RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 RASA1P20936 1047 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 ARHGAP4P98171 946 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 EAPPQ56P03 285 aaPredicted RBP5.25□□□□□ -1.57
CDH9-201ENST00000231021 KSR2Q6VAB6 950 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 FAM43AQ8N2R8 423 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 HLA-CQ95604 372 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 ALDH8A1Q9H2A2 487 aaPredicted RBP5.25□□□□□ -1.57
CDH9-201ENST00000231021 HIP1RO75146 1068 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 FGAP02671 866 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 FAM160A1Q05DH4 1040 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 NFX1Q12986 1120 aaKnown RBP5.25□□□□□ -1.57
CDH9-201ENST00000231021 SF3B2Q13435 895 aaKnown RBP5.25□□□□□ -1.57
CDH9-201ENST00000231021 ALDH1L2Q3SY69 923 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 IER5LQ5T953 404 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 CASC1Q6TDU7 716 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 TIFAQ96CG3 184 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 RSPH9Q9H1X1 276 aaPredicted RBP5.25□□□□□ -1.57
CDH9-201ENST00000231021 INPP5FQ9Y2H2 1132 aa5.25□□□□□ -1.57
CDH9-201ENST00000231021 SHTN1A0MZ66 631 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 CLCN1P35523 988 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 PSEN1P49768 467 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 RBL2Q08999 1139 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 DUSP9Q99956 384 aaKnown RBP5.24□□□□□ -1.57
CDH9-201ENST00000231021 TSPYL2Q9H2G4 693 aaPredicted RBP5.24□□□□□ -1.57
CDH9-201ENST00000231021 C12orf49Q9H741 205 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 AVENQ9NQS1 362 aaPredicted RBP5.24□□□□□ -1.57
CDH9-201ENST00000231021 PARP2Q9UGN5 583 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 IP6K2Q9UHH9 426 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 NOB1Q9ULX3 412 aaKnown RBP5.24□□□□□ -1.57
CDH9-201ENST00000231021 FCHSD2O94868 740 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 COPB2P35606 906 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 MAPK8P45983 427 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 NUTM2GQ5VZR2 741 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 EGFL6Q8IUX8 553 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 CEP63Q96MT8 703 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 NELL2Q99435 816 aa5.24□□□□□ -1.57
CDH9-201ENST00000231021 SMAD5Q99717 465 aaKnown RBP5.24□□□□□ -1.57
CDH9-201ENST00000231021 BSDC1Q9NW68 430 aaPredicted RBP5.24□□□□□ -1.57
CDH9-201ENST00000231021 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.24□□□□□ -1.57
CDH9-201ENST00000231021 RNASEH2AO75792 299 aaKnown RBP5.23□□□□□ -1.57
CDH9-201ENST00000231021 RASSF7Q02833 373 aa5.23□□□□□ -1.57
CDH9-201ENST00000231021 BRDTQ58F21 947 aaPredicted RBP5.23□□□□□ -1.57
CDH9-201ENST00000231021 EPAS1Q99814 870 aa5.23□□□□□ -1.57
CDH9-201ENST00000231021 EIF2AK1Q9BQI3 630 aaKnown RBP5.23□□□□□ -1.57
CDH9-201ENST00000231021 GPHNQ9NQX3 736 aaPredicted RBP5.23□□□□□ -1.57
CDH9-201ENST00000231021 CLIP1P30622 1438 aa5.23□□□□□ -1.57
CDH9-201ENST00000231021 NCAPD3P42695 1498 aa5.23□□□□□ -1.57
CDH9-201ENST00000231021 ESYT3A0FGR9 886 aa5.23□□□□□ -1.57
CDH9-201ENST00000231021 CDC27P30260 824 aa5.23□□□□□ -1.57
CDH9-201ENST00000231021 GLYCTKQ8IVS8 523 aa5.23□□□□□ -1.57
CDH9-201ENST00000231021 SLC39A7Q92504 469 aa5.23□□□□□ -1.57
CDH9-201ENST00000231021 SRPK1Q96SB4 655 aaKnown RBP5.23□□□□□ -1.57
CDH9-201ENST00000231021 ARNT2Q9HBZ2 717 aa5.23□□□□□ -1.57
CDH9-201ENST00000231021 INMTO95050 263 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 EFCAB2Q5VUJ9 269 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 ZCCHC8Q6NZY4 707 aaKnown RBP5.22□□□□□ -1.57
CDH9-201ENST00000231021 RIC3Q7Z5B4 369 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 FAM174AQ8TBP5 190 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 MYCBPQ99417 103 aaPredicted RBP5.22□□□□□ -1.57
CDH9-201ENST00000231021 NEUROD4Q9HD90 331 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 MRPS23Q9Y3D9 190 aaKnown RBP5.22□□□□□ -1.57
CDH9-201ENST00000231021 NBNO60934 754 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 BRD3Q15059 726 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 IL31Q6EBC2 164 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 ERAP2Q6P179 960 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 DNMT3AQ9Y6K1 912 aaPredicted RBP5.22□□□□□ -1.57
CDH9-201ENST00000231021 A6NCN8 305 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 FGRP09769 529 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 SEC13P55735 322 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 XPCQ01831 940 aaPredicted RBP5.22□□□□□ -1.57
CDH9-201ENST00000231021 POU5F1Q01860 360 aaKnown RBP5.22□□□□□ -1.57
CDH9-201ENST00000231021 PPP2R2DQ66LE6 453 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 ASB16Q96NS5 453 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 NPDC1Q9NQX5 325 aaPredicted RBP5.22□□□□□ -1.57
CDH9-201ENST00000231021 SCINQ9Y6U3 715 aa5.22□□□□□ -1.57
CDH9-201ENST00000231021 ARAP1Q96P48 1450 aa5.21□□□□□ -1.57
CDH9-201ENST00000231021 USP17L3A6NCW0 530 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 USP17L4A6NCW7 530 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 ELL2O00472 640 aaPredicted RBP5.21□□□□□ -1.58
CDH9-201ENST00000231021 POTEIP0CG38 1075 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 POU3F3P20264 500 aaPredicted RBP5.21□□□□□ -1.58
CDH9-201ENST00000231021 NEK3P51956 506 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 GUCA2AQ02747 115 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 USP17L2Q6R6M4 530 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 USP17L1Q7RTZ2 530 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 TMC7Q7Z402 723 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 MYRIPQ8NFW9 859 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 NKX2-3Q8TAU0 364 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 CD248Q9HCU0 757 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.21□□□□□ -1.58
CDH9-201ENST00000231021 EVLQ9UI08 416 aaPredicted RBP5.21□□□□□ -1.58
CDH9-201ENST00000231021 IFRD1O00458 451 aaPredicted RBP5.21□□□□□ -1.58
CDH9-201ENST00000231021 RRP9O43818 475 aaKnown RBP5.21□□□□□ -1.58
CDH9-201ENST00000231021 RAB27AP51159 221 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 TMEM259Q4ZIN3 620 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 SH3TC2Q8TF17 1288 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 JPH3Q8WXH2 748 aaPredicted RBP5.21□□□□□ -1.58
CDH9-201ENST00000231021 CXorf56Q9H5V9 222 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 MAP3K1Q13233 1512 aa5.21□□□□□ -1.58
CDH9-201ENST00000231021 VGLL3A8MV65 326 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms