RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 ESCO1Q5FWF5 840 aa23.03■■□□□ 1.28
SNX4-201ENST00000251775 CEMIPQ8WUJ3 1361 aa23.02■■□□□ 1.28
SNX4-201ENST00000251775 PSME1Q06323 249 aa23.02■■□□□ 1.28
SNX4-201ENST00000251775 ATP8B2P98198 1209 aa23.02■■□□□ 1.27
SNX4-201ENST00000251775 CCDC39Q9UFE4 941 aa23.02■■□□□ 1.27
SNX4-201ENST00000251775 ADGRL3Q9HAR2 1447 aa23.01■■□□□ 1.27
SNX4-201ENST00000251775 PHAXQ9H814 394 aaKnown RBP23.01■■□□□ 1.27
SNX4-201ENST00000251775 TUBGCP6Q96RT7 1819 aa23.01■■□□□ 1.27
SNX4-201ENST00000251775 ZBTB7CA1YPR0 619 aa23.01■■□□□ 1.27
SNX4-201ENST00000251775 HDGFL1Q5TGJ6 251 aa23.01■■□□□ 1.27
SNX4-201ENST00000251775 CASC1Q6TDU7 716 aa23.01■■□□□ 1.27
SNX4-201ENST00000251775 LGR6Q9HBX8 967 aa23.01■■□□□ 1.27
SNX4-201ENST00000251775 SALL3Q9BXA9 1300 aa23■■□□□ 1.27
SNX4-201ENST00000251775 DYNC1I1O14576 645 aa23■■□□□ 1.27
SNX4-201ENST00000251775 PRDM4Q9UKN5 801 aa23■■□□□ 1.27
SNX4-201ENST00000251775 USP44Q9H0E7 712 aa23■■□□□ 1.27
SNX4-201ENST00000251775 LRRFIP2Q9Y608 721 aaKnown RBP23■■□□□ 1.27
SNX4-201ENST00000251775 MED1Q15648 1581 aaPredicted RBP22.99■■□□□ 1.27
SNX4-201ENST00000251775 PXDNLA1KZ92 1463 aa22.99■■□□□ 1.27
SNX4-201ENST00000251775 TSHZ3Q63HK5 1081 aa22.99■■□□□ 1.27
SNX4-201ENST00000251775 LRRCC1Q9C099 1032 aa22.99■■□□□ 1.27
SNX4-201ENST00000251775 KDM3BQ7LBC6 1761 aa22.98■■□□□ 1.27
SNX4-201ENST00000251775 LRRC59Q96AG4 307 aaKnown RBP22.98■■□□□ 1.27
SNX4-201ENST00000251775 PHRF1Q9P1Y6 1649 aaKnown RBP22.97■■□□□ 1.27
SNX4-201ENST00000251775 REC8O95072 547 aa22.97■■□□□ 1.27
SNX4-201ENST00000251775 SASS6Q6UVJ0 657 aa22.97■■□□□ 1.27
SNX4-201ENST00000251775 KCNH5Q8NCM2 988 aa22.97■■□□□ 1.27
SNX4-201ENST00000251775 MBD3O95983 291 aa22.97■■□□□ 1.27
SNX4-201ENST00000251775 EIF4A1P60842 406 aaKnown RBP22.97■■□□□ 1.27
SNX4-201ENST00000251775 RNF214Q8ND24 703 aa22.97■■□□□ 1.27
SNX4-201ENST00000251775 FOXD4L5Q5VV16 416 aaPredicted RBP22.96■■□□□ 1.27
SNX4-201ENST00000251775 FOXD4L4Q8WXT5 416 aaPredicted RBP22.96■■□□□ 1.27
SNX4-201ENST00000251775 ERC2O15083 957 aa22.96■■□□□ 1.27
SNX4-201ENST00000251775 EIF2S2P20042 333 aaKnown RBP22.96■■□□□ 1.27
SNX4-201ENST00000251775 LMO7Q8WWI1 1683 aa22.95■■□□□ 1.26
SNX4-201ENST00000251775 KCNQ3O43525 872 aa22.95■■□□□ 1.26
SNX4-201ENST00000251775 ORAI2Q96SN7 254 aa22.95■■□□□ 1.26
SNX4-201ENST00000251775 MTERF4Q7Z6M4 381 aaKnown RBP22.95■■□□□ 1.26
SNX4-201ENST00000251775 UBTFL1P0CB47 393 aaPredicted RBP22.94■■□□□ 1.26
SNX4-201ENST00000251775 MX1P20591 662 aa22.93■■□□□ 1.26
SNX4-201ENST00000251775 PLEKHG5O94827 1062 aa22.93■■□□□ 1.26
SNX4-201ENST00000251775 TMX3Q96JJ7 454 aa22.93■■□□□ 1.26
SNX4-201ENST00000251775 BRD1O95696 1058 aa22.92■■□□□ 1.26
SNX4-201ENST00000251775 ZNF530Q6P9A1 599 aaPredicted RBP22.92■■□□□ 1.26
SNX4-201ENST00000251775 CHPF2Q9P2E5 772 aa22.91■■□□□ 1.26
SNX4-201ENST00000251775 GCP02774 474 aa22.91■■□□□ 1.26
SNX4-201ENST00000251775 AKAP4Q5JQC9 854 aa22.91■■□□□ 1.26
SNX4-201ENST00000251775 MPRIPQ6WCQ1 1025 aa22.91■■□□□ 1.26
SNX4-201ENST00000251775 SSH3Q8TE77 659 aa22.9■■□□□ 1.26
SNX4-201ENST00000251775 SRCIN1Q9C0H9 1055 aa22.9■■□□□ 1.26
SNX4-201ENST00000251775 ADAMTSL3P82987 1691 aa22.9■■□□□ 1.26
SNX4-201ENST00000251775 NPHP4O75161 1426 aaPredicted RBP22.9■■□□□ 1.26
SNX4-201ENST00000251775 NEK4P51957 841 aa22.9■■□□□ 1.26
SNX4-201ENST00000251775 ARHGEF25Q86VW2 580 aa22.9■■□□□ 1.26
SNX4-201ENST00000251775 TSPY26PQ9H489 355 aa22.9■■□□□ 1.26
SNX4-201ENST00000251775 HOXB7P09629 217 aa22.89■■□□□ 1.26
SNX4-201ENST00000251775 STAP2Q9UGK3 403 aa22.89■■□□□ 1.26
SNX4-201ENST00000251775 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.89■■□□□ 1.26
SNX4-201ENST00000251775 TEFQ10587 303 aa22.89■■□□□ 1.25
SNX4-201ENST00000251775 PLEKHO1Q53GL0 409 aaPredicted RBP22.89■■□□□ 1.25
SNX4-201ENST00000251775 PXDNQ92626 1479 aa22.89■■□□□ 1.25
SNX4-201ENST00000251775 SLIT3O75094 1523 aa22.89■■□□□ 1.25
SNX4-201ENST00000251775 BTBD11A6QL63 1104 aa22.88■■□□□ 1.25
SNX4-201ENST00000251775 ESYT1Q9BSJ8 1104 aa22.88■■□□□ 1.25
SNX4-201ENST00000251775 ANXA1P04083 346 aa22.88■■□□□ 1.25
SNX4-201ENST00000251775 KIAA2012Q0VF49 1180 aa22.88■■□□□ 1.25
SNX4-201ENST00000251775 CUL4AQ13619 759 aa22.88■■□□□ 1.25
SNX4-201ENST00000251775 PPP1R42Q7Z4L9 355 aa22.88■■□□□ 1.25
SNX4-201ENST00000251775 ARID3AQ99856 593 aa22.88■■□□□ 1.25
SNX4-201ENST00000251775 SMAP1Q8IYB5 467 aaPredicted RBP22.87■■□□□ 1.25
SNX4-201ENST00000251775 IL1RAPL2Q9NP60 686 aa22.87■■□□□ 1.25
SNX4-201ENST00000251775 PTMAP06454 111 aaKnown RBP22.87■■□□□ 1.25
SNX4-201ENST00000251775 NBPF7P0C2Y1 421 aaPredicted RBP22.87■■□□□ 1.25
SNX4-201ENST00000251775 NCAPD2Q15021 1401 aa22.87■■□□□ 1.25
SNX4-201ENST00000251775 PI4KAP2A4QPH2 592 aa22.86■■□□□ 1.25
SNX4-201ENST00000251775 POLA2Q14181 598 aa22.86■■□□□ 1.25
SNX4-201ENST00000251775 BEND3Q5T5X7 828 aa22.86■■□□□ 1.25
SNX4-201ENST00000251775 PI4KAP1Q8N8J0 262 aa22.86■■□□□ 1.25
SNX4-201ENST00000251775 RILPL2Q969X0 211 aa22.86■■□□□ 1.25
SNX4-201ENST00000251775 TRIM6-TRIM34B2RNG4 842 aa22.86■■□□□ 1.25
SNX4-201ENST00000251775 CHMLP26374 656 aa22.86■■□□□ 1.25
SNX4-201ENST00000251775 LMOD2Q6P5Q4 547 aa22.86■■□□□ 1.25
SNX4-201ENST00000251775 UNC5CLQ8IV45 518 aa22.86■■□□□ 1.25
SNX4-201ENST00000251775 DNAAF4Q8WXU2 420 aa22.86■■□□□ 1.25
SNX4-201ENST00000251775 RNMTO43148 476 aaKnown RBP22.85■■□□□ 1.25
SNX4-201ENST00000251775 MCM2P49736 904 aa22.85■■□□□ 1.25
SNX4-201ENST00000251775 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
SNX4-201ENST00000251775 ANKRD24Q8TF21 1146 aa22.85■■□□□ 1.25
SNX4-201ENST00000251775 TRPM3Q9HCF6 1732 aaPredicted RBP22.85■■□□□ 1.25
SNX4-201ENST00000251775 SURF6O75683 361 aaKnown RBP22.84■■□□□ 1.25
SNX4-201ENST00000251775 NUTM1Q86Y26 1132 aa22.84■■□□□ 1.25
SNX4-201ENST00000251775 MYRIPQ8NFW9 859 aa22.84■■□□□ 1.25
SNX4-201ENST00000251775 SYAP1Q96A49 352 aaPredicted RBP22.84■■□□□ 1.25
SNX4-201ENST00000251775 ADCY9O60503 1353 aa22.84■■□□□ 1.25
SNX4-201ENST00000251775 AXIN2Q9Y2T1 843 aa22.83■■□□□ 1.25
SNX4-201ENST00000251775 RGPD5Q99666 1765 aa22.83■■□□□ 1.25
SNX4-201ENST00000251775 SRGAP3O43295 1099 aa22.82■■□□□ 1.24
SNX4-201ENST00000251775 RAB11FIP3O75154 756 aa22.82■■□□□ 1.24
SNX4-201ENST00000251775 C1orf141Q5JVX7 400 aa22.82■■□□□ 1.24
SNX4-201ENST00000251775 INTS4Q96HW7 963 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms