RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 TEFQ10587 303 aa20.92■□□□□ 0.94
GAPDH-201ENST00000229239 F6X3S4 739 aa20.92■□□□□ 0.94
GAPDH-201ENST00000229239 KRT27Q7Z3Y8 459 aa20.92■□□□□ 0.94
GAPDH-201ENST00000229239 THSD7AQ9UPZ6 1657 aa20.92■□□□□ 0.94
GAPDH-201ENST00000229239 CDC45O75419 566 aa20.91■□□□□ 0.94
GAPDH-201ENST00000229239 AXIN2Q9Y2T1 843 aa20.91■□□□□ 0.94
GAPDH-201ENST00000229239 TBC1D2Q9BYX2 928 aa20.9■□□□□ 0.94
GAPDH-201ENST00000229239 RNMTO43148 476 aaKnown RBP20.9■□□□□ 0.94
GAPDH-201ENST00000229239 NFKBIBQ15653 356 aa20.9■□□□□ 0.94
GAPDH-201ENST00000229239 LGR6Q9HBX8 967 aa20.9■□□□□ 0.94
GAPDH-201ENST00000229239 COL5A2P05997 1499 aaPredicted RBP20.9■□□□□ 0.94
GAPDH-201ENST00000229239 TTC22Q5TAA0 569 aa20.89■□□□□ 0.93
GAPDH-201ENST00000229239 ERBB3P21860 1342 aa20.89■□□□□ 0.93
GAPDH-201ENST00000229239 COL18A1P39060 1754 aa20.88■□□□□ 0.93
GAPDH-201ENST00000229239 ADAMTS7Q9UKP4 1686 aa20.88■□□□□ 0.93
GAPDH-201ENST00000229239 BTBD11A6QL63 1104 aa20.88■□□□□ 0.93
GAPDH-201ENST00000229239 BARGINQ6ZT62 677 aa20.88■□□□□ 0.93
GAPDH-201ENST00000229239 TBC1D9Q6ZT07 1266 aa20.87■□□□□ 0.93
GAPDH-201ENST00000229239 DEKP35659 375 aaKnown RBP20.86■□□□□ 0.93
GAPDH-201ENST00000229239 CCDC125Q86Z20 511 aa20.86■□□□□ 0.93
GAPDH-201ENST00000229239 THRAP3Q9Y2W1 955 aaKnown RBP20.86■□□□□ 0.93
GAPDH-201ENST00000229239 GSPT1P15170 499 aaKnown RBP20.86■□□□□ 0.93
GAPDH-201ENST00000229239 ATP8B2P98198 1209 aa20.86■□□□□ 0.93
GAPDH-201ENST00000229239 TOM1L2Q6ZVM7 507 aa20.86■□□□□ 0.93
GAPDH-201ENST00000229239 SNX21Q969T3 373 aa20.86■□□□□ 0.93
GAPDH-201ENST00000229239 OSBPL3Q9H4L5 887 aa20.86■□□□□ 0.93
GAPDH-201ENST00000229239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.85■□□□□ 0.93
GAPDH-201ENST00000229239 HEG1Q9ULI3 1381 aa20.85■□□□□ 0.93
GAPDH-201ENST00000229239 WDR17Q8IZU2 1322 aa20.84■□□□□ 0.93
GAPDH-201ENST00000229239 MPRIPQ6WCQ1 1025 aa20.84■□□□□ 0.93
GAPDH-201ENST00000229239 NECTIN2Q92692 538 aa20.84■□□□□ 0.93
GAPDH-201ENST00000229239 ANTXR1Q9H6X2 564 aa20.84■□□□□ 0.93
GAPDH-201ENST00000229239 CSB-PGBD3P0DP91 1061 aa20.83■□□□□ 0.92
GAPDH-201ENST00000229239 CASC1Q6TDU7 716 aa20.83■□□□□ 0.92
GAPDH-201ENST00000229239 HSCBQ8IWL3 235 aa20.83■□□□□ 0.92
GAPDH-201ENST00000229239 SRCIN1Q9C0H9 1055 aa20.82■□□□□ 0.92
GAPDH-201ENST00000229239 DBF4Q9UBU7 674 aaPredicted RBP20.82■□□□□ 0.92
GAPDH-201ENST00000229239 UBTFL1P0CB47 393 aaPredicted RBP20.81■□□□□ 0.92
GAPDH-201ENST00000229239 RAPGEF4Q8WZA2 1011 aa20.81■□□□□ 0.92
GAPDH-201ENST00000229239 USP44Q9H0E7 712 aa20.81■□□□□ 0.92
GAPDH-201ENST00000229239 SIPA1L3O60292 1781 aaPredicted RBP20.81■□□□□ 0.92
GAPDH-201ENST00000229239 RGPD5Q99666 1765 aa20.81■□□□□ 0.92
GAPDH-201ENST00000229239 FAM182BQ5T319 152 aa20.81■□□□□ 0.92
GAPDH-201ENST00000229239 HDAC5Q9UQL6 1122 aa20.81■□□□□ 0.92
GAPDH-201ENST00000229239 C16orf71Q8IYS4 520 aaPredicted RBP20.8■□□□□ 0.92
GAPDH-201ENST00000229239 PHAXQ9H814 394 aaKnown RBP20.8■□□□□ 0.92
GAPDH-201ENST00000229239 IBTKQ9P2D0 1353 aaPredicted RBP20.8■□□□□ 0.92
GAPDH-201ENST00000229239 EIF2S2P20042 333 aaKnown RBP20.79■□□□□ 0.92
GAPDH-201ENST00000229239 LRRCC1Q9C099 1032 aa20.79■□□□□ 0.92
GAPDH-201ENST00000229239 CHPF2Q9P2E5 772 aa20.79■□□□□ 0.92
GAPDH-201ENST00000229239 SPG7Q9UQ90 795 aa20.79■□□□□ 0.92
GAPDH-201ENST00000229239 TATP17735 454 aaPredicted RBP20.79■□□□□ 0.92
GAPDH-201ENST00000229239 DNAAF4Q8WXU2 420 aa20.79■□□□□ 0.92
GAPDH-201ENST00000229239 KCNQ3O43525 872 aa20.78■□□□□ 0.92
GAPDH-201ENST00000229239 GIGYF1O75420 1035 aaPredicted RBP20.78■□□□□ 0.92
GAPDH-201ENST00000229239 CARD10Q9BWT7 1032 aa20.78■□□□□ 0.92
GAPDH-201ENST00000229239 LRRFIP2Q9Y608 721 aaKnown RBP20.78■□□□□ 0.92
GAPDH-201ENST00000229239 SMARCA5O60264 1052 aaPredicted RBP20.77■□□□□ 0.92
GAPDH-201ENST00000229239 SF3B2Q13435 895 aaKnown RBP20.77■□□□□ 0.92
GAPDH-201ENST00000229239 SSH3Q8TE77 659 aa20.77■□□□□ 0.92
GAPDH-201ENST00000229239 BEND3Q5T5X7 828 aa20.77■□□□□ 0.92
GAPDH-201ENST00000229239 RAB11FIP3O75154 756 aa20.76■□□□□ 0.91
GAPDH-201ENST00000229239 SDSP20132 328 aa20.76■□□□□ 0.91
GAPDH-201ENST00000229239 PDE1AP54750 535 aa20.76■□□□□ 0.91
GAPDH-201ENST00000229239 OTUD7AQ8TE49 926 aaPredicted RBP20.76■□□□□ 0.91
GAPDH-201ENST00000229239 NLRP2Q9NX02 1062 aa20.76■□□□□ 0.91
GAPDH-201ENST00000229239 PARP4Q9UKK3 1724 aaKnown RBP20.76■□□□□ 0.91
GAPDH-201ENST00000229239 AOX1Q06278 1338 aa20.76■□□□□ 0.91
GAPDH-201ENST00000229239 SALL3Q9BXA9 1300 aa20.76■□□□□ 0.91
GAPDH-201ENST00000229239 PNMA6EA0A0J9YXQ4 647 aa20.75■□□□□ 0.91
GAPDH-201ENST00000229239 SLKQ9H2G2 1235 aaPredicted RBP20.75■□□□□ 0.91
GAPDH-201ENST00000229239 HYPKQ9NX55 129 aa20.75■□□□□ 0.91
GAPDH-201ENST00000229239 ALDH1L1O75891 902 aa20.75■□□□□ 0.91
GAPDH-201ENST00000229239 FAM196AQ6ZSG2 479 aa20.75■□□□□ 0.91
GAPDH-201ENST00000229239 KIF2CQ99661 725 aa20.75■□□□□ 0.91
GAPDH-201ENST00000229239 CDCA7Q9BWT1 371 aaPredicted RBP20.75■□□□□ 0.91
GAPDH-201ENST00000229239 WNK3Q9BYP7 1800 aa20.74■□□□□ 0.91
GAPDH-201ENST00000229239 PI4KAP2A4QPH2 592 aa20.74■□□□□ 0.91
GAPDH-201ENST00000229239 POLA2Q14181 598 aa20.74■□□□□ 0.91
GAPDH-201ENST00000229239 PI4KAP1Q8N8J0 262 aa20.74■□□□□ 0.91
GAPDH-201ENST00000229239 CHMP5Q9NZZ3 219 aa20.74■□□□□ 0.91
GAPDH-201ENST00000229239 EXOC6BQ9Y2D4 811 aa20.74■□□□□ 0.91
GAPDH-201ENST00000229239 APBB1O00213 710 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 PHKG2P15735 406 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 IFNL2Q8IZJ0 200 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 STAP2Q9UGK3 403 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 ADCY9O60503 1353 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 SCN11AQ9UI33 1791 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 TNS1Q9HBL0 1735 aaKnown RBP20.73■□□□□ 0.91
GAPDH-201ENST00000229239 FRAT2O75474 233 aaPredicted RBP20.73■□□□□ 0.91
GAPDH-201ENST00000229239 REC8O95072 547 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 HSP90AB1P08238 724 aaKnown RBP20.73■□□□□ 0.91
GAPDH-201ENST00000229239 DDB1Q16531 1140 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 KSR2Q6VAB6 950 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 SLC52A2Q9HAB3 445 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 MRC1P22897 1456 aa20.73■□□□□ 0.91
GAPDH-201ENST00000229239 DEFB132Q7Z7B7 95 aa20.72■□□□□ 0.91
GAPDH-201ENST00000229239 HSP90AB4PQ58FF6 505 aa20.71■□□□□ 0.91
GAPDH-201ENST00000229239 MEGF6O75095 1541 aa20.71■□□□□ 0.91
GAPDH-201ENST00000229239 KDM6AO15550 1401 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms