RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ARHGAP29Q52LW3 1261 aa14.12□□□□□ -0.15
COL8A1-201ENST00000261037 TRMT112Q9UI30 125 aaKnown RBP14.12□□□□□ -0.15
COL8A1-201ENST00000261037 PPFIA3O75145 1194 aa14.11□□□□□ -0.15
COL8A1-201ENST00000261037 GLRX3O76003 335 aaKnown RBP14.11□□□□□ -0.15
COL8A1-201ENST00000261037 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
COL8A1-201ENST00000261037 LIG1P18858 919 aa14.11□□□□□ -0.15
COL8A1-201ENST00000261037 JAKMIP3Q5VZ66 844 aa14.11□□□□□ -0.15
COL8A1-201ENST00000261037 EIF3JO75822 258 aaKnown RBP14.11□□□□□ -0.15
COL8A1-201ENST00000261037 GBP2P32456 591 aaPredicted RBP14.1□□□□□ -0.15
COL8A1-201ENST00000261037 RARSP54136 660 aaKnown RBP14.1□□□□□ -0.15
COL8A1-201ENST00000261037 IQCEQ6IPM2 695 aa14.1□□□□□ -0.15
COL8A1-201ENST00000261037 RAB11FIP4Q86YS3 637 aa14.1□□□□□ -0.15
COL8A1-201ENST00000261037 ZNF397Q8NF99 534 aaPredicted RBP14.1□□□□□ -0.15
COL8A1-201ENST00000261037 IFIT5Q13325 482 aaKnown RBP14.1□□□□□ -0.15
COL8A1-201ENST00000261037 JARID2Q92833 1246 aaPredicted RBP14.1□□□□□ -0.15
COL8A1-201ENST00000261037 TRMT1LQ7Z2T5 733 aaKnown RBP14.1□□□□□ -0.15
COL8A1-201ENST00000261037 ZBTB3Q9H5J0 574 aa14.1□□□□□ -0.15
COL8A1-201ENST00000261037 SLC12A7Q9Y666 1083 aa14.1□□□□□ -0.15
COL8A1-201ENST00000261037 SLC5A1P13866 664 aa14.09□□□□□ -0.15
COL8A1-201ENST00000261037 CCDC148Q8NFR7 591 aa14.09□□□□□ -0.15
COL8A1-201ENST00000261037 C8orf76Q96K31 380 aa14.09□□□□□ -0.15
COL8A1-201ENST00000261037 C11orf95C9JLR9 678 aaPredicted RBP14.09□□□□□ -0.15
COL8A1-201ENST00000261037 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
COL8A1-201ENST00000261037 TSHZ3Q63HK5 1081 aa14.09□□□□□ -0.15
COL8A1-201ENST00000261037 CIZ1Q9ULV3 898 aaPredicted RBP14.09□□□□□ -0.15
COL8A1-201ENST00000261037 SSFA2P28290 1259 aa14.09□□□□□ -0.15
COL8A1-201ENST00000261037 TNIP1Q15025 636 aa14.09□□□□□ -0.15
COL8A1-201ENST00000261037 SSRP1Q08945 709 aaKnown RBP14.08□□□□□ -0.15
COL8A1-201ENST00000261037 CPLX3Q8WVH0 158 aa14.08□□□□□ -0.15
COL8A1-201ENST00000261037 GOLGA8AA7E2F4 631 aa14.08□□□□□ -0.16
COL8A1-201ENST00000261037 GOLGA8BA8MQT2 603 aa14.08□□□□□ -0.16
COL8A1-201ENST00000261037 CKAP2LQ8IYA6 745 aa14.08□□□□□ -0.16
COL8A1-201ENST00000261037 ZNF213O14771 459 aa14.08□□□□□ -0.16
COL8A1-201ENST00000261037 ZNF444Q8N0Y2 327 aaPredicted RBP14.08□□□□□ -0.16
COL8A1-201ENST00000261037 DNAAF4Q8WXU2 420 aa14.08□□□□□ -0.16
COL8A1-201ENST00000261037 RPGRQ92834 1020 aaKnown RBP14.08□□□□□ -0.16
COL8A1-201ENST00000261037 TSG101Q99816 390 aa14.08□□□□□ -0.16
COL8A1-201ENST00000261037 MAP3K2Q9Y2U5 619 aa14.08□□□□□ -0.16
COL8A1-201ENST00000261037 MAP3K12Q12852 859 aa14.08□□□□□ -0.16
COL8A1-201ENST00000261037 DESP17661 470 aa14.08□□□□□ -0.16
COL8A1-201ENST00000261037 CASQ1P31415 396 aa14.08□□□□□ -0.16
COL8A1-201ENST00000261037 TNNT1P13805 278 aa14.07□□□□□ -0.16
COL8A1-201ENST00000261037 SPA17Q15506 151 aa14.07□□□□□ -0.16
COL8A1-201ENST00000261037 CCDC113Q9H0I3 377 aa14.07□□□□□ -0.16
COL8A1-201ENST00000261037 NKTRP30414 1462 aaKnown RBP14.07□□□□□ -0.16
COL8A1-201ENST00000261037 FAM135AQ9P2D6 1515 aa14.07□□□□□ -0.16
COL8A1-201ENST00000261037 CCDC178Q5BJE1 867 aa14.07□□□□□ -0.16
COL8A1-201ENST00000261037 WDR78Q5VTH9 848 aa14.07□□□□□ -0.16
COL8A1-201ENST00000261037 ZNF287Q9HBT7 754 aa14.07□□□□□ -0.16
COL8A1-201ENST00000261037 ANKRD18BA2A2Z9 1011 aa14.07□□□□□ -0.16
COL8A1-201ENST00000261037 NLRP5P59047 1200 aa14.07□□□□□ -0.16
COL8A1-201ENST00000261037 TTLL12Q14166 644 aaPredicted RBP14.07□□□□□ -0.16
COL8A1-201ENST00000261037 CTCFLQ8NI51 663 aaPredicted RBP14.07□□□□□ -0.16
COL8A1-201ENST00000261037 PPP1R12BO60237 982 aaPredicted RBP14.07□□□□□ -0.16
COL8A1-201ENST00000261037 ATP5J2-PTCD1G3V325 749 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 IFIT3O14879 490 aaKnown RBP14.06□□□□□ -0.16
COL8A1-201ENST00000261037 FKBP15Q5T1M5 1219 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 CCDC183Q5T5S1 534 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 CACNA2D4Q7Z3S7 1137 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 FOXO3O43524 673 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 ALDH1L2Q3SY69 923 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 GDPD2Q9HCC8 539 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 SNRKQ9NRH2 765 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 A0A087WZG4 1122 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 GOLIM4O00461 696 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 GOPCQ9HD26 462 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 FBXO31Q5XUX0 539 aaPredicted RBP14.06□□□□□ -0.16
COL8A1-201ENST00000261037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL8A1-201ENST00000261037 VAT1LQ9HCJ6 419 aa14.06□□□□□ -0.16
COL8A1-201ENST00000261037 POTEJP0CG39 1038 aa14.05□□□□□ -0.16
COL8A1-201ENST00000261037 HAND2P61296 217 aa14.05□□□□□ -0.16
COL8A1-201ENST00000261037 BIN1O00499 593 aa14.05□□□□□ -0.16
COL8A1-201ENST00000261037 CCDC97Q96F63 343 aaPredicted RBP14.05□□□□□ -0.16
COL8A1-201ENST00000261037 ANO10Q9NW15 660 aa14.05□□□□□ -0.16
COL8A1-201ENST00000261037 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
COL8A1-201ENST00000261037 FAM83GA6ND36 823 aa14.05□□□□□ -0.16
COL8A1-201ENST00000261037 ISM2Q6H9L7 571 aa14.05□□□□□ -0.16
COL8A1-201ENST00000261037 NUP88Q99567 741 aaPredicted RBP14.05□□□□□ -0.16
COL8A1-201ENST00000261037 SFPQP23246 707 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL8A1-201ENST00000261037 AMOTQ4VCS5 1084 aa14.05□□□□□ -0.16
COL8A1-201ENST00000261037 CUL5Q93034 780 aa14.05□□□□□ -0.16
COL8A1-201ENST00000261037 GOLGA6L7A0A1B0GV03 622 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 ESPNB1AK53 854 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 GJB2P29033 226 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 CEBPAP49715 358 aaPredicted RBP14.04□□□□□ -0.16
COL8A1-201ENST00000261037 ADGRF5Q8IZF2 1346 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 TOP1P11387 765 aaKnown RBP14.04□□□□□ -0.16
COL8A1-201ENST00000261037 PPP4R3AQ6IN85 833 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 PHF8Q9UPP1 1060 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 AMOTL2Q9Y2J4 779 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 UBXN4Q92575 508 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 TRMT1Q9NXH9 659 aaKnown RBP14.04□□□□□ -0.16
COL8A1-201ENST00000261037 CNNM3Q8NE01 707 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 CTNNBL1Q8WYA6 563 aaPredicted RBP14.04□□□□□ -0.16
COL8A1-201ENST00000261037 PANK2Q9BZ23 570 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 RAPGEF6Q8TEU7 1601 aa14.04□□□□□ -0.16
COL8A1-201ENST00000261037 NCOA1Q15788 1441 aa14.03□□□□□ -0.16
COL8A1-201ENST00000261037 FANCAO15360 1455 aa14.03□□□□□ -0.16
COL8A1-201ENST00000261037 THOC2Q8NI27 1593 aaKnown RBP14.03□□□□□ -0.16
COL8A1-201ENST00000261037 EZRP15311 586 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms