RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 HSP90AB1P08238 724 aaKnown RBP19.89■□□□□ 0.77
ITGA4-201ENST00000233573 DBF4Q9UBU7 674 aaPredicted RBP19.89■□□□□ 0.77
ITGA4-201ENST00000233573 C5P01031 1676 aa19.89■□□□□ 0.77
ITGA4-201ENST00000233573 ADCY9O60503 1353 aa19.89■□□□□ 0.77
ITGA4-201ENST00000233573 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
ITGA4-201ENST00000233573 SLC4A3P48751 1232 aa19.88■□□□□ 0.77
ITGA4-201ENST00000233573 ANXA1P04083 346 aa19.87■□□□□ 0.77
ITGA4-201ENST00000233573 CABP4P57796 275 aa19.87■□□□□ 0.77
ITGA4-201ENST00000233573 DISP2A7MBM2 1401 aa19.87■□□□□ 0.77
ITGA4-201ENST00000233573 ATP8B2P98198 1209 aa19.87■□□□□ 0.77
ITGA4-201ENST00000233573 BEND3Q5T5X7 828 aa19.87■□□□□ 0.77
ITGA4-201ENST00000233573 C16orf71Q8IYS4 520 aaPredicted RBP19.87■□□□□ 0.77
ITGA4-201ENST00000233573 PI4KAP2A4QPH2 592 aa19.86■□□□□ 0.77
ITGA4-201ENST00000233573 PROSER3Q2NL68 480 aa19.86■□□□□ 0.77
ITGA4-201ENST00000233573 PI4KAP1Q8N8J0 262 aa19.86■□□□□ 0.77
ITGA4-201ENST00000233573 DNAAF4Q8WXU2 420 aa19.86■□□□□ 0.77
ITGA4-201ENST00000233573 SRCIN1Q9C0H9 1055 aa19.86■□□□□ 0.77
ITGA4-201ENST00000233573 TOGARAM1Q9Y4F4 1720 aa19.86■□□□□ 0.77
ITGA4-201ENST00000233573 WNK3Q9BYP7 1800 aa19.85■□□□□ 0.77
ITGA4-201ENST00000233573 GSPT1P15170 499 aaKnown RBP19.85■□□□□ 0.77
ITGA4-201ENST00000233573 LRRFIP2Q9Y608 721 aaKnown RBP19.85■□□□□ 0.77
ITGA4-201ENST00000233573 PNMA6EA0A0J9YXQ4 647 aa19.85■□□□□ 0.77
ITGA4-201ENST00000233573 MFAP1P55081 439 aaKnown RBP19.85■□□□□ 0.77
ITGA4-201ENST00000233573 OTUD7AQ8TE49 926 aaPredicted RBP19.84■□□□□ 0.77
ITGA4-201ENST00000233573 ZNF496Q96IT1 587 aaPredicted RBP19.84■□□□□ 0.77
ITGA4-201ENST00000233573 SMARCA5O60264 1052 aaPredicted RBP19.83■□□□□ 0.77
ITGA4-201ENST00000233573 PDIA6Q15084 440 aa19.83■□□□□ 0.77
ITGA4-201ENST00000233573 NKX1-1Q15270 411 aaPredicted RBP19.83■□□□□ 0.77
ITGA4-201ENST00000233573 TTC22Q5TAA0 569 aa19.83■□□□□ 0.77
ITGA4-201ENST00000233573 C22orf23Q9BZE7 217 aa19.83■□□□□ 0.77
ITGA4-201ENST00000233573 GLI3P10071 1580 aa19.83■□□□□ 0.77
ITGA4-201ENST00000233573 UBTFL1P0CB47 393 aaPredicted RBP19.83■□□□□ 0.76
ITGA4-201ENST00000233573 JCADQ9P266 1359 aa19.83■□□□□ 0.76
ITGA4-201ENST00000233573 SLIT2O94813 1529 aa19.82■□□□□ 0.76
ITGA4-201ENST00000233573 TTC5Q8N0Z6 440 aa19.82■□□□□ 0.76
ITGA4-201ENST00000233573 DDX21Q9NR30 783 aaKnown RBP eCLIP19.82■□□□□ 0.76
ITGA4-201ENST00000233573 HYPKQ9NX55 129 aa19.82■□□□□ 0.76
ITGA4-201ENST00000233573 NWD2Q9ULI1 1742 aa19.81■□□□□ 0.76
ITGA4-201ENST00000233573 TBC1D9Q6ZT07 1266 aa19.81■□□□□ 0.76
ITGA4-201ENST00000233573 SPATA31A1Q5TZJ5 1347 aa19.81■□□□□ 0.76
ITGA4-201ENST00000233573 IBTKQ9P2D0 1353 aaPredicted RBP19.81■□□□□ 0.76
ITGA4-201ENST00000233573 KSR2Q6VAB6 950 aa19.8■□□□□ 0.76
ITGA4-201ENST00000233573 SSH3Q8TE77 659 aa19.8■□□□□ 0.76
ITGA4-201ENST00000233573 DAXXQ9UER7 740 aaPredicted RBP19.8■□□□□ 0.76
ITGA4-201ENST00000233573 ERVV-2B6SEH9 535 aa19.8■□□□□ 0.76
ITGA4-201ENST00000233573 NBPF7P0C2Y1 421 aaPredicted RBP19.8■□□□□ 0.76
ITGA4-201ENST00000233573 C8orf37Q96NL8 207 aa19.8■□□□□ 0.76
ITGA4-201ENST00000233573 EXOC6BQ9Y2D4 811 aa19.8■□□□□ 0.76
ITGA4-201ENST00000233573 APBB1O00213 710 aa19.79■□□□□ 0.76
ITGA4-201ENST00000233573 RBM25P49756 843 aaKnown RBP19.79■□□□□ 0.76
ITGA4-201ENST00000233573 POLA2Q14181 598 aa19.79■□□□□ 0.76
ITGA4-201ENST00000233573 OSBPL3Q9H4L5 887 aa19.79■□□□□ 0.76
ITGA4-201ENST00000233573 MAP3K2Q9Y2U5 619 aa19.79■□□□□ 0.76
ITGA4-201ENST00000233573 SALL3Q9BXA9 1300 aa19.79■□□□□ 0.76
ITGA4-201ENST00000233573 CCDC9Q9Y3X0 531 aaKnown RBP19.79■□□□□ 0.76
ITGA4-201ENST00000233573 TUBGCP6Q96RT7 1819 aa19.79■□□□□ 0.76
ITGA4-201ENST00000233573 LRP6O75581 1613 aa19.78■□□□□ 0.76
ITGA4-201ENST00000233573 CDC45O75419 566 aa19.78■□□□□ 0.76
ITGA4-201ENST00000233573 ALDH1L1O75891 902 aa19.78■□□□□ 0.76
ITGA4-201ENST00000233573 PAPPAQ13219 1627 aa19.78■□□□□ 0.76
ITGA4-201ENST00000233573 FMNL2Q96PY5 1086 aa19.77■□□□□ 0.76
ITGA4-201ENST00000233573 LAMB4A4D0S4 1761 aa19.77■□□□□ 0.76
ITGA4-201ENST00000233573 UBR2Q8IWV8 1755 aa19.77■□□□□ 0.76
ITGA4-201ENST00000233573 BECN1Q14457 450 aa19.77■□□□□ 0.75
ITGA4-201ENST00000233573 USP16Q9Y5T5 823 aa19.77■□□□□ 0.75
ITGA4-201ENST00000233573 SPATA31A5Q5VU36 1347 aa19.77■□□□□ 0.75
ITGA4-201ENST00000233573 SPATA31A7Q8IWB4 1347 aa19.77■□□□□ 0.75
ITGA4-201ENST00000233573 HSPA1LP34931 641 aa19.76■□□□□ 0.75
ITGA4-201ENST00000233573 PIP4K2AP48426 406 aaPredicted RBP19.76■□□□□ 0.75
ITGA4-201ENST00000233573 LRP10Q7Z4F1 713 aa19.76■□□□□ 0.75
ITGA4-201ENST00000233573 LRRCC1Q9C099 1032 aa19.76■□□□□ 0.75
ITGA4-201ENST00000233573 TNS2Q63HR2 1409 aa19.76■□□□□ 0.75
ITGA4-201ENST00000233573 EXOC5O00471 708 aa19.75■□□□□ 0.75
ITGA4-201ENST00000233573 PPP1R42Q7Z4L9 355 aa19.75■□□□□ 0.75
ITGA4-201ENST00000233573 NGLY1Q96IV0 654 aa19.75■□□□□ 0.75
ITGA4-201ENST00000233573 KCPQ6ZWJ8 1503 aa19.75■□□□□ 0.75
ITGA4-201ENST00000233573 ITGB4P16144 1822 aa19.75■□□□□ 0.75
ITGA4-201ENST00000233573 SNRPA1P09661 255 aaKnown RBP19.75■□□□□ 0.75
ITGA4-201ENST00000233573 TBC1D2Q9BYX2 928 aa19.75■□□□□ 0.75
ITGA4-201ENST00000233573 PDE1AP54750 535 aa19.74■□□□□ 0.75
ITGA4-201ENST00000233573 NBR1Q14596 966 aa19.74■□□□□ 0.75
ITGA4-201ENST00000233573 KAT6BQ8WYB5 2073 aa19.74■□□□□ 0.75
ITGA4-201ENST00000233573 TMOD3Q9NYL9 352 aa19.74■□□□□ 0.75
ITGA4-201ENST00000233573 BCL9LQ86UU0 1499 aa19.74■□□□□ 0.75
ITGA4-201ENST00000233573 PTCD1O75127 700 aaKnown RBP19.74■□□□□ 0.75
ITGA4-201ENST00000233573 MYL6BP14649 208 aa19.74■□□□□ 0.75
ITGA4-201ENST00000233573 SDSP20132 328 aa19.74■□□□□ 0.75
ITGA4-201ENST00000233573 MTX1Q13505 466 aa19.74■□□□□ 0.75
ITGA4-201ENST00000233573 UNC5CLQ8IV45 518 aa19.74■□□□□ 0.75
ITGA4-201ENST00000233573 UTYO14607 1347 aa19.73■□□□□ 0.75
ITGA4-201ENST00000233573 LINS1Q8NG48 757 aa19.73■□□□□ 0.75
ITGA4-201ENST00000233573 PIGBQ92521 554 aa19.73■□□□□ 0.75
ITGA4-201ENST00000233573 DDX58O95786 925 aaKnown RBP19.72■□□□□ 0.75
ITGA4-201ENST00000233573 THRAP3Q9Y2W1 955 aaKnown RBP19.72■□□□□ 0.75
ITGA4-201ENST00000233573 AIMP1Q12904 312 aaKnown RBP19.72■□□□□ 0.75
ITGA4-201ENST00000233573 CWF19L2Q2TBE0 894 aaKnown RBP19.72■□□□□ 0.75
ITGA4-201ENST00000233573 BCL11AQ9H165 835 aa19.72■□□□□ 0.75
ITGA4-201ENST00000233573 DDB1Q16531 1140 aa19.71■□□□□ 0.75
ITGA4-201ENST00000233573 KIF2CQ99661 725 aa19.71■□□□□ 0.75
ITGA4-201ENST00000233573 ASAP1Q9ULH1 1129 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms