RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 NBPF6Q5VWK0 638 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 NBPF4Q96M43 638 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 PDCP20941 246 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
CRX-201ENST00000221996 USP19O94966 1318 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 PNMA6EA0A0J9YXQ4 647 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 IL17REQ8NFR9 667 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 TMX3Q96JJ7 454 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 USP6P35125 1406 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 FAM177BA6PVY3 158 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 ATP5J2-PTCD1G3V325 749 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 CABLES1Q8TDN4 633 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 CHMP4CQ96CF2 233 aa11.7□□□□□ -0.54
CRX-201ENST00000221996 A0A087WZG4 1122 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 TRDNQ13061 729 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 CWF19L2Q2TBE0 894 aaKnown RBP11.69□□□□□ -0.54
CRX-201ENST00000221996 KSR2Q6VAB6 950 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 CCDC83Q8IWF9 413 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 PA2G4Q9UQ80 394 aaKnown RBP11.69□□□□□ -0.54
CRX-201ENST00000221996 ADGRB1O14514 1584 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 CDK12Q9NYV4 1490 aaPredicted RBP11.69□□□□□ -0.54
CRX-201ENST00000221996 PNPLA6Q8IY17 1366 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 GSPT1P15170 499 aaKnown RBP11.69□□□□□ -0.54
CRX-201ENST00000221996 LARP1BQ659C4 914 aaKnown RBP11.69□□□□□ -0.54
CRX-201ENST00000221996 PTPRMP28827 1452 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 CCDC173Q0VFZ6 552 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 UBE3BQ7Z3V4 1068 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 TSPY26PQ9H489 355 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 RTL1A6NKG5 1358 aa11.69□□□□□ -0.54
CRX-201ENST00000221996 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
CRX-201ENST00000221996 PIP4K2AP48426 406 aaPredicted RBP11.68□□□□□ -0.54
CRX-201ENST00000221996 RALYLQ86SE5 291 aaKnown RBP11.68□□□□□ -0.54
CRX-201ENST00000221996 XAGE3Q8WTP9 111 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 DEPDC5O75140 1603 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 RNMTO43148 476 aaKnown RBP11.68□□□□□ -0.54
CRX-201ENST00000221996 COPS6Q7L5N1 327 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 SIRT2Q8IXJ6 389 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 SYCE3A1L190 88 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 RAB3GAP1Q15042 981 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 CCDC57Q2TAC2 916 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 GRM8O00222 908 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 ALDH1L1O75891 902 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 ANKRD1Q15327 319 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 CPLX2Q6PUV4 134 aaKnown RBP11.68□□□□□ -0.54
CRX-201ENST00000221996 CEP126Q9P2H0 1117 aa11.68□□□□□ -0.54
CRX-201ENST00000221996 FKBP4Q02790 459 aaKnown RBP eCLIP11.67□□□□□ -0.54
CRX-201ENST00000221996 ANKRD13DQ6ZTN6 518 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 CADPS2Q86UW7 1296 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 ZGPATQ8N5A5 531 aaKnown RBP11.67□□□□□ -0.54
CRX-201ENST00000221996 NFATC2IPQ8NCF5 419 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 ZSCAN31Q96LW9 406 aaPredicted RBP11.67□□□□□ -0.54
CRX-201ENST00000221996 CHMLP26374 656 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 ARID3AQ99856 593 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 C19orf44Q9H6X5 657 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 GDPD2Q9HCC8 539 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 KIF24Q5T7B8 1368 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 NLRP1Q9C000 1473 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 ARHGEF40Q8TER5 1519 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 GOLGA6L19H0YKK7 550 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 SNRPA1P09661 255 aaKnown RBP11.67□□□□□ -0.54
CRX-201ENST00000221996 CCDC158Q5M9N0 1113 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 EVI5LQ96CN4 794 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 LIMCH1Q9UPQ0 1083 aa11.67□□□□□ -0.54
CRX-201ENST00000221996 BECN2A8MW95 431 aa11.66□□□□□ -0.54
CRX-201ENST00000221996 LINS1Q8NG48 757 aa11.66□□□□□ -0.54
CRX-201ENST00000221996 XRCC6P12956 609 aaKnown RBP eCLIP11.66□□□□□ -0.54
CRX-201ENST00000221996 TTC39AQ5SRH9 613 aa11.66□□□□□ -0.54
CRX-201ENST00000221996 FERMT3Q86UX7 667 aa11.66□□□□□ -0.54
CRX-201ENST00000221996 ZBTB3Q9H5J0 574 aa11.66□□□□□ -0.54
CRX-201ENST00000221996 ESPNB1AK53 854 aa11.66□□□□□ -0.54
CRX-201ENST00000221996 PANK2Q9BZ23 570 aa11.66□□□□□ -0.54
CRX-201ENST00000221996 IGSF1Q8N6C5 1336 aa11.66□□□□□ -0.54
CRX-201ENST00000221996 MROH2AA6NES4 1674 aa11.66□□□□□ -0.54
CRX-201ENST00000221996 NBPF7P0C2Y1 421 aaPredicted RBP11.66□□□□□ -0.54
CRX-201ENST00000221996 CNNM1Q9NRU3 951 aa11.66□□□□□ -0.54
CRX-201ENST00000221996 PIK3C2BO00750 1634 aa11.65□□□□□ -0.54
CRX-201ENST00000221996 CEBPZQ03701 1054 aaKnown RBP11.65□□□□□ -0.54
CRX-201ENST00000221996 KLHL40Q2TBA0 621 aa11.65□□□□□ -0.54
CRX-201ENST00000221996 MED14O60244 1454 aa11.65□□□□□ -0.54
CRX-201ENST00000221996 KCNQ3O43525 872 aa11.65□□□□□ -0.54
CRX-201ENST00000221996 ANAPC15P60006 121 aa11.65□□□□□ -0.54
CRX-201ENST00000221996 EIF4A1P60842 406 aaKnown RBP11.65□□□□□ -0.54
CRX-201ENST00000221996 KRT85P78386 507 aa11.65□□□□□ -0.54
CRX-201ENST00000221996 MPNDQ8N594 471 aa11.65□□□□□ -0.54
CRX-201ENST00000221996 SASS6Q6UVJ0 657 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 SYNE3Q6ZMZ3 975 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 NFXL1Q6ZNB6 911 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 USP44Q9H0E7 712 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 RBM27Q9P2N5 1060 aaKnown RBP11.64□□□□□ -0.55
CRX-201ENST00000221996 LRRC7Q96NW7 1537 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 FRMPD1Q5SYB0 1578 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 KRT32Q14532 448 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 CCDC73Q6ZRK6 1079 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 NPHP3Q7Z494 1330 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 MROH1Q8NDA8 1641 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 TPM4P67936 248 aa11.64□□□□□ -0.55
CRX-201ENST00000221996 FBXW7Q969H0 707 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms