RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 RTF1Q92541 710 aaKnown RBP26.89■■□□□ 1.9
CKLF-201ENST00000264001 ADCY9O60503 1353 aa26.88■■□□□ 1.89
CKLF-201ENST00000264001 COL15A1P39059 1388 aa26.88■■□□□ 1.89
CKLF-201ENST00000264001 BTBD11A6QL63 1104 aa26.88■■□□□ 1.89
CKLF-201ENST00000264001 ZPR1O75312 459 aa26.88■■□□□ 1.89
CKLF-201ENST00000264001 STARD3NLO95772 234 aa26.88■■□□□ 1.89
CKLF-201ENST00000264001 DDX10Q13206 875 aaKnown RBP26.88■■□□□ 1.89
CKLF-201ENST00000264001 PXDNLA1KZ92 1463 aa26.87■■□□□ 1.89
CKLF-201ENST00000264001 SENP3-EIF4A1A0A087X0R7 540 aa26.87■■□□□ 1.89
CKLF-201ENST00000264001 MCM10Q7L590 875 aa26.87■■□□□ 1.89
CKLF-201ENST00000264001 KCNQ3O43525 872 aa26.86■■□□□ 1.89
CKLF-201ENST00000264001 CANXP27824 592 aaKnown RBP26.86■■□□□ 1.89
CKLF-201ENST00000264001 TGFB2P61812 414 aa26.86■■□□□ 1.89
CKLF-201ENST00000264001 USPL1Q5W0Q7 1092 aa26.86■■□□□ 1.89
CKLF-201ENST00000264001 FMNL2Q96PY5 1086 aa26.86■■□□□ 1.89
CKLF-201ENST00000264001 DLG5Q8TDM6 1919 aa26.86■■□□□ 1.89
CKLF-201ENST00000264001 DDR1Q08345 913 aa26.85■■□□□ 1.89
CKLF-201ENST00000264001 RALBP1Q15311 655 aa26.85■■□□□ 1.89
CKLF-201ENST00000264001 TEX13AQ9BXU3 409 aaPredicted RBP26.85■■□□□ 1.89
CKLF-201ENST00000264001 NARFQ9UHQ1 456 aa26.85■■□□□ 1.89
CKLF-201ENST00000264001 HTATSF1O43719 755 aaKnown RBP26.84■■□□□ 1.89
CKLF-201ENST00000264001 DCTN1Q14203 1278 aa26.84■■□□□ 1.89
CKLF-201ENST00000264001 NEFMP07197 916 aa26.83■■□□□ 1.89
CKLF-201ENST00000264001 ARFGEF1Q9Y6D6 1849 aa26.83■■□□□ 1.89
CKLF-201ENST00000264001 TM4SF1P30408 202 aa26.82■■□□□ 1.88
CKLF-201ENST00000264001 A0A0G2JLW4 131 aa26.81■■□□□ 1.88
CKLF-201ENST00000264001 EIF5P55010 431 aaKnown RBP26.81■■□□□ 1.88
CKLF-201ENST00000264001 PLEKHF1Q96S99 279 aa26.81■■□□□ 1.88
CKLF-201ENST00000264001 POLRMTO00411 1230 aaKnown RBP26.8■■□□□ 1.88
CKLF-201ENST00000264001 DPEP1P16444 411 aa26.8■■□□□ 1.88
CKLF-201ENST00000264001 AFDNP55196 1824 aaKnown RBP26.79■■□□□ 1.88
CKLF-201ENST00000264001 BCL2L12Q9HB09 334 aa26.79■■□□□ 1.88
CKLF-201ENST00000264001 NFIXQ14938 502 aa26.78■■□□□ 1.88
CKLF-201ENST00000264001 A0A087WZG4 1122 aa26.77■■□□□ 1.88
CKLF-201ENST00000264001 A1BGP04217 495 aa26.77■■□□□ 1.88
CKLF-201ENST00000264001 PNNQ9H307 717 aaKnown RBP26.77■■□□□ 1.88
CKLF-201ENST00000264001 GPBP1L1Q9HC44 474 aaPredicted RBP26.77■■□□□ 1.88
CKLF-201ENST00000264001 TAF7Q15545 349 aaPredicted RBP26.76■■□□□ 1.87
CKLF-201ENST00000264001 BCS1LQ9Y276 419 aa26.76■■□□□ 1.87
CKLF-201ENST00000264001 ZNF330Q9Y3S2 320 aaPredicted RBP26.76■■□□□ 1.87
CKLF-201ENST00000264001 IL6STP40189 918 aaPredicted RBP26.75■■□□□ 1.87
CKLF-201ENST00000264001 NFE2L2Q16236 605 aa26.75■■□□□ 1.87
CKLF-201ENST00000264001 NRXN2Q9P2S2 1712 aa26.74■■□□□ 1.87
CKLF-201ENST00000264001 MAPK8IP3Q9UPT6 1336 aa26.74■■□□□ 1.87
CKLF-201ENST00000264001 PRAMEF22A3QJZ6 481 aa26.74■■□□□ 1.87
CKLF-201ENST00000264001 KCNA3P22001 575 aa26.74■■□□□ 1.87
CKLF-201ENST00000264001 USP16Q9Y5T5 823 aa26.74■■□□□ 1.87
CKLF-201ENST00000264001 SCN7AQ01118 1682 aa26.73■■□□□ 1.87
CKLF-201ENST00000264001 MYBBP1AQ9BQG0 1328 aaKnown RBP26.73■■□□□ 1.87
CKLF-201ENST00000264001 SNRPA1P09661 255 aaKnown RBP26.73■■□□□ 1.87
CKLF-201ENST00000264001 MIS18AQ9NYP9 233 aa26.72■■□□□ 1.87
CKLF-201ENST00000264001 TBC1D2BQ9UPU7 963 aa26.72■■□□□ 1.87
CKLF-201ENST00000264001 SERPINB2P05120 415 aa26.71■■□□□ 1.87
CKLF-201ENST00000264001 BICDL1Q6ZP65 573 aa26.7■■□□□ 1.86
CKLF-201ENST00000264001 NPM2Q86SE8 214 aaKnown RBP26.7■■□□□ 1.86
CKLF-201ENST00000264001 ZNF526Q8TF50 670 aaPredicted RBP26.7■■□□□ 1.86
CKLF-201ENST00000264001 PIM2Q9P1W9 311 aa26.7■■□□□ 1.86
CKLF-201ENST00000264001 KDM3BQ7LBC6 1761 aa26.7■■□□□ 1.86
CKLF-201ENST00000264001 CHRNA5P30532 468 aa26.69■■□□□ 1.86
CKLF-201ENST00000264001 PIP4K2AP48426 406 aaPredicted RBP26.69■■□□□ 1.86
CKLF-201ENST00000264001 THUMPD2Q9BTF0 503 aaKnown RBP26.69■■□□□ 1.86
CKLF-201ENST00000264001 DLEC1Q9Y238 1755 aa26.69■■□□□ 1.86
CKLF-201ENST00000264001 TBC1D9BQ66K14 1250 aa26.68■■□□□ 1.86
CKLF-201ENST00000264001 BCORQ6W2J9 1755 aa26.67■■□□□ 1.86
CKLF-201ENST00000264001 PNISRQ8TF01 805 aaKnown RBP26.67■■□□□ 1.86
CKLF-201ENST00000264001 CAMTA2O94983 1202 aa26.66■■□□□ 1.86
CKLF-201ENST00000264001 LAMB4A4D0S4 1761 aa26.66■■□□□ 1.86
CKLF-201ENST00000264001 DALRD3Q5D0E6 543 aaKnown RBP26.65■■□□□ 1.86
CKLF-201ENST00000264001 ARHGAP27Q6ZUM4 889 aa26.65■■□□□ 1.86
CKLF-201ENST00000264001 DZIP3Q86Y13 1208 aaKnown RBP26.65■■□□□ 1.86
CKLF-201ENST00000264001 CARMIL3Q8ND23 1372 aa26.62■■□□□ 1.85
CKLF-201ENST00000264001 NBPF26B4DH59 902 aa26.62■■□□□ 1.85
CKLF-201ENST00000264001 RIPK4P57078 832 aa26.62■■□□□ 1.85
CKLF-201ENST00000264001 NBPF10Q6P3W6 841 aaKnown RBP26.62■■□□□ 1.85
CKLF-201ENST00000264001 NBPF15Q8N660 670 aa26.62■■□□□ 1.85
CKLF-201ENST00000264001 SBF1O95248 1867 aa26.62■■□□□ 1.85
CKLF-201ENST00000264001 EIF4A1P60842 406 aaKnown RBP26.61■■□□□ 1.85
CKLF-201ENST00000264001 PRKRIP1Q9H875 184 aaPredicted RBP26.61■■□□□ 1.85
CKLF-201ENST00000264001 ANKRD31Q8N7Z5 1873 aa26.61■■□□□ 1.85
CKLF-201ENST00000264001 TMPOP42166 694 aaKnown RBP26.6■■□□□ 1.85
CKLF-201ENST00000264001 CCDC146Q8IYE0 955 aa26.59■■□□□ 1.85
CKLF-201ENST00000264001 SETDB2Q96T68 719 aa26.59■■□□□ 1.85
CKLF-201ENST00000264001 WDR43Q15061 677 aaKnown RBP eCLIP26.58■■□□□ 1.85
CKLF-201ENST00000264001 C2CD5Q86YS7 1000 aa26.58■■□□□ 1.85
CKLF-201ENST00000264001 ZEB1P37275 1124 aaPredicted RBP26.57■■□□□ 1.84
CKLF-201ENST00000264001 PRR5LQ6MZQ0 368 aa26.57■■□□□ 1.84
CKLF-201ENST00000264001 H0YIN7 160 aa26.56■■□□□ 1.84
CKLF-201ENST00000264001 LMOD3Q0VAK6 560 aa26.56■■□□□ 1.84
CKLF-201ENST00000264001 CLEC4GQ6UXB4 293 aa26.56■■□□□ 1.84
CKLF-201ENST00000264001 CCDC24Q8N4L8 307 aa26.56■■□□□ 1.84
CKLF-201ENST00000264001 TSPYL4Q9UJ04 414 aa26.56■■□□□ 1.84
CKLF-201ENST00000264001 ZNF652Q9Y2D9 606 aa26.56■■□□□ 1.84
CKLF-201ENST00000264001 RRP7AQ9Y3A4 280 aaKnown RBP26.56■■□□□ 1.84
CKLF-201ENST00000264001 TNRC6CQ9HCJ0 1690 aaKnown RBP26.55■■□□□ 1.84
CKLF-201ENST00000264001 KIF3CO14782 793 aa26.55■■□□□ 1.84
CKLF-201ENST00000264001 CEP350Q5VT06 3117 aa26.54■■□□□ 1.84
CKLF-201ENST00000264001 HSPA6P17066 643 aa26.54■■□□□ 1.84
CKLF-201ENST00000264001 CNBD1Q8NA66 436 aa26.54■■□□□ 1.84
CKLF-201ENST00000264001 RUNDC1Q96C34 613 aa26.54■■□□□ 1.84
CKLF-201ENST00000264001 BRIP1Q9BX63 1249 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms