RNA–Protein interactions for RNA: ENST00000221784.8

PDCD5-201, Transcript of programmed cell death 5, humanhuman

TSL 3

Gene PDCD5, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-201ENST00000221784 FCHSD2O94868 740 aa18.47■□□□□ 0.55
PDCD5-201ENST00000221784 TEX13AQ9BXU3 409 aaPredicted RBP18.47■□□□□ 0.55
PDCD5-201ENST00000221784 GPBP1L1Q9HC44 474 aaPredicted RBP18.47■□□□□ 0.55
PDCD5-201ENST00000221784 TJP1Q07157 1748 aa18.46■□□□□ 0.55
PDCD5-201ENST00000221784 SENP3-EIF4A1A0A087X0R7 540 aa18.46■□□□□ 0.55
PDCD5-201ENST00000221784 KCNA3P22001 575 aa18.46■□□□□ 0.55
PDCD5-201ENST00000221784 ARHGAP27Q6ZUM4 889 aa18.46■□□□□ 0.55
PDCD5-201ENST00000221784 PIM2Q9P1W9 311 aa18.46■□□□□ 0.55
PDCD5-201ENST00000221784 ADCY9O60503 1353 aa18.45■□□□□ 0.54
PDCD5-201ENST00000221784 COL15A1P39059 1388 aa18.45■□□□□ 0.54
PDCD5-201ENST00000221784 ADAMTS7Q9UKP4 1686 aa18.45■□□□□ 0.54
PDCD5-201ENST00000221784 NFIXQ14938 502 aa18.45■□□□□ 0.54
PDCD5-201ENST00000221784 ZNF526Q8TF50 670 aaPredicted RBP18.45■□□□□ 0.54
PDCD5-201ENST00000221784 FMNL2Q96PY5 1086 aa18.45■□□□□ 0.54
PDCD5-201ENST00000221784 C4AP0C0L4 1744 aa18.45■□□□□ 0.54
PDCD5-201ENST00000221784 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
PDCD5-201ENST00000221784 HEG1Q9ULI3 1381 aa18.44■□□□□ 0.54
PDCD5-201ENST00000221784 A0A087WZG4 1122 aa18.44■□□□□ 0.54
PDCD5-201ENST00000221784 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
PDCD5-201ENST00000221784 EIF5P55010 431 aaKnown RBP18.44■□□□□ 0.54
PDCD5-201ENST00000221784 RTF1Q92541 710 aaKnown RBP18.44■□□□□ 0.54
PDCD5-201ENST00000221784 BCL2L12Q9HB09 334 aa18.44■□□□□ 0.54
PDCD5-201ENST00000221784 CHRNA5P30532 468 aa18.42■□□□□ 0.54
PDCD5-201ENST00000221784 DALRD3Q5D0E6 543 aaKnown RBP18.42■□□□□ 0.54
PDCD5-201ENST00000221784 KCNQ3O43525 872 aa18.41■□□□□ 0.54
PDCD5-201ENST00000221784 SERPINB2P05120 415 aa18.41■□□□□ 0.54
PDCD5-201ENST00000221784 KIF13BQ9NQT8 1826 aa18.4■□□□□ 0.54
PDCD5-201ENST00000221784 HTATSF1O43719 755 aaKnown RBP18.4■□□□□ 0.54
PDCD5-201ENST00000221784 A1BGP04217 495 aa18.4■□□□□ 0.54
PDCD5-201ENST00000221784 IL6STP40189 918 aaPredicted RBP18.4■□□□□ 0.54
PDCD5-201ENST00000221784 MCM10Q7L590 875 aa18.4■□□□□ 0.54
PDCD5-201ENST00000221784 NPM2Q86SE8 214 aaKnown RBP18.4■□□□□ 0.54
PDCD5-201ENST00000221784 ZNF330Q9Y3S2 320 aaPredicted RBP18.4■□□□□ 0.54
PDCD5-201ENST00000221784 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.53
PDCD5-201ENST00000221784 NEFMP07197 916 aa18.38■□□□□ 0.53
PDCD5-201ENST00000221784 DCTN1Q14203 1278 aa18.38■□□□□ 0.53
PDCD5-201ENST00000221784 TBC1D2BQ9UPU7 963 aa18.38■□□□□ 0.53
PDCD5-201ENST00000221784 USP16Q9Y5T5 823 aa18.38■□□□□ 0.53
PDCD5-201ENST00000221784 KIAA1551Q9HCM1 1747 aa18.37■□□□□ 0.53
PDCD5-201ENST00000221784 N4BP2Q86UW6 1770 aaPredicted RBP18.37■□□□□ 0.53
PDCD5-201ENST00000221784 SNRPA1P09661 255 aaKnown RBP18.36■□□□□ 0.53
PDCD5-201ENST00000221784 TBC1D9BQ66K14 1250 aa18.36■□□□□ 0.53
PDCD5-201ENST00000221784 TAF7Q15545 349 aaPredicted RBP18.35■□□□□ 0.53
PDCD5-201ENST00000221784 C9orf131Q5VYM1 1079 aa18.35■□□□□ 0.53
PDCD5-201ENST00000221784 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
PDCD5-201ENST00000221784 KIF3CO14782 793 aa18.34■□□□□ 0.53
PDCD5-201ENST00000221784 PRAMEF22A3QJZ6 481 aa18.33■□□□□ 0.52
PDCD5-201ENST00000221784 H0YIN7 160 aa18.33■□□□□ 0.52
PDCD5-201ENST00000221784 DZIP3Q86Y13 1208 aaKnown RBP18.33■□□□□ 0.52
PDCD5-201ENST00000221784 C2CD5Q86YS7 1000 aa18.33■□□□□ 0.52
PDCD5-201ENST00000221784 TTLL6Q8N841 843 aa18.33■□□□□ 0.52
PDCD5-201ENST00000221784 CAMTA2O94983 1202 aa18.32■□□□□ 0.52
PDCD5-201ENST00000221784 PIP4K2AP48426 406 aaPredicted RBP18.32■□□□□ 0.52
PDCD5-201ENST00000221784 SETDB2Q96T68 719 aa18.32■□□□□ 0.52
PDCD5-201ENST00000221784 PNNQ9H307 717 aaKnown RBP18.32■□□□□ 0.52
PDCD5-201ENST00000221784 VIRMAQ69YN4 1812 aaKnown RBP18.31■□□□□ 0.52
PDCD5-201ENST00000221784 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
PDCD5-201ENST00000221784 BRIP1Q9BX63 1249 aa18.31■□□□□ 0.52
PDCD5-201ENST00000221784 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
PDCD5-201ENST00000221784 RNF181Q9P0P0 153 aa18.31■□□□□ 0.52
PDCD5-201ENST00000221784 PDZRN3Q9UPQ7 1066 aa18.31■□□□□ 0.52
PDCD5-201ENST00000221784 PDE6BP35913 854 aa18.3■□□□□ 0.52
PDCD5-201ENST00000221784 PRR5LQ6MZQ0 368 aa18.3■□□□□ 0.52
PDCD5-201ENST00000221784 PNISRQ8TF01 805 aaKnown RBP18.3■□□□□ 0.52
PDCD5-201ENST00000221784 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
PDCD5-201ENST00000221784 NPHP1O15259 732 aa18.29■□□□□ 0.52
PDCD5-201ENST00000221784 RALBP1Q15311 655 aa18.29■□□□□ 0.52
PDCD5-201ENST00000221784 NFE2L2Q16236 605 aa18.29■□□□□ 0.52
PDCD5-201ENST00000221784 CLEC4GQ6UXB4 293 aa18.29■□□□□ 0.52
PDCD5-201ENST00000221784 CCDC24Q8N4L8 307 aa18.29■□□□□ 0.52
PDCD5-201ENST00000221784 SIPA1L3O60292 1781 aaPredicted RBP18.29■□□□□ 0.52
PDCD5-201ENST00000221784 HSPA6P17066 643 aa18.28■□□□□ 0.52
PDCD5-201ENST00000221784 ZNF622Q969S3 477 aaKnown RBP eCLIP18.28■□□□□ 0.522e-6■□□□□ 8.5
PDCD5-201ENST00000221784 NMRK2Q9NPI5 230 aa18.28■□□□□ 0.52
PDCD5-201ENST00000221784 MAPK8IP3Q9UPT6 1336 aa18.27■□□□□ 0.52
PDCD5-201ENST00000221784 NBPF26B4DH59 902 aa18.27■□□□□ 0.52
PDCD5-201ENST00000221784 TOMM70O94826 608 aa18.27■□□□□ 0.52
PDCD5-201ENST00000221784 NBPF10Q6P3W6 841 aaKnown RBP18.27■□□□□ 0.52
PDCD5-201ENST00000221784 NBPF15Q8N660 670 aa18.27■□□□□ 0.52
PDCD5-201ENST00000221784 CNBD1Q8NA66 436 aa18.27■□□□□ 0.52
PDCD5-201ENST00000221784 ZNF652Q9Y2D9 606 aa18.27■□□□□ 0.52
PDCD5-201ENST00000221784 RASSF7Q02833 373 aa18.26■□□□□ 0.51
PDCD5-201ENST00000221784 DDX10Q13206 875 aaKnown RBP18.26■□□□□ 0.51
PDCD5-201ENST00000221784 BRCA1P38398 1863 aaKnown RBP18.26■□□□□ 0.51
PDCD5-201ENST00000221784 NRXN2Q9P2S2 1712 aa18.26■□□□□ 0.51
PDCD5-201ENST00000221784 KDM2BQ8NHM5 1336 aa18.25■□□□□ 0.51
PDCD5-201ENST00000221784 ST5P78524 1137 aa18.25■□□□□ 0.51
PDCD5-201ENST00000221784 THUMPD2Q9BTF0 503 aaKnown RBP18.25■□□□□ 0.51
PDCD5-201ENST00000221784 RGL2O15211 777 aa18.24■□□□□ 0.51
PDCD5-201ENST00000221784 LMNB1P20700 586 aa18.24■□□□□ 0.51
PDCD5-201ENST00000221784 NBPF5PQ86XG9 351 aaPredicted RBP18.24■□□□□ 0.51
PDCD5-201ENST00000221784 AFDNP55196 1824 aaKnown RBP18.23■□□□□ 0.51
PDCD5-201ENST00000221784 ARFGEF1Q9Y6D6 1849 aa18.23■□□□□ 0.51
PDCD5-201ENST00000221784 EIF4A1P60842 406 aaKnown RBP18.23■□□□□ 0.51
PDCD5-201ENST00000221784 C16orf71Q8IYS4 520 aaPredicted RBP18.23■□□□□ 0.51
PDCD5-201ENST00000221784 C21orf2O43822 256 aa18.22■□□□□ 0.51
PDCD5-201ENST00000221784 SRGNP10124 158 aa18.22■□□□□ 0.51
PDCD5-201ENST00000221784 STYK1Q6J9G0 422 aa18.22■□□□□ 0.51
PDCD5-201ENST00000221784 TPTE2Q6XPS3 522 aa18.22■□□□□ 0.51
PDCD5-201ENST00000221784 CNKSR1Q969H4 720 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms