RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 LRRCC1Q9C099 1032 aa18.22■□□□□ 0.51
MBD4-201ENST00000249910 TOM1L2Q6ZVM7 507 aa18.21■□□□□ 0.51
MBD4-201ENST00000249910 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
MBD4-201ENST00000249910 SRGAP3O43295 1099 aa18.21■□□□□ 0.5
MBD4-201ENST00000249910 KIF2CQ99661 725 aa18.21■□□□□ 0.5
MBD4-201ENST00000249910 SURF6O75683 361 aaKnown RBP18.2■□□□□ 0.5
MBD4-201ENST00000249910 PDIA6Q15084 440 aa18.2■□□□□ 0.5
MBD4-201ENST00000249910 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
MBD4-201ENST00000249910 STRN4Q9NRL3 753 aa18.19■□□□□ 0.5
MBD4-201ENST00000249910 USP35Q9P2H5 1018 aa18.19■□□□□ 0.5
MBD4-201ENST00000249910 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
MBD4-201ENST00000249910 ANTXR1Q9H6X2 564 aa18.18■□□□□ 0.5
MBD4-201ENST00000249910 SOS2Q07890 1332 aaPredicted RBP18.18■□□□□ 0.5
MBD4-201ENST00000249910 KSR2Q6VAB6 950 aa18.18■□□□□ 0.5
MBD4-201ENST00000249910 SSH3Q8TE77 659 aa18.18■□□□□ 0.5
MBD4-201ENST00000249910 CHMP4AQ9BY43 222 aa18.18■□□□□ 0.5
MBD4-201ENST00000249910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.18■□□□□ 0.52e-6■■■□□ 15.3
MBD4-201ENST00000249910 CACNA1FO60840 1977 aa18.18■□□□□ 0.5
MBD4-201ENST00000249910 STRCQ7RTU9 1775 aa18.18■□□□□ 0.5
MBD4-201ENST00000249910 IBTKQ9P2D0 1353 aaPredicted RBP18.18■□□□□ 0.5
MBD4-201ENST00000249910 CD2BP2O95400 341 aaKnown RBP18.17■□□□□ 0.5
MBD4-201ENST00000249910 DCAF5Q96JK2 942 aa18.17■□□□□ 0.5
MBD4-201ENST00000249910 C9orf78Q9NZ63 289 aaPredicted RBP18.17■□□□□ 0.5
MBD4-201ENST00000249910 XIRP1Q702N8 1843 aaKnown RBP18.17■□□□□ 0.5
MBD4-201ENST00000249910 NUTM1Q86Y26 1132 aa18.16■□□□□ 0.5
MBD4-201ENST00000249910 DDX21Q9NR30 783 aaKnown RBP eCLIP18.16■□□□□ 0.5
MBD4-201ENST00000249910 CPDO75976 1380 aa18.16■□□□□ 0.5
MBD4-201ENST00000249910 COL18A1P39060 1754 aa18.16■□□□□ 0.5
MBD4-201ENST00000249910 CAMTA1Q9Y6Y1 1673 aa18.16■□□□□ 0.5
MBD4-201ENST00000249910 MX1P20591 662 aa18.16■□□□□ 0.5
MBD4-201ENST00000249910 HYPKQ9NX55 129 aa18.16■□□□□ 0.5
MBD4-201ENST00000249910 CABP4P57796 275 aa18.15■□□□□ 0.5
MBD4-201ENST00000249910 TTC5Q8N0Z6 440 aa18.15■□□□□ 0.5
MBD4-201ENST00000249910 OVOS2A0A0G2JMS6 1433 aa18.15■□□□□ 0.5
MBD4-201ENST00000249910 PXDNLA1KZ92 1463 aa18.15■□□□□ 0.5
MBD4-201ENST00000249910 DDX54Q8TDD1 881 aaKnown RBP18.15■□□□□ 0.5
MBD4-201ENST00000249910 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.5
MBD4-201ENST00000249910 COPS6Q7L5N1 327 aa18.14■□□□□ 0.5
MBD4-201ENST00000249910 HSCBQ8IWL3 235 aa18.14■□□□□ 0.5
MBD4-201ENST00000249910 OSBPL3Q9H4L5 887 aa18.14■□□□□ 0.5
MBD4-201ENST00000249910 SALL3Q9BXA9 1300 aa18.14■□□□□ 0.49
MBD4-201ENST00000249910 RIC3Q7Z5B4 369 aa18.14■□□□□ 0.49
MBD4-201ENST00000249910 WDR17Q8IZU2 1322 aa18.14■□□□□ 0.49
MBD4-201ENST00000249910 POLA2Q14181 598 aa18.13■□□□□ 0.49
MBD4-201ENST00000249910 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
MBD4-201ENST00000249910 RILPL2Q969X0 211 aa18.13■□□□□ 0.49
MBD4-201ENST00000249910 TRIM6-TRIM34B2RNG4 842 aa18.13■□□□□ 0.49
MBD4-201ENST00000249910 UNC5CLQ8IV45 518 aa18.13■□□□□ 0.49
MBD4-201ENST00000249910 USP26Q9BXU7 913 aa18.13■□□□□ 0.49
MBD4-201ENST00000249910 ZCRB1Q8TBF4 217 aaKnown RBP18.12■□□□□ 0.49
MBD4-201ENST00000249910 RHPN1Q8TCX5 695 aa18.12■□□□□ 0.49
MBD4-201ENST00000249910 JARID2Q92833 1246 aaPredicted RBP18.12■□□□□ 0.49
MBD4-201ENST00000249910 PA2G4Q9UQ80 394 aaKnown RBP18.12■□□□□ 0.49
MBD4-201ENST00000249910 MAP4K4O95819 1239 aaPredicted RBP18.12■□□□□ 0.49
MBD4-201ENST00000249910 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
MBD4-201ENST00000249910 IGKV5-2P06315 115 aa18.11■□□□□ 0.49
MBD4-201ENST00000249910 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
MBD4-201ENST00000249910 EVA1CP58658 441 aa18.11■□□□□ 0.49
MBD4-201ENST00000249910 DDX58O95786 925 aaKnown RBP18.1■□□□□ 0.49
MBD4-201ENST00000249910 CASC1Q6TDU7 716 aa18.1■□□□□ 0.49
MBD4-201ENST00000249910 LINS1Q8NG48 757 aa18.1■□□□□ 0.49
MBD4-201ENST00000249910 KAZALD1Q96I82 304 aa18.1■□□□□ 0.49
MBD4-201ENST00000249910 FMNL2Q96PY5 1086 aa18.1■□□□□ 0.49
MBD4-201ENST00000249910 GRM8O00222 908 aa18.09■□□□□ 0.49
MBD4-201ENST00000249910 PTCD1O75127 700 aaKnown RBP18.09■□□□□ 0.49
MBD4-201ENST00000249910 ALDH1L1O75891 902 aa18.09■□□□□ 0.49
MBD4-201ENST00000249910 OS9Q13438 667 aaPredicted RBP18.09■□□□□ 0.49
MBD4-201ENST00000249910 SUCLG2Q96I99 432 aa18.09■□□□□ 0.49
MBD4-201ENST00000249910 HSP90AB1P08238 724 aaKnown RBP18.09■□□□□ 0.49
MBD4-201ENST00000249910 MYD88Q99836 296 aa18.09■□□□□ 0.49
MBD4-201ENST00000249910 BICC1Q9H694 974 aaKnown RBP18.08■□□□□ 0.49
MBD4-201ENST00000249910 IL2RBP14784 551 aa18.08■□□□□ 0.48
MBD4-201ENST00000249910 ANKRD13DQ6ZTN6 518 aa18.08■□□□□ 0.48
MBD4-201ENST00000249910 LRP10Q7Z4F1 713 aa18.08■□□□□ 0.48
MBD4-201ENST00000249910 SNX21Q969T3 373 aa18.08■□□□□ 0.48
MBD4-201ENST00000249910 CRYBG1Q9Y4K1 1723 aa18.07■□□□□ 0.48
MBD4-201ENST00000249910 KLHDC4Q8TBB5 520 aa18.07■□□□□ 0.48
MBD4-201ENST00000249910 KIF1BPQ96EK5 621 aa18.07■□□□□ 0.48
MBD4-201ENST00000249910 COL5A2P05997 1499 aaPredicted RBP18.07■□□□□ 0.48
MBD4-201ENST00000249910 SIPA1L3O60292 1781 aaPredicted RBP18.07■□□□□ 0.48
MBD4-201ENST00000249910 ATP5J2-PTCD1G3V325 749 aa18.07■□□□□ 0.48
MBD4-201ENST00000249910 RAB11FIP3O75154 756 aa18.07■□□□□ 0.48
MBD4-201ENST00000249910 STAP2Q9UGK3 403 aa18.07■□□□□ 0.48
MBD4-201ENST00000249910 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.07■□□□□ 0.48
MBD4-201ENST00000249910 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
MBD4-201ENST00000249910 ERC2O15083 957 aa18.06■□□□□ 0.48
MBD4-201ENST00000249910 PCDH11XQ9BZA7 1347 aa18.06■□□□□ 0.48
MBD4-201ENST00000249910 PCDH11YQ9BZA8 1340 aa18.06■□□□□ 0.48
MBD4-201ENST00000249910 NEURL1BA8MQ27 555 aa18.06■□□□□ 0.48
MBD4-201ENST00000249910 IL25Q9H293 177 aa18.06■□□□□ 0.48
MBD4-201ENST00000249910 NEXNQ0ZGT2 675 aa18.05■□□□□ 0.48
MBD4-201ENST00000249910 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
MBD4-201ENST00000249910 CARD10Q9BWT7 1032 aa18.05■□□□□ 0.48
MBD4-201ENST00000249910 SIL1Q9H173 461 aa18.05■□□□□ 0.48
MBD4-201ENST00000249910 BTG4Q9NY30 223 aa18.05■□□□□ 0.48
MBD4-201ENST00000249910 SCN11AQ9UI33 1791 aa18.05■□□□□ 0.48
MBD4-201ENST00000249910 REC8O95072 547 aa18.04■□□□□ 0.48
MBD4-201ENST00000249910 HSP90AA1P07900 732 aaKnown RBP18.04■□□□□ 0.48
MBD4-201ENST00000249910 CHMLP26374 656 aa18.04■□□□□ 0.48
MBD4-201ENST00000249910 MTX1Q13505 466 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms