RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
THSD1-201ENST00000258613 IL25Q9H293 177 aa16.16■□□□□ 0.18
THSD1-201ENST00000258613 CADPS2Q86UW7 1296 aa16.15■□□□□ 0.18
THSD1-201ENST00000258613 ZNF496Q96IT1 587 aaPredicted RBP16.15■□□□□ 0.18
THSD1-201ENST00000258613 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
THSD1-201ENST00000258613 IBTKQ9P2D0 1353 aaPredicted RBP16.15■□□□□ 0.18
THSD1-201ENST00000258613 ZNF790Q6PG37 636 aa16.15■□□□□ 0.18
THSD1-201ENST00000258613 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
THSD1-201ENST00000258613 NPHP3Q7Z494 1330 aa16.15■□□□□ 0.18
THSD1-201ENST00000258613 PHKG2P15735 406 aa16.14■□□□□ 0.17
THSD1-201ENST00000258613 TATP17735 454 aaPredicted RBP16.14■□□□□ 0.17
THSD1-201ENST00000258613 C9orf78Q9NZ63 289 aaPredicted RBP16.14■□□□□ 0.17
THSD1-201ENST00000258613 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.14■□□□□ 0.17
THSD1-201ENST00000258613 KDM3BQ7LBC6 1761 aa16.14■□□□□ 0.17
THSD1-201ENST00000258613 SSH3Q8TE77 659 aa16.14■□□□□ 0.17
THSD1-201ENST00000258613 LMO7Q8WWI1 1683 aa16.14■□□□□ 0.17
THSD1-201ENST00000258613 SALL3Q9BXA9 1300 aa16.14■□□□□ 0.17
THSD1-201ENST00000258613 KDM6AO15550 1401 aaPredicted RBP16.14■□□□□ 0.17
THSD1-201ENST00000258613 PDIA6Q15084 440 aa16.14■□□□□ 0.17
THSD1-201ENST00000258613 KAT6BQ8WYB5 2073 aa16.13■□□□□ 0.17
THSD1-201ENST00000258613 KLHDC4Q8TBB5 520 aa16.13■□□□□ 0.17
THSD1-201ENST00000258613 SLC52A2Q9HAB3 445 aa16.13■□□□□ 0.17
THSD1-201ENST00000258613 CHMP5Q9NZZ3 219 aa16.12■□□□□ 0.17
THSD1-201ENST00000258613 ALS2Q96Q42 1657 aa16.12■□□□□ 0.17
THSD1-201ENST00000258613 SPATA31A3Q5VYP0 1347 aa16.12■□□□□ 0.17
THSD1-201ENST00000258613 NOL8Q76FK4 1167 aaKnown RBP16.12■□□□□ 0.17
THSD1-201ENST00000258613 RHPN1Q8TCX5 695 aa16.12■□□□□ 0.17
THSD1-201ENST00000258613 SNX21Q969T3 373 aa16.11■□□□□ 0.17
THSD1-201ENST00000258613 STRN4Q9NRL3 753 aa16.11■□□□□ 0.17
THSD1-201ENST00000258613 PHRF1Q9P1Y6 1649 aaKnown RBP16.11■□□□□ 0.17
THSD1-201ENST00000258613 OS9Q13438 667 aaPredicted RBP16.11■□□□□ 0.17
THSD1-201ENST00000258613 KSR2Q6VAB6 950 aa16.11■□□□□ 0.17
THSD1-201ENST00000258613 PRDM11Q9NQV5 511 aa16.11■□□□□ 0.17
THSD1-201ENST00000258613 K7ELQ4 463 aaPredicted RBP16.11■□□□□ 0.17
THSD1-201ENST00000258613 COPS6Q7L5N1 327 aa16.11■□□□□ 0.17
THSD1-201ENST00000258613 XAGE3Q8WTP9 111 aa16.11■□□□□ 0.17
THSD1-201ENST00000258613 PALD1Q9ULE6 856 aa16.11■□□□□ 0.17
THSD1-201ENST00000258613 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
THSD1-201ENST00000258613 HOXB7P09629 217 aa16.1■□□□□ 0.17
THSD1-201ENST00000258613 SIL1Q9H173 461 aa16.1■□□□□ 0.17
THSD1-201ENST00000258613 OSBPL3Q9H4L5 887 aa16.1■□□□□ 0.17
THSD1-201ENST00000258613 BRPF3Q9ULD4 1205 aa16.1■□□□□ 0.17
THSD1-201ENST00000258613 MCM4P33991 863 aa16.1■□□□□ 0.17
THSD1-201ENST00000258613 POLA2Q14181 598 aa16.1■□□□□ 0.17
THSD1-201ENST00000258613 KAZALD1Q96I82 304 aa16.1■□□□□ 0.17
THSD1-201ENST00000258613 KDM4FA0A1W2PPD8 638 aa16.09■□□□□ 0.17
THSD1-201ENST00000258613 RIC3Q7Z5B4 369 aa16.09■□□□□ 0.17
THSD1-201ENST00000258613 SUCLG2Q96I99 432 aa16.09■□□□□ 0.17
THSD1-201ENST00000258613 SPG7Q9UQ90 795 aa16.09■□□□□ 0.17
THSD1-201ENST00000258613 ERC2O15083 957 aa16.09■□□□□ 0.17
THSD1-201ENST00000258613 CASC1Q6TDU7 716 aa16.09■□□□□ 0.17
THSD1-201ENST00000258613 TOM1L2Q6ZVM7 507 aa16.09■□□□□ 0.17
THSD1-201ENST00000258613 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
THSD1-201ENST00000258613 ANO2Q9NQ90 1003 aa16.09■□□□□ 0.17
THSD1-201ENST00000258613 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
THSD1-201ENST00000258613 IGKV5-2P06315 115 aa16.08■□□□□ 0.17
THSD1-201ENST00000258613 DDX54Q8TDD1 881 aaKnown RBP16.08■□□□□ 0.17
THSD1-201ENST00000258613 TNPO1Q92973 898 aaKnown RBP16.08■□□□□ 0.17
THSD1-201ENST00000258613 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.17
THSD1-201ENST00000258613 ATP5J2-PTCD1G3V325 749 aa16.08■□□□□ 0.16
THSD1-201ENST00000258613 PTCD1O75127 700 aaKnown RBP16.08■□□□□ 0.16
THSD1-201ENST00000258613 CHMLP26374 656 aa16.08■□□□□ 0.16
THSD1-201ENST00000258613 DDIT3P35638 169 aa16.08■□□□□ 0.16
THSD1-201ENST00000258613 PKP1Q13835 747 aa16.08■□□□□ 0.16
THSD1-201ENST00000258613 CHAMP1Q96JM3 812 aa16.08■□□□□ 0.16
THSD1-201ENST00000258613 SLAIN2Q9P270 581 aa16.08■□□□□ 0.16
THSD1-201ENST00000258613 KIF1AQ12756 1690 aa16.08■□□□□ 0.16
THSD1-201ENST00000258613 DTNBO60941 627 aa16.08■□□□□ 0.16
THSD1-201ENST00000258613 BICC1Q9H694 974 aaKnown RBP16.08■□□□□ 0.16
THSD1-201ENST00000258613 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.16
THSD1-201ENST00000258613 MYD88Q99836 296 aa16.07■□□□□ 0.16
THSD1-201ENST00000258613 ESYT1Q9BSJ8 1104 aa16.07■□□□□ 0.16
THSD1-201ENST00000258613 SSFA2P28290 1259 aa16.07■□□□□ 0.16
THSD1-201ENST00000258613 EPHA10Q5JZY3 1008 aa16.07■□□□□ 0.16
THSD1-201ENST00000258613 ZGPATQ8N5A5 531 aaKnown RBP16.07■□□□□ 0.16
THSD1-201ENST00000258613 CABP4P57796 275 aa16.06■□□□□ 0.16
THSD1-201ENST00000258613 HYPKQ9NX55 129 aa16.06■□□□□ 0.16
THSD1-201ENST00000258613 TTC5Q8N0Z6 440 aa16.06■□□□□ 0.16
THSD1-201ENST00000258613 PI4K2BQ8TCG2 481 aa16.05■□□□□ 0.16
THSD1-201ENST00000258613 COL18A1P39060 1754 aa16.05■□□□□ 0.16
THSD1-201ENST00000258613 PXDNLA1KZ92 1463 aa16.05■□□□□ 0.16
THSD1-201ENST00000258613 GRM8O00222 908 aa16.05■□□□□ 0.16
THSD1-201ENST00000258613 REC8O95072 547 aa16.05■□□□□ 0.16
THSD1-201ENST00000258613 FOXD4L5Q5VV16 416 aaPredicted RBP16.05■□□□□ 0.16
THSD1-201ENST00000258613 FOXD4L4Q8WXT5 416 aaPredicted RBP16.05■□□□□ 0.16
THSD1-201ENST00000258613 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
THSD1-201ENST00000258613 NCOA3Q9Y6Q9 1424 aa16.05■□□□□ 0.16
THSD1-201ENST00000258613 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
THSD1-201ENST00000258613 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
THSD1-201ENST00000258613 NEK4P51957 841 aa16.04■□□□□ 0.16
THSD1-201ENST00000258613 RABEP1Q15276 862 aa16.04■□□□□ 0.16
THSD1-201ENST00000258613 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
THSD1-201ENST00000258613 KIF1BPQ96EK5 621 aa16.04■□□□□ 0.16
THSD1-201ENST00000258613 CCDC8Q9H0W5 538 aaPredicted RBP16.04■□□□□ 0.16
THSD1-201ENST00000258613 STAP2Q9UGK3 403 aa16.04■□□□□ 0.16
THSD1-201ENST00000258613 C5P01031 1676 aa16.03■□□□□ 0.16
THSD1-201ENST00000258613 LINS1Q8NG48 757 aa16.03■□□□□ 0.16
THSD1-201ENST00000258613 DCAF5Q96JK2 942 aa16.03■□□□□ 0.16
THSD1-201ENST00000258613 TLR7Q9NYK1 1049 aaKnown RBP16.03■□□□□ 0.16
THSD1-201ENST00000258613 CCDC9Q9Y3X0 531 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms