RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ZNF335Q9H4Z2 1342 aaPredicted RBP19.84■□□□□ 0.77
UBE3D-201ENST00000237186 EPB41L2O43491 1005 aaKnown RBP19.84■□□□□ 0.77
UBE3D-201ENST00000237186 KSR2Q6VAB6 950 aa19.84■□□□□ 0.77
UBE3D-201ENST00000237186 TNPO1Q92973 898 aaKnown RBP19.84■□□□□ 0.77
UBE3D-201ENST00000237186 PLEKHG5O94827 1062 aa19.83■□□□□ 0.76
UBE3D-201ENST00000237186 HSP90AA1P07900 732 aaKnown RBP19.83■□□□□ 0.76
UBE3D-201ENST00000237186 CLEC17AQ6ZS10 378 aa19.83■□□□□ 0.76
UBE3D-201ENST00000237186 HYPKQ9NX55 129 aa19.83■□□□□ 0.76
UBE3D-201ENST00000237186 XIRP1Q702N8 1843 aaKnown RBP19.82■□□□□ 0.76
UBE3D-201ENST00000237186 ABCC6O95255 1503 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 ZC3H6P61129 1189 aaKnown RBP19.82■□□□□ 0.76
UBE3D-201ENST00000237186 HSP90AB4PQ58FF6 505 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 DDX17Q92841 729 aaKnown RBP19.82■□□□□ 0.76
UBE3D-201ENST00000237186 ESYT1Q9BSJ8 1104 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 HDAC5Q9UQL6 1122 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 SRGAP3O43295 1099 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 TRAK2O60296 914 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 SURF6O75683 361 aaKnown RBP19.82■□□□□ 0.76
UBE3D-201ENST00000237186 CHMLP26374 656 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 RHPN1Q8TCX5 695 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 RAPGEF4Q8WZA2 1011 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 KIF1BPQ96EK5 621 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 IL17RAQ96F46 866 aa19.82■□□□□ 0.76
UBE3D-201ENST00000237186 GBP4Q96PP9 640 aa19.81■□□□□ 0.76
UBE3D-201ENST00000237186 NPHP3Q7Z494 1330 aa19.81■□□□□ 0.76
UBE3D-201ENST00000237186 ST18O60284 1047 aa19.8■□□□□ 0.76
UBE3D-201ENST00000237186 ANXA1P04083 346 aa19.8■□□□□ 0.76
UBE3D-201ENST00000237186 TSHZ3Q63HK5 1081 aa19.8■□□□□ 0.76
UBE3D-201ENST00000237186 PTMSP20962 102 aa19.79■□□□□ 0.76
UBE3D-201ENST00000237186 DDX21Q9NR30 783 aaKnown RBP eCLIP19.79■□□□□ 0.76
UBE3D-201ENST00000237186 MAP3K2Q9Y2U5 619 aa19.79■□□□□ 0.76
UBE3D-201ENST00000237186 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
UBE3D-201ENST00000237186 ANAPC15P60006 121 aa19.79■□□□□ 0.76
UBE3D-201ENST00000237186 SLC52A2Q9HAB3 445 aa19.79■□□□□ 0.76
UBE3D-201ENST00000237186 SPG7Q9UQ90 795 aa19.79■□□□□ 0.76
UBE3D-201ENST00000237186 PHKG2P15735 406 aa19.78■□□□□ 0.76
UBE3D-201ENST00000237186 PROSER3Q2NL68 480 aa19.78■□□□□ 0.76
UBE3D-201ENST00000237186 ZNF790Q6PG37 636 aa19.78■□□□□ 0.76
UBE3D-201ENST00000237186 IL27Q8NEV9 243 aa19.78■□□□□ 0.76
UBE3D-201ENST00000237186 UTYO14607 1347 aa19.78■□□□□ 0.76
UBE3D-201ENST00000237186 USP42Q9H9J4 1324 aaKnown RBP19.78■□□□□ 0.76
UBE3D-201ENST00000237186 PDIA6Q15084 440 aa19.77■□□□□ 0.76
UBE3D-201ENST00000237186 CWC22Q9HCG8 908 aaKnown RBP19.77■□□□□ 0.76
UBE3D-201ENST00000237186 IL1RAPL2Q9NP60 686 aa19.77■□□□□ 0.76
UBE3D-201ENST00000237186 SIPA1L3O60292 1781 aaPredicted RBP19.77■□□□□ 0.76
UBE3D-201ENST00000237186 TRIM6-TRIM34B2RNG4 842 aa19.77■□□□□ 0.76
UBE3D-201ENST00000237186 DDX58O95786 925 aaKnown RBP19.77■□□□□ 0.76
UBE3D-201ENST00000237186 LINS1Q8NG48 757 aa19.77■□□□□ 0.76
UBE3D-201ENST00000237186 PI4K2BQ8TCG2 481 aa19.77■□□□□ 0.76
UBE3D-201ENST00000237186 NLRP2Q9NX02 1062 aa19.77■□□□□ 0.76
UBE3D-201ENST00000237186 TUBGCP6Q96RT7 1819 aa19.76■□□□□ 0.75
UBE3D-201ENST00000237186 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
UBE3D-201ENST00000237186 L1TD1Q5T7N2 865 aaKnown RBP19.76■□□□□ 0.75
UBE3D-201ENST00000237186 IFNL2Q8IZJ0 200 aa19.76■□□□□ 0.75
UBE3D-201ENST00000237186 KDM6AO15550 1401 aaPredicted RBP19.76■□□□□ 0.75
UBE3D-201ENST00000237186 CPDO75976 1380 aa19.76■□□□□ 0.75
UBE3D-201ENST00000237186 FSD2A1L4K1 749 aa19.75■□□□□ 0.75
UBE3D-201ENST00000237186 PRAMEF22A3QJZ6 481 aa19.75■□□□□ 0.75
UBE3D-201ENST00000237186 UNC5CLQ8IV45 518 aa19.75■□□□□ 0.75
UBE3D-201ENST00000237186 RILPL2Q969X0 211 aa19.75■□□□□ 0.75
UBE3D-201ENST00000237186 C9orf78Q9NZ63 289 aaPredicted RBP19.75■□□□□ 0.75
UBE3D-201ENST00000237186 SPATA31A3Q5VYP0 1347 aa19.75■□□□□ 0.75
UBE3D-201ENST00000237186 MCCP23508 829 aa19.75■□□□□ 0.75
UBE3D-201ENST00000237186 NUCB2P80303 420 aa19.75■□□□□ 0.75
UBE3D-201ENST00000237186 SKOR2Q2VWA4 1001 aaPredicted RBP19.75■□□□□ 0.75
UBE3D-201ENST00000237186 BRINP3Q76B58 766 aa19.75■□□□□ 0.75
UBE3D-201ENST00000237186 COL18A1P39060 1754 aa19.74■□□□□ 0.75
UBE3D-201ENST00000237186 MCM2P49736 904 aa19.74■□□□□ 0.75
UBE3D-201ENST00000237186 NUTM1Q86Y26 1132 aa19.74■□□□□ 0.75
UBE3D-201ENST00000237186 FOXD4L1Q9NU39 408 aa19.74■□□□□ 0.75
UBE3D-201ENST00000237186 TTC41PQ6P2S7 1318 aa19.73■□□□□ 0.75
UBE3D-201ENST00000237186 CYP2E1P05181 493 aaPredicted RBP19.73■□□□□ 0.75
UBE3D-201ENST00000237186 MEGF6O75095 1541 aa19.73■□□□□ 0.75
UBE3D-201ENST00000237186 DCAF5Q96JK2 942 aa19.73■□□□□ 0.75
UBE3D-201ENST00000237186 SLAIN2Q9P270 581 aa19.73■□□□□ 0.75
UBE3D-201ENST00000237186 GRM8O00222 908 aa19.72■□□□□ 0.75
UBE3D-201ENST00000237186 ERC1Q8IUD2 1116 aa19.72■□□□□ 0.75
UBE3D-201ENST00000237186 NFATC2IPQ8NCF5 419 aa19.72■□□□□ 0.75
UBE3D-201ENST00000237186 SSFA2P28290 1259 aa19.71■□□□□ 0.75
UBE3D-201ENST00000237186 BRPF3Q9ULD4 1205 aa19.71■□□□□ 0.75
UBE3D-201ENST00000237186 MRC1P22897 1456 aa19.71■□□□□ 0.75
UBE3D-201ENST00000237186 CWF19L2Q2TBE0 894 aaKnown RBP19.71■□□□□ 0.75
UBE3D-201ENST00000237186 LARP1Q6PKG0 1096 aaKnown RBP19.71■□□□□ 0.75
UBE3D-201ENST00000237186 ISY1Q9ULR0 285 aaKnown RBP19.71■□□□□ 0.75
UBE3D-201ENST00000237186 RGPD5Q99666 1765 aa19.7■□□□□ 0.74
UBE3D-201ENST00000237186 GLRX3O76003 335 aaKnown RBP19.7■□□□□ 0.74
UBE3D-201ENST00000237186 SLC39A6Q13433 755 aa19.7■□□□□ 0.74
UBE3D-201ENST00000237186 ANO2Q9NQ90 1003 aa19.7■□□□□ 0.74
UBE3D-201ENST00000237186 GOLGA6L3A6NEY3 463 aa19.69■□□□□ 0.74
UBE3D-201ENST00000237186 CYP27B1O15528 508 aa19.69■□□□□ 0.74
UBE3D-201ENST00000237186 CSB-PGBD3P0DP91 1061 aa19.69■□□□□ 0.74
UBE3D-201ENST00000237186 CNTROBQ8N137 903 aa19.69■□□□□ 0.74
UBE3D-201ENST00000237186 CLASRPQ8N2M8 674 aaKnown RBP19.69■□□□□ 0.74
UBE3D-201ENST00000237186 CABLES1Q8TDN4 633 aa19.69■□□□□ 0.74
UBE3D-201ENST00000237186 KAZALD1Q96I82 304 aa19.69■□□□□ 0.74
UBE3D-201ENST00000237186 SGSM2O43147 1006 aa19.69■□□□□ 0.74
UBE3D-201ENST00000237186 NEK4P51957 841 aa19.69■□□□□ 0.74
UBE3D-201ENST00000237186 LRP10Q7Z4F1 713 aa19.69■□□□□ 0.74
UBE3D-201ENST00000237186 ZNF496Q96IT1 587 aaPredicted RBP19.69■□□□□ 0.74
UBE3D-201ENST00000237186 BAG4O95429 457 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms