RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 PTPRCP08575 1304 aa19.42■□□□□ 0.7
SF3A2-201ENST00000221494 RBSNQ9H1K0 784 aa19.41■□□□□ 0.7
SF3A2-201ENST00000221494 OSBPL3Q9H4L5 887 aa19.41■□□□□ 0.7
SF3A2-201ENST00000221494 RGS12O14924 1447 aa19.41■□□□□ 0.7
SF3A2-201ENST00000221494 CPDO75976 1380 aa19.41■□□□□ 0.7
SF3A2-201ENST00000221494 ERBB3P21860 1342 aa19.4■□□□□ 0.7
SF3A2-201ENST00000221494 ERC2O15083 957 aa19.4■□□□□ 0.7
SF3A2-201ENST00000221494 IL17RAQ96F46 866 aa19.39■□□□□ 0.7
SF3A2-201ENST00000221494 NCAPD2Q15021 1401 aa19.39■□□□□ 0.69
SF3A2-201ENST00000221494 DYNC1I1O14576 645 aa19.39■□□□□ 0.69
SF3A2-201ENST00000221494 MCM10Q7L590 875 aa19.39■□□□□ 0.69
SF3A2-201ENST00000221494 EPB41L2O43491 1005 aaKnown RBP19.38■□□□□ 0.69
SF3A2-201ENST00000221494 SDSP20132 328 aa19.38■□□□□ 0.69
SF3A2-201ENST00000221494 SYAP1Q96A49 352 aaPredicted RBP19.38■□□□□ 0.69
SF3A2-201ENST00000221494 HMMRO75330 724 aa19.37■□□□□ 0.69
SF3A2-201ENST00000221494 PRIM1P49642 420 aaKnown RBP19.37■□□□□ 0.69
SF3A2-201ENST00000221494 CHRNA2Q15822 529 aa19.37■□□□□ 0.69
SF3A2-201ENST00000221494 CEP85Q6P2H3 762 aa19.37■□□□□ 0.69
SF3A2-201ENST00000221494 C8orf58Q8NAV2 365 aa19.37■□□□□ 0.69
SF3A2-201ENST00000221494 INTS4Q96HW7 963 aaKnown RBP19.37■□□□□ 0.69
SF3A2-201ENST00000221494 NHSL1Q5SYE7 1610 aa19.37■□□□□ 0.69
SF3A2-201ENST00000221494 NCLP19338 710 aaKnown RBP19.37■□□□□ 0.69
SF3A2-201ENST00000221494 ANAPC15P60006 121 aa19.37■□□□□ 0.69
SF3A2-201ENST00000221494 GPT2Q8TD30 523 aa19.37■□□□□ 0.69
SF3A2-201ENST00000221494 CRYBG1Q9Y4K1 1723 aa19.36■□□□□ 0.69
SF3A2-201ENST00000221494 HTATSF1O43719 755 aaKnown RBP19.36■□□□□ 0.69
SF3A2-201ENST00000221494 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.36■□□□□ 0.69
SF3A2-201ENST00000221494 PRPF40AO75400 957 aaKnown RBP19.35■□□□□ 0.69
SF3A2-201ENST00000221494 CUL4AQ13619 759 aa19.35■□□□□ 0.69
SF3A2-201ENST00000221494 ZDHHC9Q9Y397 364 aa19.35■□□□□ 0.69
SF3A2-201ENST00000221494 PHF14O94880 888 aa19.35■□□□□ 0.69
SF3A2-201ENST00000221494 N4BP2Q86UW6 1770 aaPredicted RBP19.34■□□□□ 0.69
SF3A2-201ENST00000221494 RTF1Q92541 710 aaKnown RBP19.34■□□□□ 0.69
SF3A2-201ENST00000221494 CRB1P82279 1406 aa19.34■□□□□ 0.69
SF3A2-201ENST00000221494 GNAT3A8MTJ3 354 aa19.33■□□□□ 0.69
SF3A2-201ENST00000221494 CHL1O00533 1208 aa19.33■□□□□ 0.69
SF3A2-201ENST00000221494 SASS6Q6UVJ0 657 aa19.33■□□□□ 0.69
SF3A2-201ENST00000221494 ABCC6O95255 1503 aa19.33■□□□□ 0.69
SF3A2-201ENST00000221494 COL18A1P39060 1754 aa19.33■□□□□ 0.69
SF3A2-201ENST00000221494 BRD1O95696 1058 aa19.33■□□□□ 0.68
SF3A2-201ENST00000221494 MCCP23508 829 aa19.33■□□□□ 0.68
SF3A2-201ENST00000221494 A0A0U1RQG5 324 aaPredicted RBP19.32■□□□□ 0.68
SF3A2-201ENST00000221494 RBM10P98175 930 aaKnown RBP19.32■□□□□ 0.68
SF3A2-201ENST00000221494 UVSSAQ2YD98 709 aa19.32■□□□□ 0.68
SF3A2-201ENST00000221494 FAM184AQ8NB25 1140 aa19.32■□□□□ 0.68
SF3A2-201ENST00000221494 TMEM63CQ9P1W3 806 aa19.32■□□□□ 0.68
SF3A2-201ENST00000221494 PRDM11Q9NQV5 511 aa19.32■□□□□ 0.68
SF3A2-201ENST00000221494 R3HCC1Q9Y3T6 440 aaKnown RBP19.32■□□□□ 0.68
SF3A2-201ENST00000221494 MAP3K5Q99683 1374 aa19.31■□□□□ 0.68
SF3A2-201ENST00000221494 PKP1Q13835 747 aa19.31■□□□□ 0.68
SF3A2-201ENST00000221494 ZGPATQ8N5A5 531 aaKnown RBP19.31■□□□□ 0.68
SF3A2-201ENST00000221494 IL17REQ8NFR9 667 aa19.31■□□□□ 0.68
SF3A2-201ENST00000221494 NLRP2Q9NX02 1062 aa19.31■□□□□ 0.68
SF3A2-201ENST00000221494 PLEKHO1Q53GL0 409 aaPredicted RBP19.3■□□□□ 0.68
SF3A2-201ENST00000221494 ROBO1Q9Y6N7 1651 aa19.3■□□□□ 0.68
SF3A2-201ENST00000221494 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
SF3A2-201ENST00000221494 UQCRHLA0A096LP55 91 aa19.3■□□□□ 0.68
SF3A2-201ENST00000221494 UQCRHP07919 91 aa19.3■□□□□ 0.68
SF3A2-201ENST00000221494 AMOTQ4VCS5 1084 aa19.3■□□□□ 0.68
SF3A2-201ENST00000221494 CACNA1FO60840 1977 aa19.3■□□□□ 0.68
SF3A2-201ENST00000221494 AHDC1Q5TGY3 1603 aaPredicted RBP19.29■□□□□ 0.68
SF3A2-201ENST00000221494 ELL2O00472 640 aaPredicted RBP19.29■□□□□ 0.68
SF3A2-201ENST00000221494 C16orf71Q8IYS4 520 aaPredicted RBP19.29■□□□□ 0.68
SF3A2-201ENST00000221494 TSPY26PQ9H489 355 aa19.29■□□□□ 0.68
SF3A2-201ENST00000221494 LMO7Q8WWI1 1683 aa19.29■□□□□ 0.68
SF3A2-201ENST00000221494 CSB-PGBD3P0DP91 1061 aa19.28■□□□□ 0.68
SF3A2-201ENST00000221494 TMX3Q96JJ7 454 aa19.28■□□□□ 0.68
SF3A2-201ENST00000221494 RGPD2P0DJD1 1756 aa19.28■□□□□ 0.68
SF3A2-201ENST00000221494 SYCE3A1L190 88 aa19.27■□□□□ 0.68
SF3A2-201ENST00000221494 TOM1O60784 492 aa19.27■□□□□ 0.68
SF3A2-201ENST00000221494 CCT4P50991 539 aaKnown RBP19.27■□□□□ 0.68
SF3A2-201ENST00000221494 PDE1AP54750 535 aa19.27■□□□□ 0.68
SF3A2-201ENST00000221494 AOX1Q06278 1338 aa19.27■□□□□ 0.68
SF3A2-201ENST00000221494 KIAA2012Q0VF49 1180 aa19.26■□□□□ 0.67
SF3A2-201ENST00000221494 ZNF530Q6P9A1 599 aaPredicted RBP19.26■□□□□ 0.67
SF3A2-201ENST00000221494 RBM27Q9P2N5 1060 aaKnown RBP19.26■□□□□ 0.67
SF3A2-201ENST00000221494 RGPD5Q99666 1765 aa19.26■□□□□ 0.67
SF3A2-201ENST00000221494 SALL3Q9BXA9 1300 aa19.26■□□□□ 0.67
SF3A2-201ENST00000221494 AKAP4Q5JQC9 854 aa19.26■□□□□ 0.67
SF3A2-201ENST00000221494 TMEM87AQ8NBN3 555 aa19.26■□□□□ 0.67
SF3A2-201ENST00000221494 OTUD7AQ8TE49 926 aaPredicted RBP19.26■□□□□ 0.67
SF3A2-201ENST00000221494 MIS18AQ9NYP9 233 aa19.26■□□□□ 0.67
SF3A2-201ENST00000221494 CEMIPQ8WUJ3 1361 aa19.25■□□□□ 0.67
SF3A2-201ENST00000221494 LETM1O95202 739 aaPredicted RBP19.25■□□□□ 0.67
SF3A2-201ENST00000221494 PRIMPOLQ96LW4 560 aa19.25■□□□□ 0.67
SF3A2-201ENST00000221494 ESYT1Q9BSJ8 1104 aa19.25■□□□□ 0.67
SF3A2-201ENST00000221494 SRCIN1Q9C0H9 1055 aa19.25■□□□□ 0.67
SF3A2-201ENST00000221494 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
SF3A2-201ENST00000221494 NEK4P51957 841 aa19.24■□□□□ 0.67
SF3A2-201ENST00000221494 SMAP1Q8IYB5 467 aaPredicted RBP19.24■□□□□ 0.67
SF3A2-201ENST00000221494 RAPGEF4Q8WZA2 1011 aa19.24■□□□□ 0.67
SF3A2-201ENST00000221494 LGR6Q9HBX8 967 aa19.24■□□□□ 0.67
SF3A2-201ENST00000221494 WDR33Q9C0J8 1336 aaKnown RBP19.23■□□□□ 0.67
SF3A2-201ENST00000221494 BRD2P25440 801 aaKnown RBP19.23■□□□□ 0.67
SF3A2-201ENST00000221494 HMGN5P82970 282 aaKnown RBP19.23■□□□□ 0.67
SF3A2-201ENST00000221494 KRT24Q2M2I5 525 aa19.23■□□□□ 0.67
SF3A2-201ENST00000221494 TSPYL4Q9UJ04 414 aa19.23■□□□□ 0.67
SF3A2-201ENST00000221494 TAF7Q15545 349 aaPredicted RBP19.23■□□□□ 0.67
SF3A2-201ENST00000221494 ABCA3Q99758 1704 aa19.22■□□□□ 0.67
SF3A2-201ENST00000221494 COL5A2P05997 1499 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms