RNA–Protein interactions for RNA: ENST00000264254.10

PDCL3-201, Transcript of phosducin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCL3, Length 1,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3-201ENST00000264254 SPINK5Q9NQ38 1064 aaPredicted RBP22.2■■□□□ 1.14
PDCL3-201ENST00000264254 USP16Q9Y5T5 823 aa22.2■■□□□ 1.14
PDCL3-201ENST00000264254 CICQ96RK0 1608 aaPredicted RBP22.2■■□□□ 1.14
PDCL3-201ENST00000264254 ERBB4Q15303 1308 aa22.2■■□□□ 1.14
PDCL3-201ENST00000264254 ADRA2BP18089 450 aa22.19■■□□□ 1.14
PDCL3-201ENST00000264254 RTCBQ9Y3I0 505 aaKnown RBP22.19■■□□□ 1.14
PDCL3-201ENST00000264254 GNPATO15228 680 aa22.18■■□□□ 1.14
PDCL3-201ENST00000264254 RPS6KA4O75676 772 aa22.18■■□□□ 1.14
PDCL3-201ENST00000264254 SSFA2P28290 1259 aa22.18■■□□□ 1.14
PDCL3-201ENST00000264254 NPM2Q86SE8 214 aaKnown RBP22.18■■□□□ 1.14
PDCL3-201ENST00000264254 TRMT2AQ8IZ69 625 aaKnown RBP22.18■■□□□ 1.14
PDCL3-201ENST00000264254 C5P01031 1676 aa22.17■■□□□ 1.14
PDCL3-201ENST00000264254 ZNF827Q17R98 1081 aa22.17■■□□□ 1.14
PDCL3-201ENST00000264254 INTS5Q6P9B9 1019 aaKnown RBP22.17■■□□□ 1.14
PDCL3-201ENST00000264254 ANO8Q9HCE9 1232 aaPredicted RBP22.17■■□□□ 1.14
PDCL3-201ENST00000264254 PRAMEF22A3QJZ6 481 aa22.16■■□□□ 1.14
PDCL3-201ENST00000264254 TWISTNBQ3B726 338 aaPredicted RBP22.16■■□□□ 1.14
PDCL3-201ENST00000264254 HDGFL1Q5TGJ6 251 aa22.16■■□□□ 1.14
PDCL3-201ENST00000264254 C8orf58Q8NAV2 365 aa22.16■■□□□ 1.14
PDCL3-201ENST00000264254 IL6STP40189 918 aaPredicted RBP22.15■■□□□ 1.14
PDCL3-201ENST00000264254 EXOSC9Q06265 439 aaKnown RBP22.15■■□□□ 1.14
PDCL3-201ENST00000264254 KRT24Q2M2I5 525 aa22.15■■□□□ 1.14
PDCL3-201ENST00000264254 CDCA7LQ96GN5 454 aa22.15■■□□□ 1.14
PDCL3-201ENST00000264254 A0A087WZG4 1122 aa22.14■■□□□ 1.14
PDCL3-201ENST00000264254 CT47B1P0C2W7 299 aaPredicted RBP22.14■■□□□ 1.14
PDCL3-201ENST00000264254 EIF2S2P20042 333 aaKnown RBP22.14■■□□□ 1.14
PDCL3-201ENST00000264254 TRAPPC3LQ5T215 181 aa22.14■■□□□ 1.14
PDCL3-201ENST00000264254 CCDC30Q5VVM6 783 aa22.14■■□□□ 1.14
PDCL3-201ENST00000264254 ZBTB1Q9Y2K1 713 aa22.14■■□□□ 1.14
PDCL3-201ENST00000264254 NUP188Q5SRE5 1749 aa22.14■■□□□ 1.13
PDCL3-201ENST00000264254 C4BP0C0L5 1744 aa22.13■■□□□ 1.13
PDCL3-201ENST00000264254 ELL2O00472 640 aaPredicted RBP22.13■■□□□ 1.13
PDCL3-201ENST00000264254 A1BGP04217 495 aa22.13■■□□□ 1.13
PDCL3-201ENST00000264254 ZNF428Q96B54 188 aa22.13■■□□□ 1.13
PDCL3-201ENST00000264254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.12■■□□□ 1.13
PDCL3-201ENST00000264254 CANXP27824 592 aaKnown RBP22.12■■□□□ 1.13
PDCL3-201ENST00000264254 DBF4Q9UBU7 674 aaPredicted RBP22.12■■□□□ 1.13
PDCL3-201ENST00000264254 TJP1Q07157 1748 aa22.12■■□□□ 1.13
PDCL3-201ENST00000264254 EIF5P55010 431 aaKnown RBP22.11■■□□□ 1.13
PDCL3-201ENST00000264254 R3HDM1Q15032 1099 aaKnown RBP22.11■■□□□ 1.13
PDCL3-201ENST00000264254 TSPYL6Q8N831 410 aa22.11■■□□□ 1.13
PDCL3-201ENST00000264254 VAMP4O75379 141 aa22.1■■□□□ 1.13
PDCL3-201ENST00000264254 SLC16A10Q8TF71 515 aa22.1■■□□□ 1.13
PDCL3-201ENST00000264254 STK31Q9BXU1 1019 aa22.1■■□□□ 1.13
PDCL3-201ENST00000264254 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
PDCL3-201ENST00000264254 RFC4P35249 363 aa22.09■■□□□ 1.13
PDCL3-201ENST00000264254 HYPKQ9NX55 129 aa22.09■■□□□ 1.13
PDCL3-201ENST00000264254 PNPLA7Q6ZV29 1317 aa22.09■■□□□ 1.13
PDCL3-201ENST00000264254 NBPF26B4DH59 902 aa22.08■■□□□ 1.13
PDCL3-201ENST00000264254 PHF14O94880 888 aa22.08■■□□□ 1.13
PDCL3-201ENST00000264254 COL5A3P25940 1745 aaPredicted RBP22.08■■□□□ 1.13
PDCL3-201ENST00000264254 NBPF10Q6P3W6 841 aaKnown RBP22.08■■□□□ 1.13
PDCL3-201ENST00000264254 NBPF15Q8N660 670 aa22.08■■□□□ 1.13
PDCL3-201ENST00000264254 ARHGEF1Q92888 912 aaKnown RBP22.07■■□□□ 1.12
PDCL3-201ENST00000264254 YTHDC1Q96MU7 727 aaKnown RBP22.07■■□□□ 1.12
PDCL3-201ENST00000264254 COL15A1P39059 1388 aa22.07■■□□□ 1.12
PDCL3-201ENST00000264254 RGL2O15211 777 aa22.06■■□□□ 1.12
PDCL3-201ENST00000264254 COL23A1Q86Y22 540 aaPredicted RBP22.06■■□□□ 1.12
PDCL3-201ENST00000264254 NECTIN2Q92692 538 aa22.06■■□□□ 1.12
PDCL3-201ENST00000264254 CHPF2Q9P2E5 772 aa22.06■■□□□ 1.12
PDCL3-201ENST00000264254 ZNF330Q9Y3S2 320 aaPredicted RBP22.06■■□□□ 1.12
PDCL3-201ENST00000264254 TAF1LQ8IZX4 1826 aa22.06■■□□□ 1.12
PDCL3-201ENST00000264254 ZPR1O75312 459 aa22.06■■□□□ 1.12
PDCL3-201ENST00000264254 MYL6BP14649 208 aa22.06■■□□□ 1.12
PDCL3-201ENST00000264254 PDIA6Q15084 440 aa22.06■■□□□ 1.12
PDCL3-201ENST00000264254 NARFQ9UHQ1 456 aa22.05■■□□□ 1.12
PDCL3-201ENST00000264254 PSDA5PKW4 1024 aaPredicted RBP22.04■■□□□ 1.12
PDCL3-201ENST00000264254 AMIGO3Q86WK7 504 aa22.04■■□□□ 1.12
PDCL3-201ENST00000264254 DZIP3Q86Y13 1208 aaKnown RBP22.04■■□□□ 1.12
PDCL3-201ENST00000264254 LAMB4A4D0S4 1761 aa22.04■■□□□ 1.12
PDCL3-201ENST00000264254 USP42Q9H9J4 1324 aaKnown RBP22.03■■□□□ 1.12
PDCL3-201ENST00000264254 ALDH1L2Q3SY69 923 aa22.03■■□□□ 1.12
PDCL3-201ENST00000264254 KIF6Q6ZMV9 814 aa22.03■■□□□ 1.12
PDCL3-201ENST00000264254 PIP4K2AP48426 406 aaPredicted RBP22.02■■□□□ 1.12
PDCL3-201ENST00000264254 LRP10Q7Z4F1 713 aa22.02■■□□□ 1.12
PDCL3-201ENST00000264254 NLGN1Q8N2Q7 840 aa22.02■■□□□ 1.12
PDCL3-201ENST00000264254 ARXQ96QS3 562 aa22.02■■□□□ 1.12
PDCL3-201ENST00000264254 ZNF652Q9Y2D9 606 aa22.02■■□□□ 1.12
PDCL3-201ENST00000264254 ERVV-1B6SEH8 477 aa22.01■■□□□ 1.11
PDCL3-201ENST00000264254 SLC4A2P04920 1241 aa22.01■■□□□ 1.11
PDCL3-201ENST00000264254 PROSER3Q2NL68 480 aa22.01■■□□□ 1.11
PDCL3-201ENST00000264254 CLEC4GQ6UXB4 293 aa22.01■■□□□ 1.11
PDCL3-201ENST00000264254 MTFR1LQ9H019 292 aa22.01■■□□□ 1.11
PDCL3-201ENST00000264254 DDX58O95786 925 aaKnown RBP22■■□□□ 1.11
PDCL3-201ENST00000264254 COPS6Q7L5N1 327 aa22■■□□□ 1.11
PDCL3-201ENST00000264254 SMIM5Q71RC9 77 aa21.99■■□□□ 1.11
PDCL3-201ENST00000264254 XAGE3Q8WTP9 111 aa21.99■■□□□ 1.11
PDCL3-201ENST00000264254 TBC1D2BQ9UPU7 963 aa21.99■■□□□ 1.11
PDCL3-201ENST00000264254 MAP3K15Q6ZN16 1313 aa21.98■■□□□ 1.11
PDCL3-201ENST00000264254 ANXA1P04083 346 aa21.98■■□□□ 1.11
PDCL3-201ENST00000264254 USPL1Q5W0Q7 1092 aa21.98■■□□□ 1.11
PDCL3-201ENST00000264254 QSER1Q2KHR3 1735 aa21.98■■□□□ 1.11
PDCL3-201ENST00000264254 CAMTA2O94983 1202 aa21.97■■□□□ 1.11
PDCL3-201ENST00000264254 GYS1P13807 737 aa21.97■■□□□ 1.11
PDCL3-201ENST00000264254 MYH14Q7Z406 1995 aaKnown RBP21.96■■□□□ 1.11
PDCL3-201ENST00000264254 UBR3Q6ZT12 1888 aa21.96■■□□□ 1.11
PDCL3-201ENST00000264254 AIMP1Q12904 312 aaKnown RBP21.96■■□□□ 1.11
PDCL3-201ENST00000264254 ANKRD13DQ6ZTN6 518 aa21.96■■□□□ 1.11
PDCL3-201ENST00000264254 PLBD2Q8NHP8 589 aa21.96■■□□□ 1.11
PDCL3-201ENST00000264254 PDGFDQ9GZP0 370 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms