RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 INTS4Q96HW7 963 aaKnown RBP17.19■□□□□ 0.34
PRDM4-201ENST00000228437 USP16Q9Y5T5 823 aa17.19■□□□□ 0.34
PRDM4-201ENST00000228437 TPM4P67936 248 aa17.18■□□□□ 0.34
PRDM4-201ENST00000228437 BLOC1S2Q6QNY1 142 aa17.18■□□□□ 0.34
PRDM4-201ENST00000228437 NOL10Q9BSC4 688 aaKnown RBP17.18■□□□□ 0.34
PRDM4-201ENST00000228437 LIG1P18858 919 aa17.18■□□□□ 0.34
PRDM4-201ENST00000228437 TAF3Q5VWG9 929 aa17.18■□□□□ 0.34
PRDM4-201ENST00000228437 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
PRDM4-201ENST00000228437 ARGLU1Q9NWB6 273 aaPredicted RBP17.18■□□□□ 0.34
PRDM4-201ENST00000228437 PDCP20941 246 aa17.18■□□□□ 0.34
PRDM4-201ENST00000228437 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 FEZ1Q99689 392 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 CD109Q6YHK3 1445 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 ZNF518AQ6AHZ1 1483 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 SMTNL1A8MU46 457 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 URI1O94763 535 aaPredicted RBP17.17■□□□□ 0.34
PRDM4-201ENST00000228437 UBXN4Q92575 508 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 TRIM34Q9BYJ4 488 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 LRRC2Q9BYS8 371 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 ZNF215Q9UL58 517 aaPredicted RBP17.17■□□□□ 0.34
PRDM4-201ENST00000228437 ABCC4O15439 1325 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 IDI1Q13907 227 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 CBX8Q9HC52 389 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 PPP1R42Q7Z4L9 355 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 CERS3Q8IU89 383 aa17.17■□□□□ 0.34
PRDM4-201ENST00000228437 FLIIQ13045 1269 aa17.16■□□□□ 0.34
PRDM4-201ENST00000228437 ZSWIM4Q9H7M6 989 aa17.16■□□□□ 0.34
PRDM4-201ENST00000228437 RNF20Q5VTR2 975 aa17.16■□□□□ 0.34
PRDM4-201ENST00000228437 NGDNQ8NEJ9 315 aaKnown RBP17.16■□□□□ 0.34
PRDM4-201ENST00000228437 AACSQ86V21 672 aa17.15■□□□□ 0.34
PRDM4-201ENST00000228437 CCDC8Q9H0W5 538 aaPredicted RBP17.15■□□□□ 0.34
PRDM4-201ENST00000228437 BOLA2Q9H3K6 86 aa17.15■□□□□ 0.34
PRDM4-201ENST00000228437 GPS2Q13227 327 aa17.15■□□□□ 0.34
PRDM4-201ENST00000228437 UGGT1Q9NYU2 1555 aa17.14■□□□□ 0.34
PRDM4-201ENST00000228437 RASEFQ8IZ41 740 aa17.14■□□□□ 0.33
PRDM4-201ENST00000228437 CALCOCO1Q9P1Z2 691 aa17.14■□□□□ 0.33
PRDM4-201ENST00000228437 PAXBP1Q9Y5B6 917 aa17.14■□□□□ 0.33
PRDM4-201ENST00000228437 SNX14Q9Y5W7 946 aa17.14■□□□□ 0.33
PRDM4-201ENST00000228437 HSP90AA4PQ58FG1 418 aa17.14■□□□□ 0.33
PRDM4-201ENST00000228437 CFAP65Q6ZU64 1925 aaKnown RBP17.14■□□□□ 0.33
PRDM4-201ENST00000228437 ANAPC15P60006 121 aa17.14■□□□□ 0.33
PRDM4-201ENST00000228437 ARID5BQ14865 1188 aa17.14■□□□□ 0.33
PRDM4-201ENST00000228437 E9PCH4 1651 aa17.14■□□□□ 0.33
PRDM4-201ENST00000228437 G3BP1Q13283 466 aaKnown RBP eCLIP17.13■□□□□ 0.33
PRDM4-201ENST00000228437 TMCO3Q6UWJ1 677 aa17.13■□□□□ 0.33
PRDM4-201ENST00000228437 CCDC69A6NI79 296 aa17.13■□□□□ 0.33
PRDM4-201ENST00000228437 RAPGEF3O95398 923 aa17.13■□□□□ 0.33
PRDM4-201ENST00000228437 NCBP1Q09161 790 aaKnown RBP17.13■□□□□ 0.33
PRDM4-201ENST00000228437 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
PRDM4-201ENST00000228437 DNAJC2Q99543 621 aaKnown RBP17.13■□□□□ 0.33
PRDM4-201ENST00000228437 TMC6Q7Z403 805 aa17.13■□□□□ 0.33
PRDM4-201ENST00000228437 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
PRDM4-201ENST00000228437 PSMA5P28066 241 aa17.13■□□□□ 0.33
PRDM4-201ENST00000228437 NSD2O96028 1365 aa17.13■□□□□ 0.33
PRDM4-201ENST00000228437 SNW1Q13573 536 aaKnown RBP17.12■□□□□ 0.33
PRDM4-201ENST00000228437 SYT10Q6XYQ8 523 aa17.12■□□□□ 0.33
PRDM4-201ENST00000228437 TEFQ10587 303 aa17.12■□□□□ 0.33
PRDM4-201ENST00000228437 CDC37L1Q7L3B6 337 aa17.12■□□□□ 0.33
PRDM4-201ENST00000228437 ZNF397Q8NF99 534 aaPredicted RBP17.12■□□□□ 0.33
PRDM4-201ENST00000228437 ZSCAN31Q96LW9 406 aaPredicted RBP17.12■□□□□ 0.33
PRDM4-201ENST00000228437 SCAND2PQ9GZW5 306 aaPredicted RBP17.12■□□□□ 0.33
PRDM4-201ENST00000228437 KCNF1Q9H3M0 494 aa17.12■□□□□ 0.33
PRDM4-201ENST00000228437 ST7Q9NRC1 585 aa17.12■□□□□ 0.33
PRDM4-201ENST00000228437 LARGE1O95461 756 aa17.12■□□□□ 0.33
PRDM4-201ENST00000228437 ZSCAN25Q6NSZ9 544 aa17.12■□□□□ 0.33
PRDM4-201ENST00000228437 RHPN1Q8TCX5 695 aa17.12■□□□□ 0.33
PRDM4-201ENST00000228437 DUOX2Q9NRD8 1548 aa17.12■□□□□ 0.33
PRDM4-201ENST00000228437 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
PRDM4-201ENST00000228437 TAF7Q15545 349 aaPredicted RBP17.11■□□□□ 0.33
PRDM4-201ENST00000228437 TTC6Q86TZ1 520 aa17.11■□□□□ 0.33
PRDM4-201ENST00000228437 RUFY3Q7L099 469 aa17.11■□□□□ 0.33
PRDM4-201ENST00000228437 CCDC34Q96HJ3 373 aa17.11■□□□□ 0.33
PRDM4-201ENST00000228437 CCT2P78371 535 aaKnown RBP17.1■□□□□ 0.33
PRDM4-201ENST00000228437 DNAI1Q9UI46 699 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
PRDM4-201ENST00000228437 RTL1A6NKG5 1358 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 SFPQP23246 707 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRDM4-201ENST00000228437 ZNF75DP51815 510 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 ARHGAP29Q52LW3 1261 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 CACTINQ8WUQ7 758 aaKnown RBP17.1■□□□□ 0.33
PRDM4-201ENST00000228437 CLASP1Q7Z460 1538 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 ERCC6LQ2NKX8 1250 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 CEP57L1Q8IYX8 460 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 KIF1BPQ96EK5 621 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 SLU7O95391 586 aaKnown RBP17.1■□□□□ 0.33
PRDM4-201ENST00000228437 SERPINC1P01008 464 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 CUL4AQ13619 759 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 AOPEPQ8N6M6 819 aa17.1■□□□□ 0.33
PRDM4-201ENST00000228437 DDX19AQ9NUU7 478 aaKnown RBP17.1■□□□□ 0.33
PRDM4-201ENST00000228437 FAM69CQ0P6D2 419 aa17.09■□□□□ 0.33
PRDM4-201ENST00000228437 PTPRCP08575 1304 aa17.09■□□□□ 0.33
PRDM4-201ENST00000228437 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
PRDM4-201ENST00000228437 NAT10Q9H0A0 1025 aaKnown RBP17.09■□□□□ 0.33
PRDM4-201ENST00000228437 PA2G4Q9UQ80 394 aaKnown RBP17.09■□□□□ 0.33
PRDM4-201ENST00000228437 BMS1Q14692 1282 aaKnown RBP17.08■□□□□ 0.33
PRDM4-201ENST00000228437 STK38Q15208 465 aa17.08■□□□□ 0.33
PRDM4-201ENST00000228437 RAB11FIP4Q86YS3 637 aa17.08■□□□□ 0.33
PRDM4-201ENST00000228437 C10orf67Q8IYJ2 551 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms