RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 SMC2O95347 1197 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 SLC39A6Q13433 755 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 TBC1D9Q6ZT07 1266 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 CCDC82Q8N4S0 544 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 ZNF518AQ6AHZ1 1483 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 SAFBQ15424 915 aaKnown RBP eCLIP5.58□□□□□ -1.52
RAP1B-201ENST00000250559 CCDC144CPQ8IYA2 1237 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 ANKRD24Q8TF21 1146 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 FLIIQ13045 1269 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 FAM43AQ8N2R8 423 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 MPHOSPH8Q99549 860 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 HOOK1Q9UJC3 728 aaKnown RBP5.58□□□□□ -1.52
RAP1B-201ENST00000250559 KDM6BO15054 1643 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 CADPS2Q86UW7 1296 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 RAB11FIP4Q86YS3 637 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 PCDHB15Q9Y5E8 787 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 ABCC10Q5T3U5 1492 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 TPM1P09493 284 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 XBP1P17861 261 aa5.58□□□□□ -1.52
RAP1B-201ENST00000250559 MINDY4BA8MYZ0 360 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 ISM2Q6H9L7 571 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 OLFM4Q6UX06 510 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 SYCE3A1L190 88 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 LRP2BPQ9P2M1 347 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 ABCA5Q8WWZ7 1642 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 AFF2P51816 1311 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 GNPATO15228 680 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 STK38Q15208 465 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 JDP2Q8WYK2 163 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 CEP170Q5SW79 1584 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 LETM1O95202 739 aaPredicted RBP5.57□□□□□ -1.52
RAP1B-201ENST00000250559 HIP1O00291 1037 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 GDPD2Q9HCC8 539 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 NPATQ14207 1427 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 ANKRD36BQ8N2N9 1353 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 TTC21BQ7Z4L5 1316 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 DTNBO60941 627 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 NAP1L1P55209 391 aaKnown RBP5.57□□□□□ -1.52
RAP1B-201ENST00000250559 SCLT1Q96NL6 688 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.57□□□□□ -1.52
RAP1B-201ENST00000250559 A0A1W2PP64 1363 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 CCDC39Q9UFE4 941 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 KINO60870 393 aaKnown RBP5.57□□□□□ -1.52
RAP1B-201ENST00000250559 SSFA2P28290 1259 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 GOLIM4O00461 696 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 RLBP1P12271 317 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 ME1P48163 572 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 ZNF772Q68DY9 489 aaPredicted RBP5.57□□□□□ -1.52
RAP1B-201ENST00000250559 TMX1Q9H3N1 280 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 CT47B1P0C2W7 299 aaPredicted RBP5.57□□□□□ -1.52
RAP1B-201ENST00000250559 ALDH1L2Q3SY69 923 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 HSP90AB3PQ58FF7 597 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 KCNH5Q8NCM2 988 aa5.57□□□□□ -1.52
RAP1B-201ENST00000250559 LIG1P18858 919 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 NAT10Q9H0A0 1025 aaKnown RBP5.56□□□□□ -1.52
RAP1B-201ENST00000250559 TNMDQ9H2S6 317 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 POLKQ9UBT6 870 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 RIMS2Q9UQ26 1411 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 EIF4A2Q14240 407 aaKnown RBP5.56□□□□□ -1.52
RAP1B-201ENST00000250559 BLOC1S2Q6QNY1 142 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 TSPYL6Q8N831 410 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 MTHFSDQ2M296 383 aaKnown RBP5.56□□□□□ -1.52
RAP1B-201ENST00000250559 METTL24Q5JXM2 366 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 SPATA32Q96LK8 384 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 TBC1D2Q9BYX2 928 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 TDO2P48775 406 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 SNRKQ9NRH2 765 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 RAI14Q9P0K7 980 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 TNRQ92752 1358 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 ABCC1P33527 1531 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 CCDC43Q96MW1 224 aaKnown RBP5.56□□□□□ -1.52
RAP1B-201ENST00000250559 GRPEL1Q9HAV7 217 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 RBM27Q9P2N5 1060 aaKnown RBP5.56□□□□□ -1.52
RAP1B-201ENST00000250559 GJB2P29033 226 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 CCDC47Q96A33 483 aaKnown RBP5.56□□□□□ -1.52
RAP1B-201ENST00000250559 CDK5RAP3Q96JB5 506 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 TMOD2Q9NZR1 351 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 TRMT112Q9UI30 125 aaKnown RBP5.56□□□□□ -1.52
RAP1B-201ENST00000250559 CCNL1Q9UK58 526 aaPredicted RBP5.56□□□□□ -1.52
RAP1B-201ENST00000250559 SERPINC1P01008 464 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 A0A087WZG4 1122 aa5.56□□□□□ -1.52
RAP1B-201ENST00000250559 CCT2P78371 535 aaKnown RBP5.56□□□□□ -1.52
RAP1B-201ENST00000250559 PLEKHH1Q9ULM0 1364 aa5.55□□□□□ -1.52
RAP1B-201ENST00000250559 PHAXQ9H814 394 aaKnown RBP5.55□□□□□ -1.52
RAP1B-201ENST00000250559 STARD3NLO95772 234 aa5.55□□□□□ -1.52
RAP1B-201ENST00000250559 CCDC173Q0VFZ6 552 aa5.55□□□□□ -1.52
RAP1B-201ENST00000250559 LARP1Q6PKG0 1096 aaKnown RBP5.55□□□□□ -1.52
RAP1B-201ENST00000250559 UBE3BQ7Z3V4 1068 aa5.55□□□□□ -1.52
RAP1B-201ENST00000250559 POLR3DP05423 398 aaPredicted RBP5.55□□□□□ -1.52
RAP1B-201ENST00000250559 NUCB1Q02818 461 aa5.55□□□□□ -1.52
RAP1B-201ENST00000250559 PA2G4Q9UQ80 394 aaKnown RBP5.55□□□□□ -1.52
RAP1B-201ENST00000250559 PATL2C9JE40 543 aaKnown RBP5.55□□□□□ -1.52
RAP1B-201ENST00000250559 SLAIN2Q9P270 581 aa5.55□□□□□ -1.52
RAP1B-201ENST00000250559 DNAAF4Q8WXU2 420 aa5.55□□□□□ -1.52
RAP1B-201ENST00000250559 KRT18P05783 430 aaKnown RBP5.55□□□□□ -1.52
RAP1B-201ENST00000250559 MAP3K9P80192 1104 aa5.55□□□□□ -1.52
RAP1B-201ENST00000250559 SART3Q15020 963 aaKnown RBP5.55□□□□□ -1.52
RAP1B-201ENST00000250559 ANKRD20A12PQ8NF67 263 aa5.55□□□□□ -1.52
RAP1B-201ENST00000250559 KIF1BPQ96EK5 621 aa5.55□□□□□ -1.52
RAP1B-201ENST00000250559 PHACTR3Q96KR7 559 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 1362.8 ms