RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 GCC1Q96CN9 775 aa28.05■■■□□ 2.08
SIX3-201ENST00000260653 USP16Q9Y5T5 823 aa28.05■■■□□ 2.08
SIX3-201ENST00000260653 NUCB1Q02818 461 aa28.04■■■□□ 2.08
SIX3-201ENST00000260653 RPAP2Q8IXW5 612 aaPredicted RBP28.03■■■□□ 2.08
SIX3-201ENST00000260653 PAPPAQ13219 1627 aa28.03■■■□□ 2.08
SIX3-201ENST00000260653 UBR2Q8IWV8 1755 aa28.03■■■□□ 2.08
SIX3-201ENST00000260653 SPATA31A1Q5TZJ5 1347 aa28.02■■■□□ 2.08
SIX3-201ENST00000260653 FAM161AQ3B820 660 aa28.02■■■□□ 2.08
SIX3-201ENST00000260653 C8orf34Q49A92 452 aa28.02■■■□□ 2.08
SIX3-201ENST00000260653 SRCIN1Q9C0H9 1055 aa28.01■■■□□ 2.08
SIX3-201ENST00000260653 SLIT2O94813 1529 aa28.01■■■□□ 2.07
SIX3-201ENST00000260653 NWD2Q9ULI1 1742 aa28.01■■■□□ 2.07
SIX3-201ENST00000260653 GNAI2P04899 355 aa28■■■□□ 2.07
SIX3-201ENST00000260653 GNAI3P08754 354 aa28■■■□□ 2.07
SIX3-201ENST00000260653 LNPKQ9C0E8 428 aa28■■■□□ 2.07
SIX3-201ENST00000260653 USP44Q9H0E7 712 aa28■■■□□ 2.07
SIX3-201ENST00000260653 KCPQ6ZWJ8 1503 aa28■■■□□ 2.07
SIX3-201ENST00000260653 MYL6BP14649 208 aa28■■■□□ 2.07
SIX3-201ENST00000260653 BEND3Q5T5X7 828 aa28■■■□□ 2.07
SIX3-201ENST00000260653 CHD1LQ86WJ1 897 aa28■■■□□ 2.07
SIX3-201ENST00000260653 LAMB4A4D0S4 1761 aa28■■■□□ 2.07
SIX3-201ENST00000260653 MAP3K2Q9Y2U5 619 aa27.99■■■□□ 2.07
SIX3-201ENST00000260653 JCADQ9P266 1359 aa27.99■■■□□ 2.07
SIX3-201ENST00000260653 EXOC5O00471 708 aa27.99■■■□□ 2.07
SIX3-201ENST00000260653 AIMP1Q12904 312 aaKnown RBP27.99■■■□□ 2.07
SIX3-201ENST00000260653 CERKQ8TCT0 537 aa27.99■■■□□ 2.07
SIX3-201ENST00000260653 TMOD3Q9NYL9 352 aa27.99■■■□□ 2.07
SIX3-201ENST00000260653 ANKRD45Q5TZF3 282 aa27.98■■■□□ 2.07
SIX3-201ENST00000260653 TNS2Q63HR2 1409 aa27.98■■■□□ 2.07
SIX3-201ENST00000260653 KSR2Q6VAB6 950 aa27.98■■■□□ 2.07
SIX3-201ENST00000260653 PIP4K2AP48426 406 aaPredicted RBP27.98■■■□□ 2.07
SIX3-201ENST00000260653 PTCD1O75127 700 aaKnown RBP27.97■■■□□ 2.07
SIX3-201ENST00000260653 DCTPP1Q9H773 170 aa27.97■■■□□ 2.07
SIX3-201ENST00000260653 ITGB4P16144 1822 aa27.96■■■□□ 2.07
SIX3-201ENST00000260653 KAT6BQ8WYB5 2073 aa27.96■■■□□ 2.07
SIX3-201ENST00000260653 SPATA31A5Q5VU36 1347 aa27.96■■■□□ 2.07
SIX3-201ENST00000260653 SPATA31A7Q8IWB4 1347 aa27.96■■■□□ 2.07
SIX3-201ENST00000260653 THRAP3Q9Y2W1 955 aaKnown RBP27.95■■■□□ 2.07
SIX3-201ENST00000260653 UBTFL1P0CB47 393 aaPredicted RBP27.95■■■□□ 2.06
SIX3-201ENST00000260653 LRP10Q7Z4F1 713 aa27.95■■■□□ 2.06
SIX3-201ENST00000260653 LRRFIP2Q9Y608 721 aaKnown RBP27.95■■■□□ 2.06
SIX3-201ENST00000260653 XAGE3Q8WTP9 111 aa27.94■■■□□ 2.06
SIX3-201ENST00000260653 PIGBQ92521 554 aa27.94■■■□□ 2.06
SIX3-201ENST00000260653 DDX58O95786 925 aaKnown RBP27.94■■■□□ 2.06
SIX3-201ENST00000260653 CDCA7Q9BWT1 371 aaPredicted RBP27.94■■■□□ 2.06
SIX3-201ENST00000260653 CCDC9Q9Y3X0 531 aaKnown RBP27.94■■■□□ 2.06
SIX3-201ENST00000260653 C8orf37Q96NL8 207 aa27.93■■■□□ 2.06
SIX3-201ENST00000260653 COPS6Q7L5N1 327 aa27.92■■■□□ 2.06
SIX3-201ENST00000260653 LRP6O75581 1613 aa27.92■■■□□ 2.06
SIX3-201ENST00000260653 HMMRO75330 724 aa27.92■■■□□ 2.06
SIX3-201ENST00000260653 NBPF7P0C2Y1 421 aaPredicted RBP27.91■■■□□ 2.06
SIX3-201ENST00000260653 ASAP1Q9ULH1 1129 aa27.91■■■□□ 2.06
SIX3-201ENST00000260653 DDB1Q16531 1140 aa27.9■■■□□ 2.06
SIX3-201ENST00000260653 CWF19L2Q2TBE0 894 aaKnown RBP27.9■■■□□ 2.06
SIX3-201ENST00000260653 PNMA6EA0A0J9YXQ4 647 aa27.89■■■□□ 2.06
SIX3-201ENST00000260653 RIC3Q7Z5B4 369 aa27.89■■■□□ 2.06
SIX3-201ENST00000260653 UNC5CLQ8IV45 518 aa27.89■■■□□ 2.06
SIX3-201ENST00000260653 NGLY1Q96IV0 654 aa27.89■■■□□ 2.06
SIX3-201ENST00000260653 BCL9O00512 1426 aa27.89■■■□□ 2.05
SIX3-201ENST00000260653 NBPF26B4DH59 902 aa27.88■■■□□ 2.05
SIX3-201ENST00000260653 ALDH1L1O75891 902 aa27.88■■■□□ 2.05
SIX3-201ENST00000260653 ATP8B2P98198 1209 aa27.88■■■□□ 2.05
SIX3-201ENST00000260653 NBPF14Q5TI25 921 aa27.88■■■□□ 2.05
SIX3-201ENST00000260653 NBPF10Q6P3W6 841 aaKnown RBP27.88■■■□□ 2.05
SIX3-201ENST00000260653 NBPF15Q8N660 670 aa27.88■■■□□ 2.05
SIX3-201ENST00000260653 BCL9LQ86UU0 1499 aa27.87■■■□□ 2.05
SIX3-201ENST00000260653 ATG3Q9NT62 314 aa27.87■■■□□ 2.05
SIX3-201ENST00000260653 DOT1LQ8TEK3 1739 aa27.87■■■□□ 2.05
SIX3-201ENST00000260653 LINS1Q8NG48 757 aa27.87■■■□□ 2.05
SIX3-201ENST00000260653 BARGINQ6ZT62 677 aa27.86■■■□□ 2.05
SIX3-201ENST00000260653 NPM2Q86SE8 214 aaKnown RBP27.86■■■□□ 2.05
SIX3-201ENST00000260653 ERBB4Q15303 1308 aa27.86■■■□□ 2.05
SIX3-201ENST00000260653 APBB1O00213 710 aa27.86■■■□□ 2.05
SIX3-201ENST00000260653 SYTL4Q96C24 671 aaPredicted RBP27.86■■■□□ 2.05
SIX3-201ENST00000260653 A1BGP04217 495 aa27.85■■■□□ 2.05
SIX3-201ENST00000260653 ANKRD13DQ6ZTN6 518 aa27.85■■■□□ 2.05
SIX3-201ENST00000260653 SPATA31A6Q5VVP1 1343 aa27.84■■■□□ 2.05
SIX3-201ENST00000260653 IGKV5-2P06315 115 aa27.83■■■□□ 2.05
SIX3-201ENST00000260653 C9orf78Q9NZ63 289 aaPredicted RBP27.83■■■□□ 2.05
SIX3-201ENST00000260653 PRIM1P49642 420 aaKnown RBP27.82■■■□□ 2.04
SIX3-201ENST00000260653 MARCH10Q8NA82 808 aaPredicted RBP27.82■■■□□ 2.04
SIX3-201ENST00000260653 METTL22Q9BUU2 404 aaPredicted RBP27.82■■■□□ 2.04
SIX3-201ENST00000260653 EXOC6BQ9Y2D4 811 aa27.82■■■□□ 2.04
SIX3-201ENST00000260653 ARFGEF2Q9Y6D5 1785 aa27.82■■■□□ 2.04
SIX3-201ENST00000260653 SMARCA5O60264 1052 aaPredicted RBP27.82■■■□□ 2.04
SIX3-201ENST00000260653 MYD88Q99836 296 aa27.82■■■□□ 2.04
SIX3-201ENST00000260653 RBM42Q9BTD8 480 aaKnown RBP27.82■■■□□ 2.04
SIX3-201ENST00000260653 HSPA1LP34931 641 aa27.81■■■□□ 2.04
SIX3-201ENST00000260653 ANP32AP39687 249 aaKnown RBP27.81■■■□□ 2.04
SIX3-201ENST00000260653 NEXNQ0ZGT2 675 aa27.81■■■□□ 2.04
SIX3-201ENST00000260653 VPS72Q15906 364 aa27.81■■■□□ 2.04
SIX3-201ENST00000260653 FNBP4Q8N3X1 1017 aaPredicted RBP27.81■■■□□ 2.04
SIX3-201ENST00000260653 ZBTB47Q9UFB7 747 aaPredicted RBP27.81■■■□□ 2.04
SIX3-201ENST00000260653 FAM98CQ17RN3 349 aaKnown RBP27.8■■■□□ 2.04
SIX3-201ENST00000260653 PPP1R42Q7Z4L9 355 aa27.8■■■□□ 2.04
SIX3-201ENST00000260653 DNAJC10Q8IXB1 793 aa27.8■■■□□ 2.04
SIX3-201ENST00000260653 NEURL1BA8MQ27 555 aa27.79■■■□□ 2.04
SIX3-201ENST00000260653 C16orf71Q8IYS4 520 aaPredicted RBP27.79■■■□□ 2.04
SIX3-201ENST00000260653 VSIG10Q8N0Z9 540 aa27.79■■■□□ 2.04
SIX3-201ENST00000260653 SSH3Q8TE77 659 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms