RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 RBM27Q9P2N5 1060 aaKnown RBP14.79□□□□□ -0.04
TM9SF4-201ENST00000217315 PA2G4Q9UQ80 394 aaKnown RBP14.79□□□□□ -0.04
TM9SF4-201ENST00000217315 RTL1A6NKG5 1358 aa14.79□□□□□ -0.04
TM9SF4-201ENST00000217315 FERMT3Q86UX7 667 aa14.78□□□□□ -0.04
TM9SF4-201ENST00000217315 IL17REQ8NFR9 667 aa14.78□□□□□ -0.04
TM9SF4-201ENST00000217315 IP6K1Q92551 441 aa14.78□□□□□ -0.04
TM9SF4-201ENST00000217315 KIAA0232Q92628 1395 aa14.78□□□□□ -0.04
TM9SF4-201ENST00000217315 CWF19L2Q2TBE0 894 aaKnown RBP14.78□□□□□ -0.04
TM9SF4-201ENST00000217315 AKAP4Q5JQC9 854 aa14.78□□□□□ -0.04
TM9SF4-201ENST00000217315 ALKQ9UM73 1620 aa14.78□□□□□ -0.04
TM9SF4-201ENST00000217315 PNPLA6Q8IY17 1366 aa14.77□□□□□ -0.04
TM9SF4-201ENST00000217315 PDCP20941 246 aa14.77□□□□□ -0.04
TM9SF4-201ENST00000217315 PIP4K2AP48426 406 aaPredicted RBP14.77□□□□□ -0.04
TM9SF4-201ENST00000217315 LRRFIP1Q32MZ4 808 aaKnown RBP14.77□□□□□ -0.04
TM9SF4-201ENST00000217315 CCDC85AQ96PX6 553 aaPredicted RBP14.77□□□□□ -0.04
TM9SF4-201ENST00000217315 ANTXR1Q9H6X2 564 aa14.77□□□□□ -0.04
TM9SF4-201ENST00000217315 CHMLP26374 656 aa14.77□□□□□ -0.04
TM9SF4-201ENST00000217315 NRXN1Q9ULB1 1477 aa14.77□□□□□ -0.05
TM9SF4-201ENST00000217315 SOS1Q07889 1333 aaPredicted RBP14.77□□□□□ -0.05
TM9SF4-201ENST00000217315 ATP5J2-PTCD1G3V325 749 aa14.77□□□□□ -0.05
TM9SF4-201ENST00000217315 HSP90AA2PQ14568 343 aaPredicted RBP14.77□□□□□ -0.05
TM9SF4-201ENST00000217315 CPLX1O14810 134 aa14.76□□□□□ -0.05
TM9SF4-201ENST00000217315 NBPF6Q5VWK0 638 aa14.76□□□□□ -0.05
TM9SF4-201ENST00000217315 NBPF4Q96M43 638 aa14.76□□□□□ -0.05
TM9SF4-201ENST00000217315 ORAI2Q96SN7 254 aa14.76□□□□□ -0.05
TM9SF4-201ENST00000217315 NRDCO43847 1150 aa14.76□□□□□ -0.05
TM9SF4-201ENST00000217315 ADGRB1O14514 1584 aa14.76□□□□□ -0.05
TM9SF4-201ENST00000217315 CEBPZQ03701 1054 aaKnown RBP14.76□□□□□ -0.05
TM9SF4-201ENST00000217315 LIMCH1Q9UPQ0 1083 aa14.76□□□□□ -0.05
TM9SF4-201ENST00000217315 KIAA1210Q9ULL0 1709 aa14.76□□□□□ -0.05
TM9SF4-201ENST00000217315 CD2BP2O95400 341 aaKnown RBP14.76□□□□□ -0.05
TM9SF4-201ENST00000217315 NBPF7P0C2Y1 421 aaPredicted RBP14.75□□□□□ -0.05
TM9SF4-201ENST00000217315 UBE3BQ7Z3V4 1068 aa14.75□□□□□ -0.05
TM9SF4-201ENST00000217315 NEXMIFQ5QGS0 1516 aa14.75□□□□□ -0.05
TM9SF4-201ENST00000217315 A0A087WZG4 1122 aa14.75□□□□□ -0.05
TM9SF4-201ENST00000217315 BECN2A8MW95 431 aa14.75□□□□□ -0.05
TM9SF4-201ENST00000217315 GOLGA6L19H0YKK7 550 aa14.75□□□□□ -0.05
TM9SF4-201ENST00000217315 R3HCC1Q9Y3T6 440 aaKnown RBP14.75□□□□□ -0.05
TM9SF4-201ENST00000217315 KSR2Q6VAB6 950 aa14.75□□□□□ -0.05
TM9SF4-201ENST00000217315 PTPRMP28827 1452 aa14.75□□□□□ -0.05
TM9SF4-201ENST00000217315 VWDEQ8N2E2 1590 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 FBXW7Q969H0 707 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 CDK12Q9NYV4 1490 aaPredicted RBP14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 ARHGEF10O15013 1369 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 FAM177BA6PVY3 158 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 GTF2E1P29083 439 aaPredicted RBP14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 COPS6Q7L5N1 327 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 CABLES1Q8TDN4 633 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 CAMSAP1Q5T5Y3 1602 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 USP6P35125 1406 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 GRM8O00222 908 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 XAGE3Q8WTP9 111 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 ZSCAN31Q96LW9 406 aaPredicted RBP14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 USP44Q9H0E7 712 aa14.74□□□□□ -0.05
TM9SF4-201ENST00000217315 FKBP4Q02790 459 aaKnown RBP eCLIP14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 DIP2CQ9Y2E4 1556 aa14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 TRDNQ13061 729 aa14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 RALYLQ86SE5 291 aaKnown RBP14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 TCEANC2Q96MN5 208 aa14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 CCDC39Q9UFE4 941 aa14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 KCNQ3O43525 872 aa14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 KRT85P78386 507 aa14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 ANKRD1Q15327 319 aa14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 EVI5LQ96CN4 794 aa14.73□□□□□ -0.05
TM9SF4-201ENST00000217315 ANAPC15P60006 121 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 ZSCAN23Q3MJ62 389 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 SASS6Q6UVJ0 657 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 IFNL2Q8IZJ0 200 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 NFATC2IPQ8NCF5 419 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 ARHGEF40Q8TER5 1519 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 ANKRD13DQ6ZTN6 518 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 DDX11Q96FC9 970 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 FAM13BQ9NYF5 915 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 DEPDC5O75140 1603 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 KIF24Q5T7B8 1368 aa14.72□□□□□ -0.05
TM9SF4-201ENST00000217315 LRRC7Q96NW7 1537 aa14.71□□□□□ -0.05
TM9SF4-201ENST00000217315 RNMTO43148 476 aaKnown RBP14.71□□□□□ -0.05
TM9SF4-201ENST00000217315 LINS1Q8NG48 757 aa14.71□□□□□ -0.05
TM9SF4-201ENST00000217315 FMNL2Q96PY5 1086 aa14.71□□□□□ -0.05
TM9SF4-201ENST00000217315 CEP126Q9P2H0 1117 aa14.71□□□□□ -0.05
TM9SF4-201ENST00000217315 IQSEC2Q5JU85 1478 aa14.71□□□□□ -0.05
TM9SF4-201ENST00000217315 MROH2AA6NES4 1674 aa14.71□□□□□ -0.05
TM9SF4-201ENST00000217315 ALDH1L1O75891 902 aa14.71□□□□□ -0.05
TM9SF4-201ENST00000217315 CCDC57Q2TAC2 916 aa14.71□□□□□ -0.05
TM9SF4-201ENST00000217315 CPLX2Q6PUV4 134 aaKnown RBP14.71□□□□□ -0.05
TM9SF4-201ENST00000217315 ZSCAN30Q86W11 494 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 CHMP4CQ96CF2 233 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 ZBTB3Q9H5J0 574 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 KDM4AO75164 1064 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 CCDC73Q6ZRK6 1079 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 IGSF1Q8N6C5 1336 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 PLEKHG1Q9ULL1 1385 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 STX6O43752 255 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 CPA1P15085 419 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 NECAB1Q8N987 351 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 PTCH1Q13635 1447 aa14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 LETM1O95202 739 aaPredicted RBP14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 EIF4A1P60842 406 aaKnown RBP14.7□□□□□ -0.06
TM9SF4-201ENST00000217315 DTNBO60941 627 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms