RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 CCDC174Q6PII3 467 aa14.57□□□□□ -0.08
CDH11-201ENST00000268603 RRBP1Q9P2E9 1410 aaKnown RBP14.57□□□□□ -0.08
CDH11-201ENST00000268603 PDS5BQ9NTI5 1447 aa14.56□□□□□ -0.08
CDH11-201ENST00000268603 PTCD1O75127 700 aaKnown RBP14.56□□□□□ -0.08
CDH11-201ENST00000268603 CFAP58Q5T655 872 aa14.56□□□□□ -0.08
CDH11-201ENST00000268603 SLF2Q8IX21 1173 aa14.56□□□□□ -0.08
CDH11-201ENST00000268603 KIF5CO60282 957 aa14.56□□□□□ -0.08
CDH11-201ENST00000268603 CCDC117Q8IWD4 279 aaPredicted RBP14.56□□□□□ -0.08
CDH11-201ENST00000268603 NAPBQ9H115 298 aa14.56□□□□□ -0.08
CDH11-201ENST00000268603 A0A1W2PRG0 241 aa14.56□□□□□ -0.08
CDH11-201ENST00000268603 PAFAH1B1P43034 410 aa14.56□□□□□ -0.08
CDH11-201ENST00000268603 CCT4P50991 539 aaKnown RBP14.56□□□□□ -0.08
CDH11-201ENST00000268603 CCDC40Q4G0X9 1142 aa14.56□□□□□ -0.08
CDH11-201ENST00000268603 CPLX3Q8WVH0 158 aa14.56□□□□□ -0.08
CDH11-201ENST00000268603 USO1O60763 962 aaKnown RBP14.56□□□□□ -0.08
CDH11-201ENST00000268603 TRERF1Q96PN7 1200 aa14.56□□□□□ -0.08
CDH11-201ENST00000268603 PAIP2Q9BPZ3 127 aaKnown RBP14.56□□□□□ -0.08
CDH11-201ENST00000268603 SRGAP3O43295 1099 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 BCAR3O75815 825 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 KIF4BQ2VIQ3 1234 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 TTC21AQ8NDW8 1320 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 PHACTR2O75167 634 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 ZC3H6P61129 1189 aaKnown RBP14.55□□□□□ -0.08
CDH11-201ENST00000268603 PDCL2Q8N4E4 241 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 TMOD3Q9NYL9 352 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 CCDC63Q8NA47 563 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 CLGNO14967 610 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 TERF1P54274 439 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 SNX16P57768 344 aa14.55□□□□□ -0.08
CDH11-201ENST00000268603 EXOSC9Q06265 439 aaKnown RBP14.54□□□□□ -0.08
CDH11-201ENST00000268603 ATP2B3Q16720 1220 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 ATF7IPQ6VMQ6 1270 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 FBF1Q8TES7 1133 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 CCDC194A0A1B0GVG4 234 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 MTIF2P46199 727 aaKnown RBP14.54□□□□□ -0.08
CDH11-201ENST00000268603 MCM3P25205 808 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 MAP7D1Q3KQU3 841 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 STXBP4Q6ZWJ1 553 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 SIRT1Q96EB6 747 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 PLS1Q14651 629 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 ALS2CR12Q96Q35 445 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 PRDM10Q9NQV6 1147 aa14.54□□□□□ -0.08
CDH11-201ENST00000268603 POLR3GO15318 223 aaPredicted RBP14.53□□□□□ -0.08
CDH11-201ENST00000268603 STX6O43752 255 aa14.53□□□□□ -0.08
CDH11-201ENST00000268603 PRPF31Q8WWY3 499 aaKnown RBP14.53□□□□□ -0.08
CDH11-201ENST00000268603 FAM212AQ96EL1 285 aa14.53□□□□□ -0.08
CDH11-201ENST00000268603 IL1RAPL2Q9NP60 686 aa14.53□□□□□ -0.08
CDH11-201ENST00000268603 BRPF3Q9ULD4 1205 aa14.53□□□□□ -0.08
CDH11-201ENST00000268603 SPECC1LQ69YQ0 1117 aa14.53□□□□□ -0.08
CDH11-201ENST00000268603 MAATS1Q7Z4T9 603 aa14.53□□□□□ -0.08
CDH11-201ENST00000268603 IQCA1Q86XH1 822 aa14.53□□□□□ -0.08
CDH11-201ENST00000268603 CALML4Q96GE6 196 aa14.53□□□□□ -0.08
CDH11-201ENST00000268603 IQCGQ9H095 443 aaKnown RBP14.53□□□□□ -0.08
CDH11-201ENST00000268603 WWC3Q9ULE0 1092 aa14.53□□□□□ -0.08
CDH11-201ENST00000268603 GUCY1B3Q02153 619 aa14.52□□□□□ -0.08
CDH11-201ENST00000268603 AKAP2Q9Y2D5 859 aa14.52□□□□□ -0.08
CDH11-201ENST00000268603 KRT32Q14532 448 aa14.52□□□□□ -0.08
CDH11-201ENST00000268603 SEPT6Q14141 434 aa14.52□□□□□ -0.08
CDH11-201ENST00000268603 CASTP20810 708 aaKnown RBP14.52□□□□□ -0.09
CDH11-201ENST00000268603 GJC1P36383 396 aa14.52□□□□□ -0.09
CDH11-201ENST00000268603 CADPSQ9ULU8 1353 aa14.52□□□□□ -0.09
CDH11-201ENST00000268603 IDEP14735 1019 aa14.52□□□□□ -0.09
CDH11-201ENST00000268603 GCC1Q96CN9 775 aa14.52□□□□□ -0.09
CDH11-201ENST00000268603 NGLY1Q96IV0 654 aa14.52□□□□□ -0.09
CDH11-201ENST00000268603 ANAPC4Q9UJX5 808 aa14.52□□□□□ -0.09
CDH11-201ENST00000268603 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.51□□□□□ -0.09
CDH11-201ENST00000268603 V9GYY5 206 aaPredicted RBP14.51□□□□□ -0.09
CDH11-201ENST00000268603 A0A087WZG4 1122 aa14.51□□□□□ -0.09
CDH11-201ENST00000268603 SMC1BQ8NDV3 1235 aa14.51□□□□□ -0.09
CDH11-201ENST00000268603 HAUS7Q99871 368 aa14.51□□□□□ -0.09
CDH11-201ENST00000268603 SLC12A7Q9Y666 1083 aa14.51□□□□□ -0.09
CDH11-201ENST00000268603 CEP135Q66GS9 1140 aa14.51□□□□□ -0.09
CDH11-201ENST00000268603 CCDC144CPQ8IYA2 1237 aa14.51□□□□□ -0.09
CDH11-201ENST00000268603 PDZRN3Q9UPQ7 1066 aa14.51□□□□□ -0.09
CDH11-201ENST00000268603 SLC5A1P13866 664 aa14.51□□□□□ -0.09
CDH11-201ENST00000268603 SSRP1Q08945 709 aaKnown RBP14.51□□□□□ -0.09
CDH11-201ENST00000268603 NCBP1Q09161 790 aaKnown RBP14.51□□□□□ -0.09
CDH11-201ENST00000268603 ZNF526Q8TF50 670 aaPredicted RBP14.51□□□□□ -0.09
CDH11-201ENST00000268603 ATP2C2O75185 946 aa14.51□□□□□ -0.09
CDH11-201ENST00000268603 MPRIPQ6WCQ1 1025 aa14.51□□□□□ -0.09
CDH11-201ENST00000268603 BBXQ8WY36 941 aaPredicted RBP14.51□□□□□ -0.09
CDH11-201ENST00000268603 PROCA1Q8NCQ7 364 aaPredicted RBP14.5□□□□□ -0.09
CDH11-201ENST00000268603 PPP6R1Q9UPN7 881 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 NOL3O60936 208 aaKnown RBP14.5□□□□□ -0.09
CDH11-201ENST00000268603 MAP3K12Q12852 859 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 CCDC6Q16204 474 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 EP400NLQ6ZTU2 488 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 NUTM1Q86Y26 1132 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 PHAXQ9H814 394 aaKnown RBP14.5□□□□□ -0.09
CDH11-201ENST00000268603 PFDN4Q9NQP4 134 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 FANCIQ9NVI1 1328 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 URI1O94763 535 aaPredicted RBP14.5□□□□□ -0.09
CDH11-201ENST00000268603 PPP1R9BQ96SB3 815 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 HLA-DOAP06340 250 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 ZSCAN31Q96LW9 406 aaPredicted RBP14.5□□□□□ -0.09
CDH11-201ENST00000268603 FAM107BQ9H098 131 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 CCDC196A0A1B0GTZ2 297 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 TTC36A6NLP5 189 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 YEATS4O95619 227 aa14.5□□□□□ -0.09
CDH11-201ENST00000268603 TOP1P11387 765 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms