RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 SIL1Q9H173 461 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 MX1P20591 662 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 ANAPC15P60006 121 aa5.57□□□□□ -1.52
RC3H1-201ENST00000258349 PRG4Q92954 1404 aaPredicted RBP5.57□□□□□ -1.52
RC3H1-201ENST00000258349 CABP4P57796 275 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 KIF1BPQ96EK5 621 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 RAB34Q9BZG1 259 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 MAP2P11137 1827 aaKnown RBP5.56□□□□□ -1.52
RC3H1-201ENST00000258349 PTPRCP08575 1304 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 IVLP07476 585 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 TUBB4BP68371 445 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 PRAM1Q96QH2 718 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 AKAP2Q9Y2D5 859 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 DUOX2Q9NRD8 1548 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 YEATS4O95619 227 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 SPECC1LQ69YQ0 1117 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 PPM1EQ8WY54 764 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 SLFN5Q08AF3 891 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 NFE2L2Q16236 605 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 CCDC178Q5BJE1 867 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 DDX19AQ9NUU7 478 aaKnown RBP5.56□□□□□ -1.52
RC3H1-201ENST00000258349 NAIPQ13075 1403 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 ANKRD18BA2A2Z9 1011 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 GLRX3O76003 335 aaKnown RBP5.56□□□□□ -1.52
RC3H1-201ENST00000258349 CCDC175P0C221 793 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 PPP4R3BQ5MIZ7 849 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 RAI14Q9P0K7 980 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 MYH11P35749 1972 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 UVSSAQ2YD98 709 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 GOPCQ9HD26 462 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 ARHGEF11O15085 1522 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 SSR1P43307 286 aaKnown RBP5.56□□□□□ -1.52
RC3H1-201ENST00000258349 AEBP2Q6ZN18 517 aaPredicted RBP5.56□□□□□ -1.52
RC3H1-201ENST00000258349 TIGD1Q96MW7 591 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 ZNF76P36508 570 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 UBE2HP62256 183 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 ANKS4BQ8N8V4 417 aa5.56□□□□□ -1.52
RC3H1-201ENST00000258349 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.56□□□□□ -1.52
RC3H1-201ENST00000258349 GNAT3A8MTJ3 354 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 KANK3Q6NY19 840 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 HOOK3Q86VS8 718 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 TMEM57Q8N5G2 664 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 SCAF11Q99590 1463 aaKnown RBP5.55□□□□□ -1.52
RC3H1-201ENST00000258349 TMEM266Q2M3C6 531 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 AIDAQ96BJ3 306 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 C8orf76Q96K31 380 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 CEP135Q66GS9 1140 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 POGZQ7Z3K3 1410 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 SNW1Q13573 536 aaKnown RBP5.55□□□□□ -1.52
RC3H1-201ENST00000258349 NUTM2GQ5VZR2 741 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 SULT6B1Q6IMI4 303 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 C16orf45Q96MC5 204 aaPredicted RBP5.55□□□□□ -1.52
RC3H1-201ENST00000258349 LIMCH1Q9UPQ0 1083 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 NEBLO76041 1014 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 CKAP4Q07065 602 aaKnown RBP5.55□□□□□ -1.52
RC3H1-201ENST00000258349 IFI16Q16666 785 aaKnown RBP5.55□□□□□ -1.52
RC3H1-201ENST00000258349 ZNF530Q6P9A1 599 aaPredicted RBP5.55□□□□□ -1.52
RC3H1-201ENST00000258349 RPAP2Q8IXW5 612 aaPredicted RBP5.55□□□□□ -1.52
RC3H1-201ENST00000258349 CEP112Q8N8E3 955 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 TMEM132EQ6IEE7 984 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 PPP4R3AQ6IN85 833 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 CACNA2D4Q7Z3S7 1137 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 SREK1Q8WXA9 508 aaKnown RBP5.55□□□□□ -1.52
RC3H1-201ENST00000258349 EHMT1Q9H9B1 1298 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 TNNT1P13805 278 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 PAFAH1B1P43034 410 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 ZMYM4Q5VZL5 1548 aa5.55□□□□□ -1.52
RC3H1-201ENST00000258349 ADCY5O95622 1261 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 TMPOP42166 694 aaKnown RBP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 SSRP1Q08945 709 aaKnown RBP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 RNF187Q5TA31 235 aaPredicted RBP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 TNPO1Q92973 898 aaKnown RBP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 HMG20BQ9P0W2 317 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 KRT222Q8N1A0 295 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 NSRP1Q9H0G5 558 aaKnown RBP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 SSBP05455 408 aaKnown RBP eCLIP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 CBX1P83916 185 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 RPRD2Q5VT52 1461 aaKnown RBP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 UGGT2Q9NYU1 1516 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 MYH3P11055 1940 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 MYH15Q9Y2K3 1946 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 NBPF1Q3BBV0 1214 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 STMN4Q9H169 189 aaPredicted RBP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 ARHGEF12Q9NZN5 1544 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 IGHMBP2P38935 993 aaKnown RBP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 KIF4BQ2VIQ3 1234 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 SLC52A1Q9NWF4 448 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 GSTTP1A0A1W2PQM5 241 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 GOLIM4O00461 696 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 HSF2BPO75031 334 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 KIF20AO95235 890 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 MYL6BP14649 208 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 CCDC113Q9H0I3 377 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 TTC12Q9H892 705 aaPredicted RBP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 TUBB4AP04350 444 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 LRP2BPQ9P2M1 347 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 CETN1Q12798 172 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 C6orf163Q5TEZ5 329 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 RASAL2Q9UJF2 1139 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms