RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PLEKHG5O94827 1062 aa26.89■■□□□ 1.9
RNF39-201ENST00000244360 ATF3P18847 181 aa26.89■■□□□ 1.9
RNF39-201ENST00000244360 RAB11FIP3O75154 756 aa26.89■■□□□ 1.89
RNF39-201ENST00000244360 COL18A1P39060 1754 aa26.88■■□□□ 1.89
RNF39-201ENST00000244360 PLEKHG2Q9H7P9 1386 aa26.88■■□□□ 1.89
RNF39-201ENST00000244360 RAB3GAP1Q15042 981 aa26.88■■□□□ 1.89
RNF39-201ENST00000244360 PPP1R42Q7Z4L9 355 aa26.88■■□□□ 1.89
RNF39-201ENST00000244360 CRYBG1Q9Y4K1 1723 aa26.87■■□□□ 1.89
RNF39-201ENST00000244360 NBPF7P0C2Y1 421 aaPredicted RBP26.86■■□□□ 1.89
RNF39-201ENST00000244360 ZC3H6P61129 1189 aaKnown RBP26.86■■□□□ 1.89
RNF39-201ENST00000244360 XRCC6P12956 609 aaKnown RBP eCLIP26.85■■□□□ 1.89
RNF39-201ENST00000244360 TSHZ3Q63HK5 1081 aa26.85■■□□□ 1.89
RNF39-201ENST00000244360 ANXA1P04083 346 aa26.85■■□□□ 1.89
RNF39-201ENST00000244360 MRE11P49959 708 aa26.85■■□□□ 1.89
RNF39-201ENST00000244360 TNPO1Q92973 898 aaKnown RBP26.85■■□□□ 1.89
RNF39-201ENST00000244360 HSP90AA1P07900 732 aaKnown RBP26.84■■□□□ 1.89
RNF39-201ENST00000244360 SKOR2Q2VWA4 1001 aaPredicted RBP26.84■■□□□ 1.89
RNF39-201ENST00000244360 ALDH1L1O75891 902 aa26.83■■□□□ 1.89
RNF39-201ENST00000244360 ESYT1Q9BSJ8 1104 aa26.83■■□□□ 1.89
RNF39-201ENST00000244360 SCN11AQ9UI33 1791 aa26.83■■□□□ 1.89
RNF39-201ENST00000244360 TNS3Q68CZ2 1445 aa26.83■■□□□ 1.88
RNF39-201ENST00000244360 MTX1Q13505 466 aa26.82■■□□□ 1.88
RNF39-201ENST00000244360 ANO8Q9HCE9 1232 aaPredicted RBP26.82■■□□□ 1.88
RNF39-201ENST00000244360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.82■■□□□ 1.88
RNF39-201ENST00000244360 KDM6AO15550 1401 aaPredicted RBP26.82■■□□□ 1.88
RNF39-201ENST00000244360 PROSER3Q2NL68 480 aa26.82■■□□□ 1.88
RNF39-201ENST00000244360 KSR2Q6VAB6 950 aa26.82■■□□□ 1.88
RNF39-201ENST00000244360 RAPGEF4Q8WZA2 1011 aa26.82■■□□□ 1.88
RNF39-201ENST00000244360 GZF1Q9H116 711 aaPredicted RBP26.82■■□□□ 1.88
RNF39-201ENST00000244360 NPHP3Q7Z494 1330 aa26.82■■□□□ 1.88
RNF39-201ENST00000244360 SRGAP3O43295 1099 aa26.81■■□□□ 1.88
RNF39-201ENST00000244360 SURF6O75683 361 aaKnown RBP26.81■■□□□ 1.88
RNF39-201ENST00000244360 HYPKQ9NX55 129 aa26.81■■□□□ 1.88
RNF39-201ENST00000244360 CHMLP26374 656 aa26.8■■□□□ 1.88
RNF39-201ENST00000244360 CADPS2Q86UW7 1296 aa26.8■■□□□ 1.88
RNF39-201ENST00000244360 RHPN1Q8TCX5 695 aa26.8■■□□□ 1.88
RNF39-201ENST00000244360 MEGF6O75095 1541 aa26.8■■□□□ 1.88
RNF39-201ENST00000244360 KIF1BPQ96EK5 621 aa26.8■■□□□ 1.88
RNF39-201ENST00000244360 MAP3K2Q9Y2U5 619 aa26.8■■□□□ 1.88
RNF39-201ENST00000244360 DDX17Q92841 729 aaKnown RBP26.79■■□□□ 1.88
RNF39-201ENST00000244360 IL1RAPL2Q9NP60 686 aa26.79■■□□□ 1.88
RNF39-201ENST00000244360 NLRP2Q9NX02 1062 aa26.79■■□□□ 1.88
RNF39-201ENST00000244360 PRAMEF22A3QJZ6 481 aa26.78■■□□□ 1.88
RNF39-201ENST00000244360 HSP90AB4PQ58FF6 505 aa26.78■■□□□ 1.88
RNF39-201ENST00000244360 TATP17735 454 aaPredicted RBP26.78■■□□□ 1.88
RNF39-201ENST00000244360 SLC52A2Q9HAB3 445 aa26.78■■□□□ 1.88
RNF39-201ENST00000244360 DDX21Q9NR30 783 aaKnown RBP eCLIP26.78■■□□□ 1.88
RNF39-201ENST00000244360 MRC1P22897 1456 aa26.78■■□□□ 1.88
RNF39-201ENST00000244360 ST18O60284 1047 aa26.77■■□□□ 1.88
RNF39-201ENST00000244360 PHKG2P15735 406 aa26.77■■□□□ 1.88
RNF39-201ENST00000244360 SPG7Q9UQ90 795 aa26.77■■□□□ 1.88
RNF39-201ENST00000244360 CLEC17AQ6ZS10 378 aa26.76■■□□□ 1.87
RNF39-201ENST00000244360 IL17RAQ96F46 866 aa26.76■■□□□ 1.87
RNF39-201ENST00000244360 FOXD4L1Q9NU39 408 aa26.76■■□□□ 1.87
RNF39-201ENST00000244360 PDIA6Q15084 440 aa26.75■■□□□ 1.87
RNF39-201ENST00000244360 ZNF790Q6PG37 636 aa26.75■■□□□ 1.87
RNF39-201ENST00000244360 PI4K2BQ8TCG2 481 aa26.75■■□□□ 1.87
RNF39-201ENST00000244360 CPDO75976 1380 aa26.75■■□□□ 1.87
RNF39-201ENST00000244360 TRIM6-TRIM34B2RNG4 842 aa26.75■■□□□ 1.87
RNF39-201ENST00000244360 UNC5CLQ8IV45 518 aa26.75■■□□□ 1.87
RNF39-201ENST00000244360 HDAC5Q9UQL6 1122 aa26.75■■□□□ 1.87
RNF39-201ENST00000244360 USP42Q9H9J4 1324 aaKnown RBP26.75■■□□□ 1.87
RNF39-201ENST00000244360 C5P01031 1676 aa26.75■■□□□ 1.87
RNF39-201ENST00000244360 PKD1L3Q7Z443 1732 aa26.75■■□□□ 1.87
RNF39-201ENST00000244360 EPB41L2O43491 1005 aaKnown RBP26.74■■□□□ 1.87
RNF39-201ENST00000244360 NUTM1Q86Y26 1132 aa26.74■■□□□ 1.87
RNF39-201ENST00000244360 RILPL2Q969X0 211 aa26.74■■□□□ 1.87
RNF39-201ENST00000244360 UTYO14607 1347 aa26.74■■□□□ 1.87
RNF39-201ENST00000244360 SPATA31A3Q5VYP0 1347 aa26.74■■□□□ 1.87
RNF39-201ENST00000244360 LINS1Q8NG48 757 aa26.74■■□□□ 1.87
RNF39-201ENST00000244360 GRPEL1Q9HAV7 217 aa26.74■■□□□ 1.87
RNF39-201ENST00000244360 GOLGA6L22H0YM25 854 aa26.73■■□□□ 1.87
RNF39-201ENST00000244360 DDX58O95786 925 aaKnown RBP26.72■■□□□ 1.87
RNF39-201ENST00000244360 ANAPC15P60006 121 aa26.72■■□□□ 1.87
RNF39-201ENST00000244360 IFNL2Q8IZJ0 200 aa26.72■■□□□ 1.87
RNF39-201ENST00000244360 C9orf78Q9NZ63 289 aaPredicted RBP26.71■■□□□ 1.87
RNF39-201ENST00000244360 CABLES1Q8TDN4 633 aa26.7■■□□□ 1.87
RNF39-201ENST00000244360 MCCP23508 829 aa26.7■■□□□ 1.86
RNF39-201ENST00000244360 SSFA2P28290 1259 aa26.69■■□□□ 1.86
RNF39-201ENST00000244360 CWF19L2Q2TBE0 894 aaKnown RBP26.69■■□□□ 1.86
RNF39-201ENST00000244360 ARXQ96QS3 562 aa26.69■■□□□ 1.86
RNF39-201ENST00000244360 CWC22Q9HCG8 908 aaKnown RBP26.69■■□□□ 1.86
RNF39-201ENST00000244360 SLC39A6Q13433 755 aa26.69■■□□□ 1.86
RNF39-201ENST00000244360 RRAGDQ9NQL2 400 aaPredicted RBP26.69■■□□□ 1.86
RNF39-201ENST00000244360 TTC41PQ6P2S7 1318 aa26.68■■□□□ 1.86
RNF39-201ENST00000244360 XIRP1Q702N8 1843 aaKnown RBP26.68■■□□□ 1.86
RNF39-201ENST00000244360 GRM8O00222 908 aa26.68■■□□□ 1.86
RNF39-201ENST00000244360 CYP2E1P05181 493 aaPredicted RBP26.68■■□□□ 1.86
RNF39-201ENST00000244360 CSB-PGBD3P0DP91 1061 aa26.68■■□□□ 1.86
RNF39-201ENST00000244360 DCAF5Q96JK2 942 aa26.68■■□□□ 1.86
RNF39-201ENST00000244360 PANK2Q9BZ23 570 aa26.68■■□□□ 1.86
RNF39-201ENST00000244360 NFATC2IPQ8NCF5 419 aa26.67■■□□□ 1.86
RNF39-201ENST00000244360 ANO2Q9NQ90 1003 aa26.67■■□□□ 1.86
RNF39-201ENST00000244360 NUCB2P80303 420 aa26.67■■□□□ 1.86
RNF39-201ENST00000244360 AK9Q5TCS8 1911 aa26.67■■□□□ 1.86
RNF39-201ENST00000244360 PARP4Q9UKK3 1724 aaKnown RBP26.67■■□□□ 1.86
RNF39-201ENST00000244360 CYP27B1O15528 508 aa26.66■■□□□ 1.86
RNF39-201ENST00000244360 CHRNA2Q15822 529 aa26.66■■□□□ 1.86
RNF39-201ENST00000244360 MCM2P49736 904 aa26.66■■□□□ 1.86
RNF39-201ENST00000244360 ERC1Q8IUD2 1116 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms