RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 SPG7Q9UQ90 795 aa22.24■■□□□ 1.15
VPS37B-201ENST00000267202 MAP3K5Q99683 1374 aa22.23■■□□□ 1.15
VPS37B-201ENST00000267202 CCDC173Q0VFZ6 552 aa22.23■■□□□ 1.15
VPS37B-201ENST00000267202 RGPD1P0DJD0 1748 aa22.23■■□□□ 1.15
VPS37B-201ENST00000267202 SOS1Q07889 1333 aaPredicted RBP22.23■■□□□ 1.15
VPS37B-201ENST00000267202 NBPF6Q5VWK0 638 aa22.23■■□□□ 1.15
VPS37B-201ENST00000267202 NBPF4Q96M43 638 aa22.23■■□□□ 1.15
VPS37B-201ENST00000267202 CWC27Q6UX04 472 aaKnown RBP22.22■■□□□ 1.15
VPS37B-201ENST00000267202 SRCIN1Q9C0H9 1055 aa22.22■■□□□ 1.15
VPS37B-201ENST00000267202 GADD45BO75293 160 aaPredicted RBP22.2■■□□□ 1.15
VPS37B-201ENST00000267202 RHPN1Q8TCX5 695 aa22.2■■□□□ 1.14
VPS37B-201ENST00000267202 FAM13BQ9NYF5 915 aa22.2■■□□□ 1.14
VPS37B-201ENST00000267202 PRAMEF22A3QJZ6 481 aa22.19■■□□□ 1.14
VPS37B-201ENST00000267202 ZNF445P59923 1031 aa22.19■■□□□ 1.14
VPS37B-201ENST00000267202 PA2G4Q9UQ80 394 aaKnown RBP22.19■■□□□ 1.14
VPS37B-201ENST00000267202 TBX22Q9Y458 520 aa22.18■■□□□ 1.14
VPS37B-201ENST00000267202 TOPAZ1Q8N9V7 1692 aa22.18■■□□□ 1.14
VPS37B-201ENST00000267202 MSNP26038 577 aaKnown RBP22.17■■□□□ 1.14
VPS37B-201ENST00000267202 FMN2Q9NZ56 1722 aa22.17■■□□□ 1.14
VPS37B-201ENST00000267202 R3HCC1Q9Y3T6 440 aaKnown RBP22.17■■□□□ 1.14
VPS37B-201ENST00000267202 RASEFQ8IZ41 740 aa22.17■■□□□ 1.14
VPS37B-201ENST00000267202 NALCNQ8IZF0 1738 aa22.17■■□□□ 1.14
VPS37B-201ENST00000267202 TEFQ10587 303 aa22.16■■□□□ 1.14
VPS37B-201ENST00000267202 AIMP1Q12904 312 aaKnown RBP22.16■■□□□ 1.14
VPS37B-201ENST00000267202 ESCO1Q5FWF5 840 aa22.16■■□□□ 1.14
VPS37B-201ENST00000267202 DIP2AQ14689 1571 aa22.16■■□□□ 1.14
VPS37B-201ENST00000267202 ZNF530Q6P9A1 599 aaPredicted RBP22.16■■□□□ 1.14
VPS37B-201ENST00000267202 SSH3Q8TE77 659 aa22.16■■□□□ 1.14
VPS37B-201ENST00000267202 PPP1R9BQ96SB3 815 aa22.16■■□□□ 1.14
VPS37B-201ENST00000267202 PIK3C2AO00443 1686 aa22.16■■□□□ 1.14
VPS37B-201ENST00000267202 BRD1O95696 1058 aa22.15■■□□□ 1.14
VPS37B-201ENST00000267202 PROSER3Q2NL68 480 aa22.15■■□□□ 1.14
VPS37B-201ENST00000267202 CWF19L2Q2TBE0 894 aaKnown RBP22.15■■□□□ 1.14
VPS37B-201ENST00000267202 BTBD11A6QL63 1104 aa22.15■■□□□ 1.14
VPS37B-201ENST00000267202 EIF4A1P60842 406 aaKnown RBP22.15■■□□□ 1.14
VPS37B-201ENST00000267202 DNAAF4Q8WXU2 420 aa22.15■■□□□ 1.14
VPS37B-201ENST00000267202 STAP2Q9UGK3 403 aa22.15■■□□□ 1.14
VPS37B-201ENST00000267202 ZSCAN30Q86W11 494 aa22.14■■□□□ 1.13
VPS37B-201ENST00000267202 PI4K2BQ8TCG2 481 aa22.14■■□□□ 1.13
VPS37B-201ENST00000267202 HTATSF1O43719 755 aaKnown RBP22.14■■□□□ 1.13
VPS37B-201ENST00000267202 PHF8Q9UPP1 1060 aa22.14■■□□□ 1.13
VPS37B-201ENST00000267202 PSME1Q06323 249 aa22.13■■□□□ 1.13
VPS37B-201ENST00000267202 THEMISQ8N1K5 641 aaPredicted RBP22.13■■□□□ 1.13
VPS37B-201ENST00000267202 LRSAM1Q6UWE0 723 aa22.12■■□□□ 1.13
VPS37B-201ENST00000267202 C9orf78Q9NZ63 289 aaPredicted RBP22.12■■□□□ 1.13
VPS37B-201ENST00000267202 CUL4AQ13619 759 aa22.12■■□□□ 1.13
VPS37B-201ENST00000267202 USP48Q86UV5 1035 aa22.12■■□□□ 1.13
VPS37B-201ENST00000267202 SNX14Q9Y5W7 946 aa22.12■■□□□ 1.13
VPS37B-201ENST00000267202 AK2P54819 239 aa22.11■■□□□ 1.13
VPS37B-201ENST00000267202 BEND3Q5T5X7 828 aa22.11■■□□□ 1.13
VPS37B-201ENST00000267202 JARID2Q92833 1246 aaPredicted RBP22.11■■□□□ 1.13
VPS37B-201ENST00000267202 SIL1Q9H173 461 aa22.11■■□□□ 1.13
VPS37B-201ENST00000267202 CNPY2Q9Y2B0 182 aa22.11■■□□□ 1.13
VPS37B-201ENST00000267202 KIF1BPQ96EK5 621 aa22.1■■□□□ 1.13
VPS37B-201ENST00000267202 MAP3K2Q9Y2U5 619 aa22.1■■□□□ 1.13
VPS37B-201ENST00000267202 HSPA4P34932 840 aa22.1■■□□□ 1.13
VPS37B-201ENST00000267202 LARGE1O95461 756 aa22.09■■□□□ 1.13
VPS37B-201ENST00000267202 CASTP20810 708 aaKnown RBP22.09■■□□□ 1.13
VPS37B-201ENST00000267202 MCM2P49736 904 aa22.09■■□□□ 1.13
VPS37B-201ENST00000267202 KIF13AQ9H1H9 1805 aa22.09■■□□□ 1.13
VPS37B-201ENST00000267202 SGSM2O43147 1006 aa22.09■■□□□ 1.13
VPS37B-201ENST00000267202 PTH1RQ03431 593 aa22.09■■□□□ 1.13
VPS37B-201ENST00000267202 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.09■■□□□ 1.13
VPS37B-201ENST00000267202 CNTROBQ8N137 903 aa22.09■■□□□ 1.13
VPS37B-201ENST00000267202 TCHHQ07283 1943 aa22.08■■□□□ 1.13
VPS37B-201ENST00000267202 FIBPO43427 364 aa22.08■■□□□ 1.13
VPS37B-201ENST00000267202 PIP4K2AP48426 406 aaPredicted RBP22.08■■□□□ 1.13
VPS37B-201ENST00000267202 DIAPH3Q9NSV4 1193 aa22.08■■□□□ 1.13
VPS37B-201ENST00000267202 XRN1Q8IZH2 1706 aaKnown RBP22.08■■□□□ 1.13
VPS37B-201ENST00000267202 PRPF40BQ6NWY9 871 aaKnown RBP22.08■■□□□ 1.12
VPS37B-201ENST00000267202 KLHDC4Q8TBB5 520 aa22.08■■□□□ 1.12
VPS37B-201ENST00000267202 TCEANC2Q96MN5 208 aa22.08■■□□□ 1.12
VPS37B-201ENST00000267202 FAM208AQ9UK61 1670 aaKnown RBP22.08■■□□□ 1.12
VPS37B-201ENST00000267202 ANAPC15P60006 121 aa22.07■■□□□ 1.12
VPS37B-201ENST00000267202 PDE4CQ08493 712 aa22.07■■□□□ 1.12
VPS37B-201ENST00000267202 COL9A3Q14050 684 aaPredicted RBP22.07■■□□□ 1.12
VPS37B-201ENST00000267202 POLA2Q14181 598 aa22.07■■□□□ 1.12
VPS37B-201ENST00000267202 CCDC83Q8IWF9 413 aa22.07■■□□□ 1.12
VPS37B-201ENST00000267202 ADCK5Q3MIX3 580 aa22.07■■□□□ 1.12
VPS37B-201ENST00000267202 CCDC8Q9H0W5 538 aaPredicted RBP22.07■■□□□ 1.12
VPS37B-201ENST00000267202 NWD1Q149M9 1564 aa22.07■■□□□ 1.12
VPS37B-201ENST00000267202 PTMAP06454 111 aaKnown RBP22.06■■□□□ 1.12
VPS37B-201ENST00000267202 TPM2P07951 284 aa22.06■■□□□ 1.12
VPS37B-201ENST00000267202 PLCB2Q00722 1185 aa22.06■■□□□ 1.12
VPS37B-201ENST00000267202 RUFY3Q7L099 469 aa22.06■■□□□ 1.12
VPS37B-201ENST00000267202 IP6K1Q92551 441 aa22.06■■□□□ 1.12
VPS37B-201ENST00000267202 LSG1Q9H089 658 aaKnown RBP22.06■■□□□ 1.12
VPS37B-201ENST00000267202 CHMP3Q9Y3E7 222 aa22.06■■□□□ 1.12
VPS37B-201ENST00000267202 RAB11FIP3O75154 756 aa22.06■■□□□ 1.12
VPS37B-201ENST00000267202 CCDC9Q9Y3X0 531 aaKnown RBP22.06■■□□□ 1.12
VPS37B-201ENST00000267202 JAKMIP1Q96N16 626 aaKnown RBP22.05■■□□□ 1.12
VPS37B-201ENST00000267202 PDCL3Q9H2J4 239 aa22.05■■□□□ 1.12
VPS37B-201ENST00000267202 MBD3O95983 291 aa22.05■■□□□ 1.12
VPS37B-201ENST00000267202 KCNJ4P48050 445 aa22.05■■□□□ 1.12
VPS37B-201ENST00000267202 SLC39A6Q13433 755 aa22.05■■□□□ 1.12
VPS37B-201ENST00000267202 AACSQ86V21 672 aa22.05■■□□□ 1.12
VPS37B-201ENST00000267202 NECAB1Q8N987 351 aa22.05■■□□□ 1.12
VPS37B-201ENST00000267202 ORAI2Q96SN7 254 aa22.05■■□□□ 1.12
VPS37B-201ENST00000267202 RAD50Q92878 1312 aa22.05■■□□□ 1.12
VPS37B-201ENST00000267202 A0A0U1RQG5 324 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms