RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 PLEKHF1Q96S99 279 aa28.03■■■□□ 2.08
HCFC1R1-201ENST00000248089 KCNQ3O43525 872 aa28.02■■■□□ 2.08
HCFC1R1-201ENST00000248089 HTATSF1O43719 755 aaKnown RBP28.02■■■□□ 2.08
HCFC1R1-201ENST00000248089 STARD3NLO95772 234 aa28.02■■■□□ 2.08
HCFC1R1-201ENST00000248089 PNNQ9H307 717 aaKnown RBP28.02■■■□□ 2.08
HCFC1R1-201ENST00000248089 CANXP27824 592 aaKnown RBP28.01■■■□□ 2.07
HCFC1R1-201ENST00000248089 N4BP2Q86UW6 1770 aaPredicted RBP28■■■□□ 2.07
HCFC1R1-201ENST00000248089 ZPR1O75312 459 aa27.99■■■□□ 2.07
HCFC1R1-201ENST00000248089 FKBP8Q14318 412 aa27.99■■■□□ 2.07
HCFC1R1-201ENST00000248089 NFE2L2Q16236 605 aa27.99■■■□□ 2.07
HCFC1R1-201ENST00000248089 PARP3Q9Y6F1 533 aa27.99■■■□□ 2.07
HCFC1R1-201ENST00000248089 YBX3P16989 372 aaKnown RBP eCLIP27.98■■■□□ 2.07
HCFC1R1-201ENST00000248089 TEX13AQ9BXU3 409 aaPredicted RBP27.98■■■□□ 2.07
HCFC1R1-201ENST00000248089 KDM3BQ7LBC6 1761 aa27.98■■■□□ 2.07
HCFC1R1-201ENST00000248089 KIAA1551Q9HCM1 1747 aa27.98■■■□□ 2.07
HCFC1R1-201ENST00000248089 USPL1Q5W0Q7 1092 aa27.97■■■□□ 2.07
HCFC1R1-201ENST00000248089 WWC3Q9ULE0 1092 aa27.97■■■□□ 2.07
HCFC1R1-201ENST00000248089 C10orf71Q711Q0 1435 aa27.96■■■□□ 2.07
HCFC1R1-201ENST00000248089 ZNF330Q9Y3S2 320 aaPredicted RBP27.96■■■□□ 2.07
HCFC1R1-201ENST00000248089 SCN7AQ01118 1682 aa27.95■■■□□ 2.07
HCFC1R1-201ENST00000248089 PRKRIP1Q9H875 184 aaPredicted RBP27.95■■■□□ 2.06
HCFC1R1-201ENST00000248089 NARFQ9UHQ1 456 aa27.94■■■□□ 2.06
HCFC1R1-201ENST00000248089 LAMB4A4D0S4 1761 aa27.94■■■□□ 2.06
HCFC1R1-201ENST00000248089 AFDNP55196 1824 aaKnown RBP27.93■■■□□ 2.06
HCFC1R1-201ENST00000248089 WDR43Q15061 677 aaKnown RBP eCLIP27.93■■■□□ 2.06
HCFC1R1-201ENST00000248089 TAF7Q15545 349 aaPredicted RBP27.93■■■□□ 2.06
HCFC1R1-201ENST00000248089 THUMPD2Q9BTF0 503 aaKnown RBP27.93■■■□□ 2.06
HCFC1R1-201ENST00000248089 PXDNLA1KZ92 1463 aa27.93■■■□□ 2.06
HCFC1R1-201ENST00000248089 DDR1Q08345 913 aa27.92■■■□□ 2.06
HCFC1R1-201ENST00000248089 MIS18AQ9NYP9 233 aa27.92■■■□□ 2.06
HCFC1R1-201ENST00000248089 PRAMEF22A3QJZ6 481 aa27.91■■■□□ 2.06
HCFC1R1-201ENST00000248089 A1BGP04217 495 aa27.91■■■□□ 2.06
HCFC1R1-201ENST00000248089 GRIN3BO60391 1043 aa27.9■■■□□ 2.06
HCFC1R1-201ENST00000248089 EIF5P55010 431 aaKnown RBP27.9■■■□□ 2.06
HCFC1R1-201ENST00000248089 CCDC146Q8IYE0 955 aa27.9■■■□□ 2.06
HCFC1R1-201ENST00000248089 A0A087WZG4 1122 aa27.89■■■□□ 2.06
HCFC1R1-201ENST00000248089 SNRPA1P09661 255 aaKnown RBP27.89■■■□□ 2.06
HCFC1R1-201ENST00000248089 BCORQ6W2J9 1755 aa27.88■■■□□ 2.05
HCFC1R1-201ENST00000248089 BRCA1P38398 1863 aaKnown RBP27.88■■■□□ 2.05
HCFC1R1-201ENST00000248089 NPM2Q86SE8 214 aaKnown RBP27.88■■■□□ 2.05
HCFC1R1-201ENST00000248089 USP16Q9Y5T5 823 aa27.88■■■□□ 2.05
HCFC1R1-201ENST00000248089 POLRMTO00411 1230 aaKnown RBP27.87■■■□□ 2.05
HCFC1R1-201ENST00000248089 IL6STP40189 918 aaPredicted RBP27.87■■■□□ 2.05
HCFC1R1-201ENST00000248089 PIP4K2AP48426 406 aaPredicted RBP27.87■■■□□ 2.05
HCFC1R1-201ENST00000248089 RIPK4P57078 832 aa27.87■■■□□ 2.05
HCFC1R1-201ENST00000248089 PNISRQ8TF01 805 aaKnown RBP27.87■■■□□ 2.05
HCFC1R1-201ENST00000248089 BCL2L12Q9HB09 334 aa27.87■■■□□ 2.05
HCFC1R1-201ENST00000248089 TM4SF1P30408 202 aa27.86■■■□□ 2.05
HCFC1R1-201ENST00000248089 NRXN2Q9P2S2 1712 aa27.85■■■□□ 2.05
HCFC1R1-201ENST00000248089 A0A0G2JLW4 131 aa27.85■■■□□ 2.05
HCFC1R1-201ENST00000248089 TGFB2P61812 414 aa27.85■■■□□ 2.05
HCFC1R1-201ENST00000248089 NFIXQ14938 502 aa27.85■■■□□ 2.05
HCFC1R1-201ENST00000248089 TBC1D2BQ9UPU7 963 aa27.85■■■□□ 2.05
HCFC1R1-201ENST00000248089 RRP7AQ9Y3A4 280 aaKnown RBP27.85■■■□□ 2.05
HCFC1R1-201ENST00000248089 TMPOP42166 694 aaKnown RBP27.84■■■□□ 2.05
HCFC1R1-201ENST00000248089 DPEP1P16444 411 aa27.83■■■□□ 2.05
HCFC1R1-201ENST00000248089 BICDL1Q6ZP65 573 aa27.83■■■□□ 2.05
HCFC1R1-201ENST00000248089 ZNF316A6NFI3 1004 aaPredicted RBP27.82■■■□□ 2.04
HCFC1R1-201ENST00000248089 LMOD3Q0VAK6 560 aa27.82■■■□□ 2.04
HCFC1R1-201ENST00000248089 NEUROD2Q15784 382 aa27.82■■■□□ 2.04
HCFC1R1-201ENST00000248089 ADAMTS8Q9UP79 889 aa27.82■■■□□ 2.04
HCFC1R1-201ENST00000248089 RUNDC1Q96C34 613 aa27.81■■■□□ 2.04
HCFC1R1-201ENST00000248089 DZIP3Q86Y13 1208 aaKnown RBP27.79■■■□□ 2.04
HCFC1R1-201ENST00000248089 ZNF784Q8NCA9 323 aaPredicted RBP27.79■■■□□ 2.04
HCFC1R1-201ENST00000248089 TSPYL4Q9UJ04 414 aa27.79■■■□□ 2.04
HCFC1R1-201ENST00000248089 BCS1LQ9Y276 419 aa27.79■■■□□ 2.04
HCFC1R1-201ENST00000248089 SERPINB2P05120 415 aa27.78■■■□□ 2.04
HCFC1R1-201ENST00000248089 EIF4A1P60842 406 aaKnown RBP27.78■■■□□ 2.04
HCFC1R1-201ENST00000248089 TBC1D9BQ66K14 1250 aa27.78■■■□□ 2.04
HCFC1R1-201ENST00000248089 ARFGEF1Q9Y6D6 1849 aa27.78■■■□□ 2.04
HCFC1R1-201ENST00000248089 CAMTA2O94983 1202 aa27.76■■■□□ 2.03
HCFC1R1-201ENST00000248089 DLEC1Q9Y238 1755 aa27.76■■■□□ 2.03
HCFC1R1-201ENST00000248089 NBPF26B4DH59 902 aa27.75■■■□□ 2.03
HCFC1R1-201ENST00000248089 GIGYF1O75420 1035 aaPredicted RBP27.75■■■□□ 2.03
HCFC1R1-201ENST00000248089 CHRNA5P30532 468 aa27.75■■■□□ 2.03
HCFC1R1-201ENST00000248089 NBPF10Q6P3W6 841 aaKnown RBP27.75■■■□□ 2.03
HCFC1R1-201ENST00000248089 NBPF15Q8N660 670 aa27.75■■■□□ 2.03
HCFC1R1-201ENST00000248089 ANKRD31Q8N7Z5 1873 aa27.74■■■□□ 2.03
HCFC1R1-201ENST00000248089 CARMIL3Q8ND23 1372 aa27.74■■■□□ 2.03
HCFC1R1-201ENST00000248089 KCNA3P22001 575 aa27.72■■■□□ 2.03
HCFC1R1-201ENST00000248089 PIM2Q9P1W9 311 aa27.72■■■□□ 2.03
HCFC1R1-201ENST00000248089 NPHP1O15259 732 aa27.7■■■□□ 2.02
HCFC1R1-201ENST00000248089 SETDB2Q96T68 719 aa27.7■■■□□ 2.02
HCFC1R1-201ENST00000248089 TRIM35Q9UPQ4 493 aa27.7■■■□□ 2.02
HCFC1R1-201ENST00000248089 ZNF652Q9Y2D9 606 aa27.7■■■□□ 2.02
HCFC1R1-201ENST00000248089 LAS1LQ9Y4W2 734 aaKnown RBP27.7■■■□□ 2.02
HCFC1R1-201ENST00000248089 DALRD3Q5D0E6 543 aaKnown RBP27.69■■■□□ 2.02
HCFC1R1-201ENST00000248089 NGEFQ8N5V2 710 aa27.69■■■□□ 2.02
HCFC1R1-201ENST00000248089 COL11A2P13942 1736 aaPredicted RBP27.69■■■□□ 2.02
HCFC1R1-201ENST00000248089 NUP98P52948 1817 aa27.67■■■□□ 2.02
HCFC1R1-201ENST00000248089 MYL6BP14649 208 aa27.67■■■□□ 2.02
HCFC1R1-201ENST00000248089 CCDC184Q52MB2 194 aa27.67■■■□□ 2.02
HCFC1R1-201ENST00000248089 CCDC24Q8N4L8 307 aa27.67■■■□□ 2.02
HCFC1R1-201ENST00000248089 BABAM1Q9NWV8 329 aa27.67■■■□□ 2.02
HCFC1R1-201ENST00000248089 PRR5LQ6MZQ0 368 aa27.66■■■□□ 2.02
HCFC1R1-201ENST00000248089 ARHGAP27Q6ZUM4 889 aa27.66■■■□□ 2.02
HCFC1R1-201ENST00000248089 CNBD1Q8NA66 436 aa27.66■■■□□ 2.02
HCFC1R1-201ENST00000248089 ATP10DQ9P241 1426 aa27.66■■■□□ 2.02
HCFC1R1-201ENST00000248089 CACNA1SQ13698 1873 aa27.66■■■□□ 2.02
HCFC1R1-201ENST00000248089 ANP32CO43423 234 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms