COPS3-201ENST00000268717 STK32BQ9NY57 414 aa19.35■□□□□ 0.69
COPS3-201ENST00000268717 G2E3Q7L622 706 aa19.34■□□□□ 0.69
COPS3-201ENST00000268717 PIGBQ92521 554 aa19.34■□□□□ 0.69
COPS3-201ENST00000268717 NFATC2IPQ8NCF5 419 aa19.33■□□□□ 0.68
COPS3-201ENST00000268717 TMOD3Q9NYL9 352 aa19.33■□□□□ 0.68
COPS3-201ENST00000268717 DBF4Q9UBU7 674 aaPredicted RBP19.33■□□□□ 0.68
COPS3-201ENST00000268717 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
COPS3-201ENST00000268717 TAF1LQ8IZX4 1826 aa19.32■□□□□ 0.68
COPS3-201ENST00000268717 KCNQ4P56696 695 aa19.32■□□□□ 0.68
COPS3-201ENST00000268717 CABP4P57796 275 aa19.32■□□□□ 0.68
COPS3-201ENST00000268717 FKBP5Q13451 457 aaPredicted RBP19.32■□□□□ 0.68
COPS3-201ENST00000268717 SMC5Q8IY18 1101 aa19.32■□□□□ 0.68
COPS3-201ENST00000268717 CCNL1Q9UK58 526 aaPredicted RBP19.32■□□□□ 0.68
COPS3-201ENST00000268717 QSER1Q2KHR3 1735 aa19.31■□□□□ 0.68
COPS3-201ENST00000268717 NECTIN2Q92692 538 aa19.31■□□□□ 0.68
COPS3-201ENST00000268717 C5P01031 1676 aa19.31■□□□□ 0.68
COPS3-201ENST00000268717 N4BP2Q86UW6 1770 aaPredicted RBP19.31■□□□□ 0.68
COPS3-201ENST00000268717 TUBGCP6Q96RT7 1819 aa19.31■□□□□ 0.68
COPS3-201ENST00000268717 ZNF827Q17R98 1081 aa19.3■□□□□ 0.68
COPS3-201ENST00000268717 TTC5Q8N0Z6 440 aa19.3■□□□□ 0.68
COPS3-201ENST00000268717 SMARCC1Q92922 1105 aaPredicted RBP19.3■□□□□ 0.68
COPS3-201ENST00000268717 RBM19Q9Y4C8 960 aaKnown RBP19.3■□□□□ 0.68
COPS3-201ENST00000268717 AKT1S1Q96B36 256 aa19.29■□□□□ 0.68
COPS3-201ENST00000268717 CHPF2Q9P2E5 772 aa19.29■□□□□ 0.68
COPS3-201ENST00000268717 EIF2S2P20042 333 aaKnown RBP19.29■□□□□ 0.68
COPS3-201ENST00000268717 FMNL2Q96PY5 1086 aa19.29■□□□□ 0.68
COPS3-201ENST00000268717 PDGFDQ9GZP0 370 aaPredicted RBP19.29■□□□□ 0.68
COPS3-201ENST00000268717 RPAP2Q8IXW5 612 aaPredicted RBP19.28■□□□□ 0.68
COPS3-201ENST00000268717 GCC1Q96CN9 775 aa19.28■□□□□ 0.68
COPS3-201ENST00000268717 HYPKQ9NX55 129 aa19.28■□□□□ 0.68
COPS3-201ENST00000268717 ATP10DQ9P241 1426 aa19.28■□□□□ 0.68
COPS3-201ENST00000268717 SNRPA1P09661 255 aaKnown RBP19.27■□□□□ 0.68
COPS3-201ENST00000268717 SLC39A6Q13433 755 aa19.27■□□□□ 0.68
COPS3-201ENST00000268717 DDX21Q9NR30 783 aaKnown RBP eCLIP19.27■□□□□ 0.68
COPS3-201ENST00000268717 ASAP1Q9ULH1 1129 aa19.27■□□□□ 0.68
COPS3-201ENST00000268717 F6X3S4 739 aa19.26■□□□□ 0.67
COPS3-201ENST00000268717 PDZRN3Q9UPQ7 1066 aa19.26■□□□□ 0.67
COPS3-201ENST00000268717 IBTKQ9P2D0 1353 aaPredicted RBP19.26■□□□□ 0.67
COPS3-201ENST00000268717 SKAP1Q86WV1 359 aa19.25■□□□□ 0.67
COPS3-201ENST00000268717 ZNF496Q96IT1 587 aaPredicted RBP19.25■□□□□ 0.67
COPS3-201ENST00000268717 PHAXQ9H814 394 aaKnown RBP19.25■□□□□ 0.67
COPS3-201ENST00000268717 GNAI3P08754 354 aa19.25■□□□□ 0.67
COPS3-201ENST00000268717 SLC4A10Q6U841 1118 aa19.25■□□□□ 0.67
COPS3-201ENST00000268717 ANKRD44Q8N8A2 993 aa19.25■□□□□ 0.67
COPS3-201ENST00000268717 SPON1Q9HCB6 807 aa19.25■□□□□ 0.67
COPS3-201ENST00000268717 ATG3Q9NT62 314 aa19.25■□□□□ 0.67
COPS3-201ENST00000268717 ERBB4Q15303 1308 aa19.25■□□□□ 0.67
COPS3-201ENST00000268717 PRAMEF22A3QJZ6 481 aa19.24■□□□□ 0.67
COPS3-201ENST00000268717 HMGB2P26583 209 aaKnown RBP19.24■□□□□ 0.67
COPS3-201ENST00000268717 MEIS3Q99687 375 aa19.24■□□□□ 0.67
COPS3-201ENST00000268717 C4BP0C0L5 1744 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms