RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 SMC1AQ14683 1233 aaKnown RBP15.16■□□□□ 0.02
TMEM260-201ENST00000261556 CEBPAP49715 358 aaPredicted RBP15.15■□□□□ 0.02
TMEM260-201ENST00000261556 CEBPZQ03701 1054 aaKnown RBP15.15■□□□□ 0.02
TMEM260-201ENST00000261556 LRRFIP1Q32MZ4 808 aaKnown RBP15.15■□□□□ 0.02
TMEM260-201ENST00000261556 RTEL1-TNFRSF6BF6WH68 1400 aa15.15■□□□□ 0.02
TMEM260-201ENST00000261556 CT47B1P0C2W7 299 aaPredicted RBP15.15■□□□□ 0.02
TMEM260-201ENST00000261556 FBXO31Q5XUX0 539 aaPredicted RBP15.15■□□□□ 0.02
TMEM260-201ENST00000261556 SMARCE1Q969G3 411 aa15.15■□□□□ 0.02
TMEM260-201ENST00000261556 PAIP2Q9BPZ3 127 aaKnown RBP15.15■□□□□ 0.02
TMEM260-201ENST00000261556 PRDM11Q9NQV5 511 aa15.15■□□□□ 0.02
TMEM260-201ENST00000261556 MX1P20591 662 aa15.15■□□□□ 0.02
TMEM260-201ENST00000261556 GBP2P32456 591 aaPredicted RBP15.15■□□□□ 0.02
TMEM260-201ENST00000261556 FOSBP53539 338 aa15.15■□□□□ 0.02
TMEM260-201ENST00000261556 RNF187Q5TA31 235 aaPredicted RBP15.15■□□□□ 0.02
TMEM260-201ENST00000261556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.15■□□□□ 0.02
TMEM260-201ENST00000261556 RPGRIP1LQ68CZ1 1315 aa15.15■□□□□ 0.02
TMEM260-201ENST00000261556 PLEKHH1Q9ULM0 1364 aa15.15■□□□□ 0.02
TMEM260-201ENST00000261556 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
TMEM260-201ENST00000261556 CHRM1P11229 460 aaPredicted RBP15.14■□□□□ 0.02
TMEM260-201ENST00000261556 TWISTNBQ3B726 338 aaPredicted RBP15.14■□□□□ 0.02
TMEM260-201ENST00000261556 AP1ARQ63HQ0 302 aa15.14■□□□□ 0.02
TMEM260-201ENST00000261556 MCTP2Q6DN12 878 aa15.14■□□□□ 0.02
TMEM260-201ENST00000261556 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.02
TMEM260-201ENST00000261556 ZC3H6P61129 1189 aaKnown RBP15.14■□□□□ 0.01
TMEM260-201ENST00000261556 IRAK4Q9NWZ3 460 aa15.14■□□□□ 0.01
TMEM260-201ENST00000261556 NUTM2BA6NNL0 878 aaPredicted RBP15.14■□□□□ 0.01
TMEM260-201ENST00000261556 NUTM2EB1AL46 878 aaPredicted RBP15.14■□□□□ 0.01
TMEM260-201ENST00000261556 IDI1Q13907 227 aa15.14■□□□□ 0.01
TMEM260-201ENST00000261556 TOM1L2Q6ZVM7 507 aa15.14■□□□□ 0.01
TMEM260-201ENST00000261556 NUTM2AQ8IVF1 878 aaPredicted RBP15.14■□□□□ 0.01
TMEM260-201ENST00000261556 CCDC171Q6TFL3 1326 aa15.14■□□□□ 0.01
TMEM260-201ENST00000261556 DTNBO60941 627 aa15.14■□□□□ 0.01
TMEM260-201ENST00000261556 GOLGA5Q8TBA6 731 aa15.14■□□□□ 0.01
TMEM260-201ENST00000261556 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
TMEM260-201ENST00000261556 ROCK1Q13464 1354 aa15.14■□□□□ 0.01
TMEM260-201ENST00000261556 IBTKQ9P2D0 1353 aaPredicted RBP15.14■□□□□ 0.01
TMEM260-201ENST00000261556 NAP1L1P55209 391 aaKnown RBP15.13■□□□□ 0.01
TMEM260-201ENST00000261556 MAP2K1Q02750 393 aaPredicted RBP15.13■□□□□ 0.01
TMEM260-201ENST00000261556 ZNF530Q6P9A1 599 aaPredicted RBP15.13■□□□□ 0.01
TMEM260-201ENST00000261556 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
TMEM260-201ENST00000261556 H3BQV1 296 aa15.13■□□□□ 0.01
TMEM260-201ENST00000261556 ERLIN1O75477 346 aa15.13■□□□□ 0.01
TMEM260-201ENST00000261556 ZNF165P49910 485 aa15.13■□□□□ 0.01
TMEM260-201ENST00000261556 BRPF1P55201 1214 aaPredicted RBP15.13■□□□□ 0.01
TMEM260-201ENST00000261556 IFFO2Q5TF58 517 aa15.13■□□□□ 0.01
TMEM260-201ENST00000261556 RBM33Q96EV2 1170 aaKnown RBP15.13■□□□□ 0.01
TMEM260-201ENST00000261556 JPH2Q9BR39 696 aaPredicted RBP15.13■□□□□ 0.01
TMEM260-201ENST00000261556 MARCH6O60337 910 aa15.13■□□□□ 0.01
TMEM260-201ENST00000261556 ERLIN2O94905 339 aa15.13■□□□□ 0.01
TMEM260-201ENST00000261556 TATP17735 454 aaPredicted RBP15.13■□□□□ 0.01
TMEM260-201ENST00000261556 HSP90AB4PQ58FF6 505 aa15.13■□□□□ 0.01
TMEM260-201ENST00000261556 NRBP1Q9UHY1 535 aa15.13■□□□□ 0.01
TMEM260-201ENST00000261556 NKTRP30414 1462 aaKnown RBP15.13■□□□□ 0.01
TMEM260-201ENST00000261556 RAD21O60216 631 aa15.12■□□□□ 0.01
TMEM260-201ENST00000261556 SURF6O75683 361 aaKnown RBP15.12■□□□□ 0.01
TMEM260-201ENST00000261556 GCKP35557 465 aa15.12■□□□□ 0.01
TMEM260-201ENST00000261556 CLNS1AP54105 237 aaKnown RBP15.12■□□□□ 0.01
TMEM260-201ENST00000261556 ST5P78524 1137 aa15.12■□□□□ 0.01
TMEM260-201ENST00000261556 HDGFL1Q5TGJ6 251 aa15.12■□□□□ 0.01
TMEM260-201ENST00000261556 CCDC30Q5VVM6 783 aa15.12■□□□□ 0.01
TMEM260-201ENST00000261556 JAKMIP3Q5VZ66 844 aa15.12■□□□□ 0.01
TMEM260-201ENST00000261556 NUDT16Q96DE0 195 aaKnown RBP15.12■□□□□ 0.01
TMEM260-201ENST00000261556 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
TMEM260-201ENST00000261556 CPLX2Q6PUV4 134 aaKnown RBP15.12■□□□□ 0.01
TMEM260-201ENST00000261556 TMEM57Q8N5G2 664 aa15.12■□□□□ 0.01
TMEM260-201ENST00000261556 SSBP05455 408 aaKnown RBP eCLIP15.12■□□□□ 0.01
TMEM260-201ENST00000261556 SMARCC1Q92922 1105 aaPredicted RBP15.12■□□□□ 0.01
TMEM260-201ENST00000261556 AKAP17AQ02040 695 aaKnown RBP15.11■□□□□ 0.01
TMEM260-201ENST00000261556 ANO6Q4KMQ2 910 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 TMX3Q96JJ7 454 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 IQGAP2Q13576 1575 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 LIG1P18858 919 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 ATP2B1P20020 1258 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 VPS53Q5VIR6 699 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 GRIN2AQ12879 1464 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 SHTN1A0MZ66 631 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 SFPQP23246 707 aaKnown RBP eCLIP15.11■□□□□ 0.01
TMEM260-201ENST00000261556 WDR63Q8IWG1 891 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 FAM200AQ8TCP9 573 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 FAM107BQ9H098 131 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 LCMT1Q9UIC8 334 aa15.11■□□□□ 0.01
TMEM260-201ENST00000261556 PNMA6AP0CW24 399 aaPredicted RBP15.1■□□□□ 0.01
TMEM260-201ENST00000261556 TTC19Q6DKK2 380 aaPredicted RBP15.1■□□□□ 0.01
TMEM260-201ENST00000261556 SYNE3Q6ZMZ3 975 aa15.1■□□□□ 0.01
TMEM260-201ENST00000261556 POLKQ9UBT6 870 aa15.1■□□□□ 0.01
TMEM260-201ENST00000261556 SRLQ86TD4 932 aa15.1■□□□□ 0.01
TMEM260-201ENST00000261556 EIF3CLB5ME19 914 aaKnown RBP15.1■□□□□ 0.01
TMEM260-201ENST00000261556 GNAI3P08754 354 aa15.1■□□□□ 0.01
TMEM260-201ENST00000261556 MAGEA9P43362 315 aa15.1■□□□□ 0.01
TMEM260-201ENST00000261556 BMP2KLQ5H9B9 411 aa15.1■□□□□ 0.01
TMEM260-201ENST00000261556 EIF3CQ99613 913 aaKnown RBP15.1■□□□□ 0.01
TMEM260-201ENST00000261556 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.1■□□□□ 0.01
TMEM260-201ENST00000261556 CLCN6P51797 869 aa15.09■□□□□ 0.01
TMEM260-201ENST00000261556 EVCP57679 992 aa15.09■□□□□ 0.01
TMEM260-201ENST00000261556 CLASRPQ8N2M8 674 aaKnown RBP15.09■□□□□ 0.01
TMEM260-201ENST00000261556 RUFY1Q96T51 708 aa15.09■□□□□ 0.01
TMEM260-201ENST00000261556 CCDC69A6NI79 296 aa15.09■□□□□ 0.01
TMEM260-201ENST00000261556 ATP2B2Q01814 1243 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms