RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 AMOTL2Q9Y2J4 779 aa18.96■□□□□ 0.63
SLC6A8-201ENST00000253122 HTATSF1O43719 755 aaKnown RBP18.96■□□□□ 0.63
SLC6A8-201ENST00000253122 PDLIM2Q96JY6 352 aa18.96■□□□□ 0.63
SLC6A8-201ENST00000253122 JAKMIP1Q96N16 626 aaKnown RBP18.96■□□□□ 0.63
SLC6A8-201ENST00000253122 SPG7Q9UQ90 795 aa18.96■□□□□ 0.63
SLC6A8-201ENST00000253122 U2AF2P26368 475 aaKnown RBP eCLIP18.95■□□□□ 0.62
SLC6A8-201ENST00000253122 UBE2HP62256 183 aa18.95■□□□□ 0.62
SLC6A8-201ENST00000253122 NUP62CLQ9H1M0 184 aa18.95■□□□□ 0.62
SLC6A8-201ENST00000253122 CNTROBQ8N137 903 aa18.95■□□□□ 0.62
SLC6A8-201ENST00000253122 CCDC61Q9Y6R9 512 aa18.95■□□□□ 0.62
SLC6A8-201ENST00000253122 BRD1O95696 1058 aa18.95■□□□□ 0.62
SLC6A8-201ENST00000253122 STK3Q13188 491 aa18.95■□□□□ 0.62
SLC6A8-201ENST00000253122 ERICH4A6NGS2 130 aa18.94■□□□□ 0.62
SLC6A8-201ENST00000253122 GPATCH3Q96I76 525 aa18.94■□□□□ 0.62
SLC6A8-201ENST00000253122 TNNT1P13805 278 aa18.94■□□□□ 0.62
SLC6A8-201ENST00000253122 KRT85P78386 507 aa18.94■□□□□ 0.62
SLC6A8-201ENST00000253122 PALD1Q9ULE6 856 aa18.94■□□□□ 0.62
SLC6A8-201ENST00000253122 FILIP1Q7Z7B0 1213 aa18.94■□□□□ 0.62
SLC6A8-201ENST00000253122 SRCIN1Q9C0H9 1055 aa18.94■□□□□ 0.62
SLC6A8-201ENST00000253122 ZDHHC9Q9Y397 364 aa18.94■□□□□ 0.62
SLC6A8-201ENST00000253122 TBX22Q9Y458 520 aa18.94■□□□□ 0.62
SLC6A8-201ENST00000253122 MAP3K11Q16584 847 aa18.93■□□□□ 0.62
SLC6A8-201ENST00000253122 SIRT1Q96EB6 747 aa18.93■□□□□ 0.62
SLC6A8-201ENST00000253122 CCDC9Q9Y3X0 531 aaKnown RBP18.93■□□□□ 0.62
SLC6A8-201ENST00000253122 KDM4AO75164 1064 aa18.93■□□□□ 0.62
SLC6A8-201ENST00000253122 ZSCAN22P10073 491 aaPredicted RBP18.93■□□□□ 0.62
SLC6A8-201ENST00000253122 DNM1Q05193 864 aaKnown RBP18.93■□□□□ 0.62
SLC6A8-201ENST00000253122 TFIP11Q9UBB9 837 aaKnown RBP18.93■□□□□ 0.62
SLC6A8-201ENST00000253122 DLC1Q96QB1 1528 aa18.93■□□□□ 0.62
SLC6A8-201ENST00000253122 RIOK3O14730 519 aaKnown RBP18.93■□□□□ 0.62
SLC6A8-201ENST00000253122 BCL2L12Q9HB09 334 aa18.93■□□□□ 0.62
SLC6A8-201ENST00000253122 IFIT2P09913 472 aaKnown RBP18.92■□□□□ 0.62
SLC6A8-201ENST00000253122 CCDC186Q7Z3E2 898 aa18.92■□□□□ 0.62
SLC6A8-201ENST00000253122 AEBP1Q8IUX7 1158 aa18.92■□□□□ 0.62
SLC6A8-201ENST00000253122 LIMCH1Q9UPQ0 1083 aa18.92■□□□□ 0.62
SLC6A8-201ENST00000253122 LRRFIP2Q9Y608 721 aaKnown RBP18.92■□□□□ 0.62
SLC6A8-201ENST00000253122 CYP46A1Q9Y6A2 500 aa18.92■□□□□ 0.62
SLC6A8-201ENST00000253122 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
SLC6A8-201ENST00000253122 PDRG1Q9NUG6 133 aa18.92■□□□□ 0.62
SLC6A8-201ENST00000253122 CPA1P15085 419 aa18.91■□□□□ 0.62
SLC6A8-201ENST00000253122 PTGS1P23219 599 aa18.91■□□□□ 0.62
SLC6A8-201ENST00000253122 TNNT3P45378 269 aaPredicted RBP18.91■□□□□ 0.62
SLC6A8-201ENST00000253122 CLEC17AQ6ZS10 378 aa18.91■□□□□ 0.62
SLC6A8-201ENST00000253122 ABCC4O15439 1325 aa18.91■□□□□ 0.62
SLC6A8-201ENST00000253122 NCOA3Q9Y6Q9 1424 aa18.91■□□□□ 0.62
SLC6A8-201ENST00000253122 UBR1Q8IWV7 1749 aa18.91■□□□□ 0.62
SLC6A8-201ENST00000253122 C3P01024 1663 aa18.9■□□□□ 0.62
SLC6A8-201ENST00000253122 FAM135BQ49AJ0 1406 aa18.9■□□□□ 0.62
SLC6A8-201ENST00000253122 SRGAP3O43295 1099 aa18.9■□□□□ 0.62
SLC6A8-201ENST00000253122 GJB2P29033 226 aa18.9■□□□□ 0.62
SLC6A8-201ENST00000253122 PRPF40BQ6NWY9 871 aaKnown RBP18.9■□□□□ 0.62
SLC6A8-201ENST00000253122 HOMER1Q86YM7 354 aa18.9■□□□□ 0.62
SLC6A8-201ENST00000253122 CHMLP26374 656 aa18.9■□□□□ 0.62
SLC6A8-201ENST00000253122 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.9■□□□□ 0.628e-8■■■■□ 21.5
SLC6A8-201ENST00000253122 V9GYY5 206 aaPredicted RBP18.9■□□□□ 0.62
SLC6A8-201ENST00000253122 INTS4Q96HW7 963 aaKnown RBP18.89■□□□□ 0.62
SLC6A8-201ENST00000253122 GORABQ5T7V8 394 aa18.89■□□□□ 0.61
SLC6A8-201ENST00000253122 CCDC30Q5VVM6 783 aa18.89■□□□□ 0.61
SLC6A8-201ENST00000253122 NECAB1Q8N987 351 aa18.89■□□□□ 0.61
SLC6A8-201ENST00000253122 SPATA32Q96LK8 384 aa18.89■□□□□ 0.61
SLC6A8-201ENST00000253122 TRMT1Q9NXH9 659 aaKnown RBP18.89■□□□□ 0.61
SLC6A8-201ENST00000253122 SYT1P21579 422 aa18.88■□□□□ 0.61
SLC6A8-201ENST00000253122 GTPBP4Q9BZE4 634 aaKnown RBP18.88■□□□□ 0.61
SLC6A8-201ENST00000253122 C9orf78Q9NZ63 289 aaPredicted RBP18.88■□□□□ 0.61
SLC6A8-201ENST00000253122 NGDNQ8NEJ9 315 aaKnown RBP18.88■□□□□ 0.61
SLC6A8-201ENST00000253122 FMNL2Q96PY5 1086 aa18.88■□□□□ 0.61
SLC6A8-201ENST00000253122 MSH6P52701 1360 aa18.88■□□□□ 0.61
SLC6A8-201ENST00000253122 AK9Q5TCS8 1911 aa18.88■□□□□ 0.61
SLC6A8-201ENST00000253122 SF3A1Q15459 793 aaKnown RBP18.88■□□□□ 0.61
SLC6A8-201ENST00000253122 CLASRPQ8N2M8 674 aaKnown RBP18.88■□□□□ 0.61
SLC6A8-201ENST00000253122 TRERF1Q96PN7 1200 aa18.88■□□□□ 0.61
SLC6A8-201ENST00000253122 G2E3Q7L622 706 aa18.87■□□□□ 0.61
SLC6A8-201ENST00000253122 ROBO2Q9HCK4 1378 aa18.87■□□□□ 0.61
SLC6A8-201ENST00000253122 ADAMTS13Q76LX8 1427 aa18.87■□□□□ 0.61
SLC6A8-201ENST00000253122 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.87■□□□□ 0.61
SLC6A8-201ENST00000253122 RIMS1Q86UR5 1692 aaKnown RBP18.87■□□□□ 0.61
SLC6A8-201ENST00000253122 F13A1P00488 732 aa18.86■□□□□ 0.61
SLC6A8-201ENST00000253122 ANAPC15P60006 121 aa18.86■□□□□ 0.61
SLC6A8-201ENST00000253122 LUZP1Q86V48 1076 aa18.86■□□□□ 0.61
SLC6A8-201ENST00000253122 BBXQ8WY36 941 aaPredicted RBP18.86■□□□□ 0.61
SLC6A8-201ENST00000253122 PTPRCP08575 1304 aa18.86■□□□□ 0.61
SLC6A8-201ENST00000253122 CYP2E1P05181 493 aaPredicted RBP18.86■□□□□ 0.61
SLC6A8-201ENST00000253122 AK2P54819 239 aa18.86■□□□□ 0.61
SLC6A8-201ENST00000253122 TCEANC2Q96MN5 208 aa18.86■□□□□ 0.61
SLC6A8-201ENST00000253122 PDCP20941 246 aa18.86■□□□□ 0.61
SLC6A8-201ENST00000253122 FAM173BQ6P4H8 233 aa18.85■□□□□ 0.61
SLC6A8-201ENST00000253122 CLIP2Q9UDT6 1046 aa18.85■□□□□ 0.61
SLC6A8-201ENST00000253122 CCDC66A2RUB6 948 aa18.85■□□□□ 0.61
SLC6A8-201ENST00000253122 CCAR2Q8N163 923 aaKnown RBP18.85■□□□□ 0.61
SLC6A8-201ENST00000253122 DMTNQ08495 405 aa18.85■□□□□ 0.61
SLC6A8-201ENST00000253122 GNL2Q13823 731 aaKnown RBP18.85■□□□□ 0.61
SLC6A8-201ENST00000253122 ZBTB9Q96C00 473 aa18.84■□□□□ 0.61
SLC6A8-201ENST00000253122 PYCARDQ9ULZ3 195 aa18.84■□□□□ 0.61
SLC6A8-201ENST00000253122 HDGFL1Q5TGJ6 251 aa18.84■□□□□ 0.61
SLC6A8-201ENST00000253122 RNF20Q5VTR2 975 aa18.84■□□□□ 0.61
SLC6A8-201ENST00000253122 CCDC73Q6ZRK6 1079 aa18.84■□□□□ 0.61
SLC6A8-201ENST00000253122 ZNF165P49910 485 aa18.83■□□□□ 0.61
SLC6A8-201ENST00000253122 FLIIQ13045 1269 aa18.83■□□□□ 0.61
SLC6A8-201ENST00000253122 SDF4Q9BRK5 362 aa18.83■□□□□ 0.61
SLC6A8-201ENST00000253122 NCKAP5LQ9HCH0 1330 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms