RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 VSIG10Q8N0Z9 540 aa29.43■■■□□ 2.3
USF2-201ENST00000222305 DNAJC10Q8IXB1 793 aa29.42■■■□□ 2.3
USF2-201ENST00000222305 COL5A3P25940 1745 aaPredicted RBP29.42■■■□□ 2.3
USF2-201ENST00000222305 ANXA1P04083 346 aa29.42■■■□□ 2.3
USF2-201ENST00000222305 TNS1Q9HBL0 1735 aaKnown RBP29.41■■■□□ 2.3
USF2-201ENST00000222305 LOC102724428A0A0B4J2F2 783 aa29.41■■■□□ 2.3
USF2-201ENST00000222305 SIK1P57059 783 aa29.41■■■□□ 2.3
USF2-201ENST00000222305 CHMP4AQ9BY43 222 aa29.41■■■□□ 2.3
USF2-201ENST00000222305 TNNQ9UQP3 1299 aa29.41■■■□□ 2.3
USF2-201ENST00000222305 G2E3Q7L622 706 aa29.4■■■□□ 2.3
USF2-201ENST00000222305 PROSER3Q2NL68 480 aa29.39■■■□□ 2.3
USF2-201ENST00000222305 TAF1LQ8IZX4 1826 aa29.39■■■□□ 2.29
USF2-201ENST00000222305 PIP4K2AP48426 406 aaPredicted RBP29.38■■■□□ 2.29
USF2-201ENST00000222305 C20orf194Q5TEA3 1177 aa29.38■■■□□ 2.29
USF2-201ENST00000222305 ZKSCAN2Q63HK3 967 aa29.38■■■□□ 2.29
USF2-201ENST00000222305 DBF4Q9UBU7 674 aaPredicted RBP29.38■■■□□ 2.29
USF2-201ENST00000222305 NEFLP07196 543 aa29.38■■■□□ 2.29
USF2-201ENST00000222305 ATP6V1AP38606 617 aa29.38■■■□□ 2.29
USF2-201ENST00000222305 PDIA6Q15084 440 aa29.37■■■□□ 2.29
USF2-201ENST00000222305 TEX13AQ9BXU3 409 aaPredicted RBP29.37■■■□□ 2.29
USF2-201ENST00000222305 PHAXQ9H814 394 aaKnown RBP29.36■■■□□ 2.29
USF2-201ENST00000222305 MYH14Q7Z406 1995 aaKnown RBP29.36■■■□□ 2.29
USF2-201ENST00000222305 TRIM27P14373 513 aa29.35■■■□□ 2.29
USF2-201ENST00000222305 ATF7IPQ6VMQ6 1270 aa29.35■■■□□ 2.29
USF2-201ENST00000222305 DDX21Q9NR30 783 aaKnown RBP eCLIP29.35■■■□□ 2.29
USF2-201ENST00000222305 IPO8O15397 1037 aaKnown RBP29.34■■■□□ 2.29
USF2-201ENST00000222305 A1BGP04217 495 aa29.34■■■□□ 2.29
USF2-201ENST00000222305 MYL6BP14649 208 aa29.34■■■□□ 2.29
USF2-201ENST00000222305 ITPK1Q13572 414 aa29.34■■■□□ 2.29
USF2-201ENST00000222305 CLUAP1Q96AJ1 413 aa29.34■■■□□ 2.29
USF2-201ENST00000222305 KCNQ4P56696 695 aa29.34■■■□□ 2.29
USF2-201ENST00000222305 FLIIQ13045 1269 aa29.34■■■□□ 2.29
USF2-201ENST00000222305 CYP19A1P11511 503 aaPredicted RBP29.33■■■□□ 2.29
USF2-201ENST00000222305 RREB1Q92766 1687 aa29.32■■■□□ 2.28
USF2-201ENST00000222305 NBPF26B4DH59 902 aa29.32■■■□□ 2.28
USF2-201ENST00000222305 STARD3NLO95772 234 aa29.32■■■□□ 2.28
USF2-201ENST00000222305 FKBP8Q14318 412 aa29.32■■■□□ 2.28
USF2-201ENST00000222305 NBPF14Q5TI25 921 aa29.32■■■□□ 2.28
USF2-201ENST00000222305 NBPF10Q6P3W6 841 aaKnown RBP29.32■■■□□ 2.28
USF2-201ENST00000222305 NBPF15Q8N660 670 aa29.32■■■□□ 2.28
USF2-201ENST00000222305 PTPRCP08575 1304 aa29.32■■■□□ 2.28
USF2-201ENST00000222305 PANK1Q8TE04 598 aa29.31■■■□□ 2.28
USF2-201ENST00000222305 ARHGAP45Q92619 1136 aa29.31■■■□□ 2.28
USF2-201ENST00000222305 HYPKQ9NX55 129 aa29.31■■■□□ 2.28
USF2-201ENST00000222305 ERBB4Q15303 1308 aa29.31■■■□□ 2.28
USF2-201ENST00000222305 RLBP1P12271 317 aa29.31■■■□□ 2.28
USF2-201ENST00000222305 FKBP5Q13451 457 aaPredicted RBP29.29■■■□□ 2.28
USF2-201ENST00000222305 PDE3AQ14432 1141 aa29.29■■■□□ 2.28
USF2-201ENST00000222305 LRP10Q7Z4F1 713 aa29.29■■■□□ 2.28
USF2-201ENST00000222305 FTSJ3Q8IY81 847 aaKnown RBP29.29■■■□□ 2.28
USF2-201ENST00000222305 DZIP1LQ8IYY4 767 aaKnown RBP29.29■■■□□ 2.28
USF2-201ENST00000222305 CCNL1Q9UK58 526 aaPredicted RBP29.29■■■□□ 2.28
USF2-201ENST00000222305 APBA3O96018 575 aa29.28■■■□□ 2.28
USF2-201ENST00000222305 API5Q9BZZ5 524 aaKnown RBP29.28■■■□□ 2.28
USF2-201ENST00000222305 GTF3C3Q9Y5Q9 886 aa29.27■■■□□ 2.28
USF2-201ENST00000222305 N4BP2Q86UW6 1770 aaPredicted RBP29.27■■■□□ 2.28
USF2-201ENST00000222305 AIMP1Q12904 312 aaKnown RBP29.27■■■□□ 2.28
USF2-201ENST00000222305 LINC00116Q8NCU8 138 aa29.27■■■□□ 2.28
USF2-201ENST00000222305 ARFGEF2Q9Y6D5 1785 aa29.26■■■□□ 2.27
USF2-201ENST00000222305 CRBNQ96SW2 442 aa29.26■■■□□ 2.27
USF2-201ENST00000222305 ZBTB1Q9Y2K1 713 aa29.26■■■□□ 2.27
USF2-201ENST00000222305 RGPD3A6NKT7 1758 aaPredicted RBP29.25■■■□□ 2.27
USF2-201ENST00000222305 RGPD4Q7Z3J3 1758 aa29.25■■■□□ 2.27
USF2-201ENST00000222305 F6X3S4 739 aa29.25■■■□□ 2.27
USF2-201ENST00000222305 CRKLP46109 303 aaKnown RBP29.25■■■□□ 2.27
USF2-201ENST00000222305 XAGE3Q8WTP9 111 aa29.25■■■□□ 2.27
USF2-201ENST00000222305 C4BP0C0L5 1744 aa29.25■■■□□ 2.27
USF2-201ENST00000222305 ABCC4O15439 1325 aa29.24■■■□□ 2.27
USF2-201ENST00000222305 NUP188Q5SRE5 1749 aa29.24■■■□□ 2.27
USF2-201ENST00000222305 MS4A1P11836 297 aa29.23■■■□□ 2.27
USF2-201ENST00000222305 COPS6Q7L5N1 327 aa29.23■■■□□ 2.27
USF2-201ENST00000222305 CCDC87Q9NVE4 849 aa29.23■■■□□ 2.27
USF2-201ENST00000222305 COG6Q9Y2V7 657 aa29.23■■■□□ 2.27
USF2-201ENST00000222305 ZNF330Q9Y3S2 320 aaPredicted RBP29.23■■■□□ 2.27
USF2-201ENST00000222305 INTS5Q6P9B9 1019 aaKnown RBP29.23■■■□□ 2.27
USF2-201ENST00000222305 TMEM57Q8N5G2 664 aa29.23■■■□□ 2.27
USF2-201ENST00000222305 EXOC6Q8TAG9 804 aa29.22■■■□□ 2.27
USF2-201ENST00000222305 LRRC4BQ9NT99 713 aa29.22■■■□□ 2.27
USF2-201ENST00000222305 ADCY9O60503 1353 aa29.22■■■□□ 2.27
USF2-201ENST00000222305 ILDR2Q71H61 639 aa29.21■■■□□ 2.27
USF2-201ENST00000222305 PI4KAP2A4QPH2 592 aa29.2■■■□□ 2.26
USF2-201ENST00000222305 PI4KAP1Q8N8J0 262 aa29.2■■■□□ 2.26
USF2-201ENST00000222305 PLSCR1O15162 318 aa29.19■■■□□ 2.26
USF2-201ENST00000222305 SLC4A10Q6U841 1118 aa29.19■■■□□ 2.26
USF2-201ENST00000222305 CNTNAP4Q9C0A0 1308 aa29.18■■■□□ 2.26
USF2-201ENST00000222305 SF3B2Q13435 895 aaKnown RBP29.18■■■□□ 2.26
USF2-201ENST00000222305 TXNRD1Q16881 649 aa29.18■■■□□ 2.26
USF2-201ENST00000222305 TTLL7Q6ZT98 887 aa29.18■■■□□ 2.26
USF2-201ENST00000222305 ITPRIPQ8IWB1 547 aa29.18■■■□□ 2.26
USF2-201ENST00000222305 PXDNLA1KZ92 1463 aa29.18■■■□□ 2.26
USF2-201ENST00000222305 AFDNP55196 1824 aaKnown RBP29.17■■■□□ 2.26
USF2-201ENST00000222305 DDX58O95786 925 aaKnown RBP29.17■■■□□ 2.26
USF2-201ENST00000222305 MVPQ14764 893 aaKnown RBP29.17■■■□□ 2.26
USF2-201ENST00000222305 SLC27A3Q5K4L6 730 aa29.17■■■□□ 2.26
USF2-201ENST00000222305 PROM2Q8N271 834 aa29.17■■■□□ 2.26
USF2-201ENST00000222305 IL6STP40189 918 aaPredicted RBP29.16■■■□□ 2.26
USF2-201ENST00000222305 KSR2Q6VAB6 950 aa29.16■■■□□ 2.26
USF2-201ENST00000222305 MAP3K2Q9Y2U5 619 aa29.16■■■□□ 2.26
USF2-201ENST00000222305 EN1Q05925 392 aaPredicted RBP29.16■■■□□ 2.26
USF2-201ENST00000222305 DNAAF4Q8WXU2 420 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms