RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 PDIA6Q15084 440 aa14.03□□□□□ -0.16
GPATCH1-201ENST00000170564 ZNF790Q6PG37 636 aa14.03□□□□□ -0.16
GPATCH1-201ENST00000170564 SPG7Q9UQ90 795 aa14.03□□□□□ -0.16
GPATCH1-201ENST00000170564 PLEKHG2Q9H7P9 1386 aa14.02□□□□□ -0.16
GPATCH1-201ENST00000170564 IFNL2Q8IZJ0 200 aa14.02□□□□□ -0.16
GPATCH1-201ENST00000170564 DCTPP1Q9H773 170 aa14.02□□□□□ -0.16
GPATCH1-201ENST00000170564 CCT4P50991 539 aaKnown RBP14.02□□□□□ -0.17
GPATCH1-201ENST00000170564 ANKRD45Q5TZF3 282 aa14.02□□□□□ -0.17
GPATCH1-201ENST00000170564 USP44Q9H0E7 712 aa14.02□□□□□ -0.17
GPATCH1-201ENST00000170564 TOM1L2Q6ZVM7 507 aa14.02□□□□□ -0.17
GPATCH1-201ENST00000170564 GCC1Q96CN9 775 aa14.02□□□□□ -0.17
GPATCH1-201ENST00000170564 TBC1D2Q9BYX2 928 aa14.01□□□□□ -0.17
GPATCH1-201ENST00000170564 UBR2Q8IWV8 1755 aa14.01□□□□□ -0.17
GPATCH1-201ENST00000170564 CHMP4BQ9H444 224 aaKnown RBP14.01□□□□□ -0.17
GPATCH1-201ENST00000170564 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
GPATCH1-201ENST00000170564 STRN4Q9NRL3 753 aa14□□□□□ -0.17
GPATCH1-201ENST00000170564 PAPPAQ13219 1627 aa14□□□□□ -0.17
GPATCH1-201ENST00000170564 C16orf71Q8IYS4 520 aaPredicted RBP14□□□□□ -0.17
GPATCH1-201ENST00000170564 DCAF5Q96JK2 942 aa14□□□□□ -0.17
GPATCH1-201ENST00000170564 PI4KAP2A4QPH2 592 aa14□□□□□ -0.17
GPATCH1-201ENST00000170564 PI4KAP1Q8N8J0 262 aa14□□□□□ -0.17
GPATCH1-201ENST00000170564 PNMA6EA0A0J9YXQ4 647 aa13.99□□□□□ -0.17
GPATCH1-201ENST00000170564 LRP10Q7Z4F1 713 aa13.99□□□□□ -0.17
GPATCH1-201ENST00000170564 OTUD7AQ8TE49 926 aaPredicted RBP13.99□□□□□ -0.17
GPATCH1-201ENST00000170564 CARD10Q9BWT7 1032 aa13.99□□□□□ -0.17
GPATCH1-201ENST00000170564 BEND3Q5T5X7 828 aa13.99□□□□□ -0.17
GPATCH1-201ENST00000170564 TRIM44Q96DX7 344 aaPredicted RBP13.99□□□□□ -0.17
GPATCH1-201ENST00000170564 RPAP2Q8IXW5 612 aaPredicted RBP13.99□□□□□ -0.17
GPATCH1-201ENST00000170564 TRAK2O60296 914 aa13.98□□□□□ -0.17
GPATCH1-201ENST00000170564 MCM4P33991 863 aa13.98□□□□□ -0.17
GPATCH1-201ENST00000170564 COL14A1Q05707 1796 aaKnown RBP13.98□□□□□ -0.17
GPATCH1-201ENST00000170564 NBPF7P0C2Y1 421 aaPredicted RBP13.98□□□□□ -0.17
GPATCH1-201ENST00000170564 BTG4Q9NY30 223 aa13.98□□□□□ -0.17
GPATCH1-201ENST00000170564 DBF4Q9UBU7 674 aaPredicted RBP13.98□□□□□ -0.17
GPATCH1-201ENST00000170564 SMARCA5O60264 1052 aaPredicted RBP13.97□□□□□ -0.17
GPATCH1-201ENST00000170564 ZCRB1Q8TBF4 217 aaKnown RBP13.97□□□□□ -0.17
GPATCH1-201ENST00000170564 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
GPATCH1-201ENST00000170564 KCPQ6ZWJ8 1503 aa13.97□□□□□ -0.17
GPATCH1-201ENST00000170564 PIP4K2AP48426 406 aaPredicted RBP13.97□□□□□ -0.17
GPATCH1-201ENST00000170564 USP16Q9Y5T5 823 aa13.97□□□□□ -0.17
GPATCH1-201ENST00000170564 LRRFIP2Q9Y608 721 aaKnown RBP13.97□□□□□ -0.17
GPATCH1-201ENST00000170564 PHLPP1O60346 1717 aa13.96□□□□□ -0.17
GPATCH1-201ENST00000170564 LAMB4A4D0S4 1761 aa13.96□□□□□ -0.17
GPATCH1-201ENST00000170564 ZMYND15Q9H091 742 aa13.96□□□□□ -0.17
GPATCH1-201ENST00000170564 PLCH1Q4KWH8 1693 aa13.96□□□□□ -0.17
GPATCH1-201ENST00000170564 TUBGCP6Q96RT7 1819 aa13.96□□□□□ -0.18
GPATCH1-201ENST00000170564 GNAI2P04899 355 aa13.96□□□□□ -0.18
GPATCH1-201ENST00000170564 IL2RBP14784 551 aa13.96□□□□□ -0.18
GPATCH1-201ENST00000170564 GSPT1P15170 499 aaKnown RBP13.96□□□□□ -0.18
GPATCH1-201ENST00000170564 PLEKHM2Q8IWE5 1019 aa13.96□□□□□ -0.18
GPATCH1-201ENST00000170564 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.18
GPATCH1-201ENST00000170564 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.18
GPATCH1-201ENST00000170564 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
GPATCH1-201ENST00000170564 DNAAF4Q8WXU2 420 aa13.95□□□□□ -0.18
GPATCH1-201ENST00000170564 WNK3Q9BYP7 1800 aa13.95□□□□□ -0.18
GPATCH1-201ENST00000170564 DISP2A7MBM2 1401 aa13.95□□□□□ -0.18
GPATCH1-201ENST00000170564 MAP3K2Q9Y2U5 619 aa13.95□□□□□ -0.18
GPATCH1-201ENST00000170564 APBB1O00213 710 aa13.94□□□□□ -0.18
GPATCH1-201ENST00000170564 DDX21Q9NR30 783 aaKnown RBP eCLIP13.94□□□□□ -0.18
GPATCH1-201ENST00000170564 NRAPQ86VF7 1730 aa13.94□□□□□ -0.18
GPATCH1-201ENST00000170564 CWF19L2Q2TBE0 894 aaKnown RBP13.94□□□□□ -0.18
GPATCH1-201ENST00000170564 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
GPATCH1-201ENST00000170564 EXOC6BQ9Y2D4 811 aa13.94□□□□□ -0.18
GPATCH1-201ENST00000170564 ITGB4P16144 1822 aa13.93□□□□□ -0.18
GPATCH1-201ENST00000170564 CABP4P57796 275 aa13.93□□□□□ -0.18
GPATCH1-201ENST00000170564 BMP2KLQ5H9B9 411 aa13.93□□□□□ -0.18
GPATCH1-201ENST00000170564 HSCBQ8IWL3 235 aa13.93□□□□□ -0.18
GPATCH1-201ENST00000170564 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
GPATCH1-201ENST00000170564 EP400Q96L91 3159 aa13.93□□□□□ -0.18
GPATCH1-201ENST00000170564 TBC1D32Q96NH3 1257 aa13.93□□□□□ -0.18
GPATCH1-201ENST00000170564 GNAI3P08754 354 aa13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 EVA1CP58658 441 aa13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 ATP8B2P98198 1209 aa13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 C22orf23Q9BZE7 217 aa13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 ANTXR1Q9H6X2 564 aa13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 CHMP5Q9NZZ3 219 aa13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 ARFGEF2Q9Y6D5 1785 aa13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 MYL6BP14649 208 aa13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 AIMP1Q12904 312 aaKnown RBP13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 KSR2Q6VAB6 950 aa13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 TNS2Q63HR2 1409 aa13.92□□□□□ -0.18
GPATCH1-201ENST00000170564 IGKV5-2P06315 115 aa13.91□□□□□ -0.18
GPATCH1-201ENST00000170564 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.91□□□□□ -0.18
GPATCH1-201ENST00000170564 SALL3Q9BXA9 1300 aa13.91□□□□□ -0.18
GPATCH1-201ENST00000170564 HSP90AB1P08238 724 aaKnown RBP13.91□□□□□ -0.18
GPATCH1-201ENST00000170564 KAZALD1Q96I82 304 aa13.91□□□□□ -0.18
GPATCH1-201ENST00000170564 HYPKQ9NX55 129 aa13.91□□□□□ -0.18
GPATCH1-201ENST00000170564 UBTFL1P0CB47 393 aaPredicted RBP13.91□□□□□ -0.18
GPATCH1-201ENST00000170564 NBPF26B4DH59 902 aa13.9□□□□□ -0.18
GPATCH1-201ENST00000170564 SNRPA1P09661 255 aaKnown RBP13.9□□□□□ -0.18
GPATCH1-201ENST00000170564 CLCN1P35523 988 aa13.9□□□□□ -0.18
GPATCH1-201ENST00000170564 NBPF14Q5TI25 921 aa13.9□□□□□ -0.18
GPATCH1-201ENST00000170564 NBPF10Q6P3W6 841 aaKnown RBP13.9□□□□□ -0.18
GPATCH1-201ENST00000170564 NBPF15Q8N660 670 aa13.9□□□□□ -0.18
GPATCH1-201ENST00000170564 IBTKQ9P2D0 1353 aaPredicted RBP13.9□□□□□ -0.18
GPATCH1-201ENST00000170564 MRE11P49959 708 aa13.9□□□□□ -0.18
GPATCH1-201ENST00000170564 ARID3AQ99856 593 aa13.9□□□□□ -0.18
GPATCH1-201ENST00000170564 GRPEL1Q9HAV7 217 aa13.9□□□□□ -0.18
GPATCH1-201ENST00000170564 ERVV-2B6SEH9 535 aa13.89□□□□□ -0.19
GPATCH1-201ENST00000170564 POLA2Q14181 598 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms