RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 THUMPD2Q9BTF0 503 aaKnown RBP31.98■■■□□ 2.71
SDF2L1-201ENST00000248958 MRS2Q9HD23 443 aa31.98■■■□□ 2.71
SDF2L1-201ENST00000248958 SOS1Q07889 1333 aaPredicted RBP31.98■■■□□ 2.71
SDF2L1-201ENST00000248958 SNRPA1P09661 255 aaKnown RBP31.97■■■□□ 2.71
SDF2L1-201ENST00000248958 NEUROD2Q15784 382 aa31.97■■■□□ 2.71
SDF2L1-201ENST00000248958 NLGN1Q8N2Q7 840 aa31.97■■■□□ 2.71
SDF2L1-201ENST00000248958 FHDC1Q9C0D6 1143 aaPredicted RBP31.97■■■□□ 2.71
SDF2L1-201ENST00000248958 BABAM1Q9NWV8 329 aa31.97■■■□□ 2.71
SDF2L1-201ENST00000248958 ZBTB1Q9Y2K1 713 aa31.96■■■□□ 2.71
SDF2L1-201ENST00000248958 RRP7AQ9Y3A4 280 aaKnown RBP31.96■■■□□ 2.71
SDF2L1-201ENST00000248958 SYT17Q9BSW7 474 aa31.95■■■□□ 2.71
SDF2L1-201ENST00000248958 MIS18AQ9NYP9 233 aa31.94■■■□□ 2.7
SDF2L1-201ENST00000248958 CANXP27824 592 aaKnown RBP31.92■■■□□ 2.7
SDF2L1-201ENST00000248958 USP42Q9H9J4 1324 aaKnown RBP31.92■■■□□ 2.7
SDF2L1-201ENST00000248958 COL15A1P39059 1388 aa31.92■■■□□ 2.7
SDF2L1-201ENST00000248958 A0A087WZG4 1122 aa31.91■■■□□ 2.7
SDF2L1-201ENST00000248958 GYS1P13807 737 aa31.91■■■□□ 2.7
SDF2L1-201ENST00000248958 TRIM35Q9UPQ4 493 aa31.91■■■□□ 2.7
SDF2L1-201ENST00000248958 LAMB4A4D0S4 1761 aa31.9■■■□□ 2.7
SDF2L1-201ENST00000248958 ZPR1O75312 459 aa31.9■■■□□ 2.7
SDF2L1-201ENST00000248958 TSPYL4Q9UJ04 414 aa31.9■■■□□ 2.7
SDF2L1-201ENST00000248958 USP16Q9Y5T5 823 aa31.9■■■□□ 2.7
SDF2L1-201ENST00000248958 APAF1O14727 1248 aa31.89■■■□□ 2.7
SDF2L1-201ENST00000248958 IL6STP40189 918 aaPredicted RBP31.89■■■□□ 2.7
SDF2L1-201ENST00000248958 EIF5P55010 431 aaKnown RBP31.89■■■□□ 2.7
SDF2L1-201ENST00000248958 EIF4A1P60842 406 aaKnown RBP31.89■■■□□ 2.7
SDF2L1-201ENST00000248958 DCAF8L1A6NGE4 600 aa31.88■■■□□ 2.69
SDF2L1-201ENST00000248958 NPM2Q86SE8 214 aaKnown RBP31.88■■■□□ 2.69
SDF2L1-201ENST00000248958 NARFQ9UHQ1 456 aa31.88■■■□□ 2.69
SDF2L1-201ENST00000248958 A1BGP04217 495 aa31.86■■■□□ 2.69
SDF2L1-201ENST00000248958 KLHL34Q8N239 644 aa31.86■■■□□ 2.69
SDF2L1-201ENST00000248958 MMP10P09238 476 aa31.85■■■□□ 2.69
SDF2L1-201ENST00000248958 SRP68Q9UHB9 627 aaKnown RBP31.85■■■□□ 2.69
SDF2L1-201ENST00000248958 CD2APQ9Y5K6 639 aa31.85■■■□□ 2.69
SDF2L1-201ENST00000248958 PRAMEF22A3QJZ6 481 aa31.84■■■□□ 2.69
SDF2L1-201ENST00000248958 GIGYF1O75420 1035 aaPredicted RBP31.84■■■□□ 2.69
SDF2L1-201ENST00000248958 CALD1Q05682 793 aaKnown RBP31.83■■■□□ 2.69
SDF2L1-201ENST00000248958 USPL1Q5W0Q7 1092 aa31.83■■■□□ 2.69
SDF2L1-201ENST00000248958 CHL1O00533 1208 aa31.81■■■□□ 2.68
SDF2L1-201ENST00000248958 PARP3Q9Y6F1 533 aa31.81■■■□□ 2.68
SDF2L1-201ENST00000248958 FKBP8Q14318 412 aa31.8■■■□□ 2.68
SDF2L1-201ENST00000248958 NCBP3Q53F19 620 aaKnown RBP31.79■■■□□ 2.68
SDF2L1-201ENST00000248958 ZNF330Q9Y3S2 320 aaPredicted RBP31.79■■■□□ 2.68
SDF2L1-201ENST00000248958 CFAP44Q96MT7 982 aa31.78■■■□□ 2.68
SDF2L1-201ENST00000248958 SCN7AQ01118 1682 aa31.77■■■□□ 2.68
SDF2L1-201ENST00000248958 LAS1LQ9Y4W2 734 aaKnown RBP31.77■■■□□ 2.68
SDF2L1-201ENST00000248958 TM4SF1P30408 202 aa31.76■■■□□ 2.67
SDF2L1-201ENST00000248958 CCDC27Q2M243 656 aa31.76■■■□□ 2.67
SDF2L1-201ENST00000248958 KIF13BQ9NQT8 1826 aa31.76■■■□□ 2.67
SDF2L1-201ENST00000248958 ERBB4Q15303 1308 aa31.75■■■□□ 2.67
SDF2L1-201ENST00000248958 BCL2L12Q9HB09 334 aa31.74■■■□□ 2.67
SDF2L1-201ENST00000248958 NBPF26B4DH59 902 aa31.73■■■□□ 2.67
SDF2L1-201ENST00000248958 NBPF10Q6P3W6 841 aaKnown RBP31.73■■■□□ 2.67
SDF2L1-201ENST00000248958 DZIP3Q86Y13 1208 aaKnown RBP31.73■■■□□ 2.67
SDF2L1-201ENST00000248958 NBPF15Q8N660 670 aa31.73■■■□□ 2.67
SDF2L1-201ENST00000248958 NLGN2Q8NFZ4 835 aa31.73■■■□□ 2.67
SDF2L1-201ENST00000248958 IFT57Q9NWB7 429 aa31.73■■■□□ 2.67
SDF2L1-201ENST00000248958 TBC1D2BQ9UPU7 963 aa31.73■■■□□ 2.67
SDF2L1-201ENST00000248958 BCORQ6W2J9 1755 aa31.73■■■□□ 2.67
SDF2L1-201ENST00000248958 GNAI1P63096 354 aa31.72■■■□□ 2.67
SDF2L1-201ENST00000248958 ZNF853P0CG23 659 aa31.71■■■□□ 2.67
SDF2L1-201ENST00000248958 PIP4K2AP48426 406 aaPredicted RBP31.71■■■□□ 2.67
SDF2L1-201ENST00000248958 RGL2O15211 777 aa31.7■■■□□ 2.67
SDF2L1-201ENST00000248958 FAM9BQ8IZU0 186 aa31.7■■■□□ 2.67
SDF2L1-201ENST00000248958 C10orf71Q711Q0 1435 aa31.69■■■□□ 2.66
SDF2L1-201ENST00000248958 POLRMTO00411 1230 aaKnown RBP31.69■■■□□ 2.66
SDF2L1-201ENST00000248958 CAMTA2O94983 1202 aa31.69■■■□□ 2.66
SDF2L1-201ENST00000248958 DDR1Q08345 913 aa31.69■■■□□ 2.66
SDF2L1-201ENST00000248958 NFIXQ14938 502 aa31.69■■■□□ 2.66
SDF2L1-201ENST00000248958 HOXB7P09629 217 aa31.68■■■□□ 2.66
SDF2L1-201ENST00000248958 CLEC4GQ6UXB4 293 aa31.68■■■□□ 2.66
SDF2L1-201ENST00000248958 TGFB2P61812 414 aa31.67■■■□□ 2.66
SDF2L1-201ENST00000248958 MBIPQ9NS73 344 aa31.67■■■□□ 2.66
SDF2L1-201ENST00000248958 ZNF652Q9Y2D9 606 aa31.67■■■□□ 2.66
SDF2L1-201ENST00000248958 NRXN2Q9P2S2 1712 aa31.66■■■□□ 2.66
SDF2L1-201ENST00000248958 AFDNP55196 1824 aaKnown RBP31.66■■■□□ 2.66
SDF2L1-201ENST00000248958 EIF2S2P20042 333 aaKnown RBP31.65■■■□□ 2.66
SDF2L1-201ENST00000248958 GPR162Q16538 588 aa31.65■■■□□ 2.66
SDF2L1-201ENST00000248958 WWC1Q8IX03 1113 aa31.65■■■□□ 2.66
SDF2L1-201ENST00000248958 NGEFQ8N5V2 710 aa31.65■■■□□ 2.66
SDF2L1-201ENST00000248958 CCER2I3L3R5 266 aa31.63■■■□□ 2.65
SDF2L1-201ENST00000248958 SERPINB2P05120 415 aa31.63■■■□□ 2.65
SDF2L1-201ENST00000248958 YY1P25490 414 aa31.63■■■□□ 2.65
SDF2L1-201ENST00000248958 TBC1D9BQ66K14 1250 aa31.63■■■□□ 2.65
SDF2L1-201ENST00000248958 CARMIL3Q8ND23 1372 aa31.61■■■□□ 2.65
SDF2L1-201ENST00000248958 IL16Q14005 1332 aa31.61■■■□□ 2.65
SDF2L1-201ENST00000248958 MYL6BP14649 208 aa31.61■■■□□ 2.65
SDF2L1-201ENST00000248958 BICDL1Q6ZP65 573 aa31.61■■■□□ 2.65
SDF2L1-201ENST00000248958 SETDB2Q96T68 719 aa31.61■■■□□ 2.65
SDF2L1-201ENST00000248958 KIAA1551Q9HCM1 1747 aa31.61■■■□□ 2.65
SDF2L1-201ENST00000248958 ERVV-1B6SEH8 477 aa31.6■■■□□ 2.65
SDF2L1-201ENST00000248958 KIF6Q6ZMV9 814 aa31.6■■■□□ 2.65
SDF2L1-201ENST00000248958 KRT24Q2M2I5 525 aa31.59■■■□□ 2.65
SDF2L1-201ENST00000248958 PELP1Q8IZL8 1130 aaKnown RBP31.59■■■□□ 2.65
SDF2L1-201ENST00000248958 PXDNLA1KZ92 1463 aa31.59■■■□□ 2.65
SDF2L1-201ENST00000248958 N4BP2Q86UW6 1770 aaPredicted RBP31.58■■■□□ 2.65
SDF2L1-201ENST00000248958 PDIA6Q15084 440 aa31.58■■■□□ 2.65
SDF2L1-201ENST00000248958 MAP3K15Q6ZN16 1313 aa31.57■■■□□ 2.64
SDF2L1-201ENST00000248958 DUSP27Q5VZP5 1158 aa31.57■■■□□ 2.64
SDF2L1-201ENST00000248958 WDR63Q8IWG1 891 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms