RNA–Protein interactions for RNA: ENST00000245934.11

SYMPK-201, Transcript of symplekin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYMPK, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-201ENST00000245934 ZSCAN30Q86W11 494 aa15.36■□□□□ 0.05
SYMPK-201ENST00000245934 LGR6Q9HBX8 967 aa15.36■□□□□ 0.05
SYMPK-201ENST00000245934 CGNQ9P2M7 1197 aaKnown RBP15.36■□□□□ 0.05
SYMPK-201ENST00000245934 MLH3Q9UHC1 1453 aa15.36■□□□□ 0.05
SYMPK-201ENST00000245934 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
SYMPK-201ENST00000245934 ACSBG1Q96GR2 724 aa15.36■□□□□ 0.05
SYMPK-201ENST00000245934 TBC1D32Q96NH3 1257 aa15.36■□□□□ 0.05
SYMPK-201ENST00000245934 LRRC2Q9BYS8 371 aa15.36■□□□□ 0.05
SYMPK-201ENST00000245934 CCDC39Q9UFE4 941 aa15.36■□□□□ 0.05
SYMPK-201ENST00000245934 GLRX3O76003 335 aaKnown RBP15.36■□□□□ 0.05
SYMPK-201ENST00000245934 HAND2P61296 217 aa15.36■□□□□ 0.05
SYMPK-201ENST00000245934 TNPO1Q92973 898 aaKnown RBP15.36■□□□□ 0.05
SYMPK-201ENST00000245934 IQGAP3Q86VI3 1631 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 ATP2B2Q01814 1243 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 SLC4A8Q2Y0W8 1093 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 CCDC34Q96HJ3 373 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 IQSEC3Q9UPP2 1182 aaPredicted RBP15.35■□□□□ 0.05
SYMPK-201ENST00000245934 TRPM2O94759 1503 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 BCORL1Q5H9F3 1711 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 SYCE3A1L190 88 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 NUCB1Q02818 461 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 CAMK4Q16566 473 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 PTPRTO14522 1441 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 DDX46Q7L014 1031 aaKnown RBP15.35■□□□□ 0.05
SYMPK-201ENST00000245934 ZBTB40Q9NUA8 1239 aa15.35■□□□□ 0.05
SYMPK-201ENST00000245934 YTHDC2Q9H6S0 1430 aaKnown RBP15.35■□□□□ 0.05
SYMPK-201ENST00000245934 CLCN1P35523 988 aa15.34■□□□□ 0.05
SYMPK-201ENST00000245934 HMGN5P82970 282 aaKnown RBP15.34■□□□□ 0.05
SYMPK-201ENST00000245934 GOLGA6L1Q8N7Z2 621 aa15.34■□□□□ 0.05
SYMPK-201ENST00000245934 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
SYMPK-201ENST00000245934 TRMT112Q9UI30 125 aaKnown RBP15.34■□□□□ 0.05
SYMPK-201ENST00000245934 RAB11FIP3O75154 756 aa15.34■□□□□ 0.05
SYMPK-201ENST00000245934 BMP2KLQ5H9B9 411 aa15.34■□□□□ 0.05
SYMPK-201ENST00000245934 KLHDC4Q8TBB5 520 aa15.34■□□□□ 0.05
SYMPK-201ENST00000245934 GOLIM4O00461 696 aa15.34■□□□□ 0.05
SYMPK-201ENST00000245934 PANK2Q9BZ23 570 aa15.34■□□□□ 0.05
SYMPK-201ENST00000245934 ME1P48163 572 aa15.33■□□□□ 0.05
SYMPK-201ENST00000245934 CCT2P78371 535 aaKnown RBP15.33■□□□□ 0.05
SYMPK-201ENST00000245934 RHPN1Q8TCX5 695 aa15.33■□□□□ 0.05
SYMPK-201ENST00000245934 TRIM5Q9C035 493 aa15.33■□□□□ 0.05
SYMPK-201ENST00000245934 IFNL2Q8IZJ0 200 aa15.33■□□□□ 0.04
SYMPK-201ENST00000245934 LRP2BPQ9P2M1 347 aa15.33■□□□□ 0.04
SYMPK-201ENST00000245934 NSD2O96028 1365 aa15.33■□□□□ 0.04
SYMPK-201ENST00000245934 UNC13BO14795 1591 aa15.33■□□□□ 0.04
SYMPK-201ENST00000245934 STARD3NLO95772 234 aa15.33■□□□□ 0.04
SYMPK-201ENST00000245934 ANKRD13DQ6ZTN6 518 aa15.33■□□□□ 0.04
SYMPK-201ENST00000245934 SAFBQ15424 915 aaKnown RBP eCLIP15.32■□□□□ 0.04
SYMPK-201ENST00000245934 TEX35Q5T0J7 233 aa15.32■□□□□ 0.04
SYMPK-201ENST00000245934 RAI14Q9P0K7 980 aa15.32■□□□□ 0.04
SYMPK-201ENST00000245934 IFIT1P09914 478 aaKnown RBP15.32■□□□□ 0.04
SYMPK-201ENST00000245934 IL13P35225 146 aa15.32■□□□□ 0.04
SYMPK-201ENST00000245934 MCM2P49736 904 aa15.32■□□□□ 0.04
SYMPK-201ENST00000245934 PDE1AP54750 535 aa15.32■□□□□ 0.04
SYMPK-201ENST00000245934 TTC22Q5TAA0 569 aa15.32■□□□□ 0.04
SYMPK-201ENST00000245934 NECAB1Q8N987 351 aa15.32■□□□□ 0.04
SYMPK-201ENST00000245934 ABCA9Q8IUA7 1624 aa15.32■□□□□ 0.04
SYMPK-201ENST00000245934 NGLY1Q96IV0 654 aa15.32■□□□□ 0.04
SYMPK-201ENST00000245934 ARAP3Q8WWN8 1544 aa15.31■□□□□ 0.04
SYMPK-201ENST00000245934 MAGI2Q86UL8 1455 aa15.31■□□□□ 0.04
SYMPK-201ENST00000245934 STK38Q15208 465 aa15.31■□□□□ 0.04
SYMPK-201ENST00000245934 RRAGDQ9NQL2 400 aaPredicted RBP15.31■□□□□ 0.04
SYMPK-201ENST00000245934 MINDY4BA8MYZ0 360 aa15.31■□□□□ 0.04
SYMPK-201ENST00000245934 HDAC1Q13547 482 aaPredicted RBP15.31■□□□□ 0.04
SYMPK-201ENST00000245934 HECW2Q9P2P5 1572 aa15.31■□□□□ 0.04
SYMPK-201ENST00000245934 AMOTL1Q8IY63 956 aa15.31■□□□□ 0.04
SYMPK-201ENST00000245934 ANKRD44Q8N8A2 993 aa15.31■□□□□ 0.04
SYMPK-201ENST00000245934 IL16Q14005 1332 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 CPA1P15085 419 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 TRERF1Q96PN7 1200 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 PTPRCP08575 1304 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 ERICH4A6NGS2 130 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 HOXC9P31274 260 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 PLCD3Q8N3E9 789 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 TRIM34Q9BYJ4 488 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 RBM27Q9P2N5 1060 aaKnown RBP15.3■□□□□ 0.04
SYMPK-201ENST00000245934 HIP1O00291 1037 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 TDO2P48775 406 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 LMBR1LQ6UX01 489 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 HYPKQ9NX55 129 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
SYMPK-201ENST00000245934 CLTCL1P53675 1640 aa15.3■□□□□ 0.04
SYMPK-201ENST00000245934 HSP90AB3PQ58FF7 597 aa15.29■□□□□ 0.04
SYMPK-201ENST00000245934 LDHAL6AQ6ZMR3 332 aa15.29■□□□□ 0.04
SYMPK-201ENST00000245934 HOMER1Q86YM7 354 aa15.29■□□□□ 0.04
SYMPK-201ENST00000245934 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
SYMPK-201ENST00000245934 WDR33Q9C0J8 1336 aaKnown RBP15.29■□□□□ 0.04
SYMPK-201ENST00000245934 ZBTB7BO15156 539 aaPredicted RBP15.29■□□□□ 0.04
SYMPK-201ENST00000245934 KINO60870 393 aaKnown RBP15.29■□□□□ 0.04
SYMPK-201ENST00000245934 XRCC6P12956 609 aaKnown RBP eCLIP15.29■□□□□ 0.042e-6■□□□□ 8.3
SYMPK-201ENST00000245934 PDCP20941 246 aa15.29■□□□□ 0.04
SYMPK-201ENST00000245934 CADPS2Q86UW7 1296 aa15.29■□□□□ 0.04
SYMPK-201ENST00000245934 CCDC144CPQ8IYA2 1237 aa15.29■□□□□ 0.04
SYMPK-201ENST00000245934 HELBQ8NG08 1087 aaPredicted RBP15.29■□□□□ 0.04
SYMPK-201ENST00000245934 PCMTD1Q96MG8 357 aaPredicted RBP15.29■□□□□ 0.04
SYMPK-201ENST00000245934 NDUFB9Q9Y6M9 179 aa15.29■□□□□ 0.04
SYMPK-201ENST00000245934 EXOC5O00471 708 aa15.29■□□□□ 0.04
SYMPK-201ENST00000245934 BRPF1P55201 1214 aaPredicted RBP15.29■□□□□ 0.04
SYMPK-201ENST00000245934 GPS2Q13227 327 aa15.29■□□□□ 0.04
SYMPK-201ENST00000245934 IFIT5Q13325 482 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms