RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 TERF1P54274 439 aa16.83■□□□□ 0.29
SPTLC2-201ENST00000216484 DDX12PQ92771 950 aa16.83■□□□□ 0.29
SPTLC2-201ENST00000216484 SEPT14Q6ZU15 432 aa16.83■□□□□ 0.29
SPTLC2-201ENST00000216484 GBP7Q8N8V2 638 aaPredicted RBP16.83■□□□□ 0.29
SPTLC2-201ENST00000216484 ABTB2Q8N961 1025 aa16.83■□□□□ 0.29
SPTLC2-201ENST00000216484 TMEM266Q2M3C6 531 aa16.83■□□□□ 0.28
SPTLC2-201ENST00000216484 CNTLNQ9NXG0 1405 aa16.83■□□□□ 0.28
SPTLC2-201ENST00000216484 ZFYP08048 801 aaPredicted RBP16.83■□□□□ 0.28
SPTLC2-201ENST00000216484 SRCIN1Q9C0H9 1055 aa16.83■□□□□ 0.28
SPTLC2-201ENST00000216484 ZSWIM4Q9H7M6 989 aa16.83■□□□□ 0.28
SPTLC2-201ENST00000216484 ERCC3P19447 782 aa16.83■□□□□ 0.28
SPTLC2-201ENST00000216484 KRT32Q14532 448 aa16.83■□□□□ 0.28
SPTLC2-201ENST00000216484 MKNK2Q9HBH9 465 aa16.83■□□□□ 0.28
SPTLC2-201ENST00000216484 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
SPTLC2-201ENST00000216484 MINDY4BA8MYZ0 360 aa16.82■□□□□ 0.28
SPTLC2-201ENST00000216484 MYO1BO43795 1136 aa16.82■□□□□ 0.28
SPTLC2-201ENST00000216484 MMRN2Q9H8L6 949 aa16.82■□□□□ 0.28
SPTLC2-201ENST00000216484 ABCF2Q9UG63 623 aa16.82■□□□□ 0.28
SPTLC2-201ENST00000216484 DYNC1I1O14576 645 aa16.82■□□□□ 0.28
SPTLC2-201ENST00000216484 IDH1O75874 414 aaKnown RBP16.82■□□□□ 0.28
SPTLC2-201ENST00000216484 CNNM3Q8NE01 707 aa16.82■□□□□ 0.28
SPTLC2-201ENST00000216484 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
SPTLC2-201ENST00000216484 CUL5Q93034 780 aa16.81■□□□□ 0.28
SPTLC2-201ENST00000216484 GMNNO75496 209 aa16.81■□□□□ 0.28
SPTLC2-201ENST00000216484 FLIIQ13045 1269 aa16.81■□□□□ 0.28
SPTLC2-201ENST00000216484 LRSAM1Q6UWE0 723 aa16.81■□□□□ 0.28
SPTLC2-201ENST00000216484 XPCQ01831 940 aaPredicted RBP16.81■□□□□ 0.28
SPTLC2-201ENST00000216484 IRX3P78415 501 aaPredicted RBP16.81■□□□□ 0.28
SPTLC2-201ENST00000216484 CRACR2BQ8N4Y2 399 aaPredicted RBP16.81■□□□□ 0.28
SPTLC2-201ENST00000216484 SNW1Q13573 536 aaKnown RBP16.8■□□□□ 0.28
SPTLC2-201ENST00000216484 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
SPTLC2-201ENST00000216484 POLR3DP05423 398 aaPredicted RBP16.8■□□□□ 0.28
SPTLC2-201ENST00000216484 CABP4P57796 275 aa16.8■□□□□ 0.28
SPTLC2-201ENST00000216484 SARNPP82979 210 aaKnown RBP16.8■□□□□ 0.28
SPTLC2-201ENST00000216484 RSPH14Q9UHP6 348 aa16.8■□□□□ 0.28
SPTLC2-201ENST00000216484 MAP3K9P80192 1104 aa16.8■□□□□ 0.28
SPTLC2-201ENST00000216484 TMC6Q7Z403 805 aa16.8■□□□□ 0.28
SPTLC2-201ENST00000216484 CCT4P50991 539 aaKnown RBP16.8■□□□□ 0.28
SPTLC2-201ENST00000216484 TMOD2Q9NZR1 351 aa16.8■□□□□ 0.28
SPTLC2-201ENST00000216484 PDE1CQ14123 709 aaPredicted RBP16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 IFI16Q16666 785 aaKnown RBP16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 GAS2L2Q8NHY3 880 aa16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 GUCY1B3Q02153 619 aa16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 GSTA5Q7RTV2 222 aa16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 MICALL1Q8N3F8 863 aa16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 ZSCAN31Q96LW9 406 aaPredicted RBP16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 IVLP07476 585 aa16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 SNX16P57768 344 aa16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 TBC1D5Q92609 795 aa16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 WDHD1O75717 1129 aaPredicted RBP16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 HDGFL1Q5TGJ6 251 aa16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 ATRIPQ8WXE1 791 aa16.79■□□□□ 0.28
SPTLC2-201ENST00000216484 KIF5AQ12840 1032 aa16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 PLVAPQ9BX97 442 aa16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 ARID4AP29374 1257 aaPredicted RBP16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 PAXIP1Q6ZW49 1069 aaPredicted RBP16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 SAMM50Q9Y512 469 aa16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 BCAR3O75815 825 aa16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 PDIA4P13667 645 aaKnown RBP16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 MCM6Q14566 821 aa16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 PLEKHO1Q53GL0 409 aaPredicted RBP16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 SETD1BQ9UPS6 1966 aaKnown RBP16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 RAD54L2Q9Y4B4 1467 aa16.78■□□□□ 0.28
SPTLC2-201ENST00000216484 RFC1P35251 1148 aaPredicted RBP16.77■□□□□ 0.28
SPTLC2-201ENST00000216484 ISM2Q6H9L7 571 aa16.77■□□□□ 0.28
SPTLC2-201ENST00000216484 C8orf76Q96K31 380 aa16.77■□□□□ 0.28
SPTLC2-201ENST00000216484 CCDC174Q6PII3 467 aa16.77■□□□□ 0.28
SPTLC2-201ENST00000216484 KIF5BP33176 963 aa16.77■□□□□ 0.28
SPTLC2-201ENST00000216484 MCM4P33991 863 aa16.77■□□□□ 0.28
SPTLC2-201ENST00000216484 BICD1Q96G01 975 aa16.77■□□□□ 0.28
SPTLC2-201ENST00000216484 SELENOOQ9BVL4 669 aa16.77■□□□□ 0.28
SPTLC2-201ENST00000216484 STIM2Q9P246 746 aa16.77■□□□□ 0.27
SPTLC2-201ENST00000216484 RASAL2Q9UJF2 1139 aa16.77■□□□□ 0.27
SPTLC2-201ENST00000216484 NLRP6P59044 892 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 CCDC40Q4G0X9 1142 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 WHAMMQ8TF30 809 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 GSDMDP57764 484 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 CCDC170Q8IYT3 715 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 PHAXQ9H814 394 aaKnown RBP16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 TTC12Q9H892 705 aaPredicted RBP16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 RNF216Q9NWF9 866 aaPredicted RBP16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 KRT13P13646 458 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 TTC31Q49AM3 519 aaPredicted RBP16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 FERMT3Q86UX7 667 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 CHD1LQ86WJ1 897 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 PFDN4Q9NQP4 134 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 CCDC121Q6ZUS5 278 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 GGNBP2Q9H3C7 697 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 TXNDC16Q9P2K2 825 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 A0A087WZG4 1122 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 CFAP157Q5JU67 520 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 CKAP2LQ8IYA6 745 aa16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 CCDC12Q8WUD4 166 aaPredicted RBP16.76■□□□□ 0.27
SPTLC2-201ENST00000216484 CALML4Q96GE6 196 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms