RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 FKBP8Q14318 412 aa11.64□□□□□ -0.55
IFT43-201ENST00000238628 EAPPQ56P03 285 aaPredicted RBP11.64□□□□□ -0.55
IFT43-201ENST00000238628 HSP90AB2PQ58FF8 381 aa11.64□□□□□ -0.55
IFT43-201ENST00000238628 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
IFT43-201ENST00000238628 SOX10P56693 466 aa11.63□□□□□ -0.55
IFT43-201ENST00000238628 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
IFT43-201ENST00000238628 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
IFT43-201ENST00000238628 RNF39Q9H2S5 420 aa11.63□□□□□ -0.55
IFT43-201ENST00000238628 SRP68Q9UHB9 627 aaKnown RBP11.63□□□□□ -0.55
IFT43-201ENST00000238628 ECE1P42892 770 aa11.62□□□□□ -0.55
IFT43-201ENST00000238628 CAPNS2Q96L46 248 aa11.62□□□□□ -0.55
IFT43-201ENST00000238628 GPR101Q96P66 508 aaPredicted RBP11.62□□□□□ -0.55
IFT43-201ENST00000238628 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
IFT43-201ENST00000238628 ATG3Q9NT62 314 aa11.62□□□□□ -0.55
IFT43-201ENST00000238628 TNRC18O15417 2968 aaPredicted RBP11.62□□□□□ -0.55
IFT43-201ENST00000238628 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
IFT43-201ENST00000238628 NKX1-1Q15270 411 aaPredicted RBP11.61□□□□□ -0.55
IFT43-201ENST00000238628 INSRP06213 1382 aa11.61□□□□□ -0.55
IFT43-201ENST00000238628 CNTNAP4Q9C0A0 1308 aa11.6□□□□□ -0.55
IFT43-201ENST00000238628 CASP8AP2Q9UKL3 1982 aa11.6□□□□□ -0.55
IFT43-201ENST00000238628 CNTROBQ8N137 903 aa11.6□□□□□ -0.55
IFT43-201ENST00000238628 GCC1Q96CN9 775 aa11.6□□□□□ -0.55
IFT43-201ENST00000238628 FLT4P35916 1363 aa11.59□□□□□ -0.55
IFT43-201ENST00000238628 MAP1SQ66K74 1059 aaPredicted RBP11.59□□□□□ -0.55
IFT43-201ENST00000238628 CYP4F22Q6NT55 531 aa11.59□□□□□ -0.55
IFT43-201ENST00000238628 C2CD5Q86YS7 1000 aa11.59□□□□□ -0.55
IFT43-201ENST00000238628 SPG7Q9UQ90 795 aa11.59□□□□□ -0.55
IFT43-201ENST00000238628 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
IFT43-201ENST00000238628 KIF24Q5T7B8 1368 aa11.58□□□□□ -0.56
IFT43-201ENST00000238628 CA12O43570 354 aa11.58□□□□□ -0.56
IFT43-201ENST00000238628 TM4SF1P30408 202 aa11.58□□□□□ -0.56
IFT43-201ENST00000238628 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
IFT43-201ENST00000238628 KIF20BQ96Q89 1820 aa11.58□□□□□ -0.56
IFT43-201ENST00000238628 H0YIN7 160 aa11.57□□□□□ -0.56
IFT43-201ENST00000238628 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
IFT43-201ENST00000238628 C21orf2O43822 256 aa11.57□□□□□ -0.56
IFT43-201ENST00000238628 L3MBTL3Q96JM7 780 aaPredicted RBP11.57□□□□□ -0.56
IFT43-201ENST00000238628 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
IFT43-201ENST00000238628 KDRP35968 1356 aa11.56□□□□□ -0.56
IFT43-201ENST00000238628 MAP2K2P36507 400 aa11.56□□□□□ -0.56
IFT43-201ENST00000238628 CDCA8Q53HL2 280 aa11.56□□□□□ -0.56
IFT43-201ENST00000238628 TAOK3Q9H2K8 898 aa11.56□□□□□ -0.56
IFT43-201ENST00000238628 HACL1Q9UJ83 578 aa11.56□□□□□ -0.56
IFT43-201ENST00000238628 DICER1Q9UPY3 1922 aaKnown RBP11.56□□□□□ -0.56
IFT43-201ENST00000238628 AOC2O75106 756 aa11.55□□□□□ -0.56
IFT43-201ENST00000238628 ZPR1O75312 459 aa11.55□□□□□ -0.56
IFT43-201ENST00000238628 EPHX2P34913 555 aa11.55□□□□□ -0.56
IFT43-201ENST00000238628 PNMA8AQ86V59 439 aaPredicted RBP11.55□□□□□ -0.56
IFT43-201ENST00000238628 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.56
IFT43-201ENST00000238628 DDX21Q9NR30 783 aaKnown RBP eCLIP11.55□□□□□ -0.56
IFT43-201ENST00000238628 SCN4AP35499 1836 aa11.54□□□□□ -0.56
IFT43-201ENST00000238628 CRKLP46109 303 aaKnown RBP11.54□□□□□ -0.56
IFT43-201ENST00000238628 HABP4Q5JVS0 413 aaKnown RBP11.54□□□□□ -0.56
IFT43-201ENST00000238628 USPL1Q5W0Q7 1092 aa11.54□□□□□ -0.56
IFT43-201ENST00000238628 IFNL2Q8IZJ0 200 aa11.54□□□□□ -0.56
IFT43-201ENST00000238628 NBPF15Q8N660 670 aa11.54□□□□□ -0.56
IFT43-201ENST00000238628 CARD14Q9BXL6 1004 aa11.54□□□□□ -0.56
IFT43-201ENST00000238628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.56
IFT43-201ENST00000238628 SERPINB2P05120 415 aa11.53□□□□□ -0.56
IFT43-201ENST00000238628 EYA1Q99502 592 aa11.53□□□□□ -0.56
IFT43-201ENST00000238628 MYH14Q7Z406 1995 aaKnown RBP11.53□□□□□ -0.56
IFT43-201ENST00000238628 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
IFT43-201ENST00000238628 LTBP3Q9NS15 1303 aa11.53□□□□□ -0.56
IFT43-201ENST00000238628 PHKG2P15735 406 aa11.52□□□□□ -0.57
IFT43-201ENST00000238628 NFIXQ14938 502 aa11.52□□□□□ -0.57
IFT43-201ENST00000238628 THSD7BQ9C0I4 1608 aa11.52□□□□□ -0.57
IFT43-201ENST00000238628 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
IFT43-201ENST00000238628 DLEC1Q9Y238 1755 aa11.51□□□□□ -0.57
IFT43-201ENST00000238628 COL5A3P25940 1745 aaPredicted RBP11.5□□□□□ -0.57
IFT43-201ENST00000238628 DLL1O00548 723 aa11.5□□□□□ -0.57
IFT43-201ENST00000238628 PTCD1O75127 700 aaKnown RBP11.5□□□□□ -0.57
IFT43-201ENST00000238628 BRPF1P55201 1214 aaPredicted RBP11.5□□□□□ -0.57
IFT43-201ENST00000238628 FMR1Q06787 632 aaKnown RBP eCLIP11.5□□□□□ -0.57
IFT43-201ENST00000238628 TLL2Q9Y6L7 1015 aa11.5□□□□□ -0.57
IFT43-201ENST00000238628 RNF123Q5XPI4 1314 aa11.5□□□□□ -0.57
IFT43-201ENST00000238628 NCAPD2Q15021 1401 aa11.5□□□□□ -0.57
IFT43-201ENST00000238628 FER1L6Q2WGJ9 1857 aa11.49□□□□□ -0.57
IFT43-201ENST00000238628 POLKQ9UBT6 870 aa11.49□□□□□ -0.57
IFT43-201ENST00000238628 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
IFT43-201ENST00000238628 AFDNP55196 1824 aaKnown RBP11.49□□□□□ -0.57
IFT43-201ENST00000238628 ERVV-2B6SEH9 535 aa11.48□□□□□ -0.57
IFT43-201ENST00000238628 CST9Q5W186 159 aa11.48□□□□□ -0.57
IFT43-201ENST00000238628 CIAPIN1Q6FI81 312 aa11.48□□□□□ -0.57
IFT43-201ENST00000238628 PDZRN3Q9UPQ7 1066 aa11.48□□□□□ -0.57
IFT43-201ENST00000238628 ZNF541Q9H0D2 1346 aa11.48□□□□□ -0.57
IFT43-201ENST00000238628 ADAMTSL1Q8N6G6 1762 aa11.47□□□□□ -0.57
IFT43-201ENST00000238628 ANKRD26Q9UPS8 1709 aa11.47□□□□□ -0.57
IFT43-201ENST00000238628 CARMIL3Q8ND23 1372 aa11.47□□□□□ -0.57
IFT43-201ENST00000238628 HSP90AB1P08238 724 aaKnown RBP11.47□□□□□ -0.57
IFT43-201ENST00000238628 PDE6BP35913 854 aa11.47□□□□□ -0.57
IFT43-201ENST00000238628 EIF4A2Q14240 407 aaKnown RBP11.47□□□□□ -0.57
IFT43-201ENST00000238628 SOGA3Q5TF21 947 aa11.47□□□□□ -0.57
IFT43-201ENST00000238628 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
IFT43-201ENST00000238628 TRAF5O00463 557 aa11.46□□□□□ -0.57
IFT43-201ENST00000238628 TNNT2P45379 298 aaPredicted RBP11.46□□□□□ -0.57
IFT43-201ENST00000238628 CABP4P57796 275 aa11.46□□□□□ -0.57
IFT43-201ENST00000238628 PLEKHO1Q53GL0 409 aaPredicted RBP11.46□□□□□ -0.57
IFT43-201ENST00000238628 INTS5Q6P9B9 1019 aaKnown RBP11.46□□□□□ -0.57
IFT43-201ENST00000238628 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
IFT43-201ENST00000238628 NARFQ9UHQ1 456 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms