RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 TMCO3Q6UWJ1 677 aa14.6□□□□□ -0.07
LMCD1-201ENST00000157600 EHMT1Q9H9B1 1298 aa14.6□□□□□ -0.07
LMCD1-201ENST00000157600 FILIP1Q7Z7B0 1213 aa14.59□□□□□ -0.07
LMCD1-201ENST00000157600 ARHGAP45Q92619 1136 aa14.59□□□□□ -0.07
LMCD1-201ENST00000157600 STK3Q13188 491 aa14.59□□□□□ -0.07
LMCD1-201ENST00000157600 TUBB4AP04350 444 aa14.59□□□□□ -0.07
LMCD1-201ENST00000157600 C8orf76Q96K31 380 aa14.59□□□□□ -0.07
LMCD1-201ENST00000157600 CTCFLQ8NI51 663 aaPredicted RBP14.59□□□□□ -0.07
LMCD1-201ENST00000157600 NAPBQ9H115 298 aa14.59□□□□□ -0.07
LMCD1-201ENST00000157600 BICRAQ9NZM4 1560 aa14.59□□□□□ -0.07
LMCD1-201ENST00000157600 PIK3R4Q99570 1358 aa14.59□□□□□ -0.07
LMCD1-201ENST00000157600 DDX12PQ92771 950 aa14.59□□□□□ -0.07
LMCD1-201ENST00000157600 STRN4Q9NRL3 753 aa14.59□□□□□ -0.07
LMCD1-201ENST00000157600 ZSCAN16Q9H4T2 348 aaPredicted RBP14.58□□□□□ -0.07
LMCD1-201ENST00000157600 FAM114A1Q8IWE2 563 aa14.58□□□□□ -0.07
LMCD1-201ENST00000157600 BMP15O95972 392 aa14.58□□□□□ -0.08
LMCD1-201ENST00000157600 CETN1Q12798 172 aa14.58□□□□□ -0.08
LMCD1-201ENST00000157600 LRRC27Q9C0I9 530 aa14.58□□□□□ -0.08
LMCD1-201ENST00000157600 FANCAO15360 1455 aa14.58□□□□□ -0.08
LMCD1-201ENST00000157600 KIF5BP33176 963 aa14.58□□□□□ -0.08
LMCD1-201ENST00000157600 AMPD3Q01432 767 aa14.58□□□□□ -0.08
LMCD1-201ENST00000157600 TAOK3Q9H2K8 898 aa14.58□□□□□ -0.08
LMCD1-201ENST00000157600 CGNQ9P2M7 1197 aaKnown RBP14.58□□□□□ -0.08
LMCD1-201ENST00000157600 GTPBP4Q9BZE4 634 aaKnown RBP14.58□□□□□ -0.08
LMCD1-201ENST00000157600 USO1O60763 962 aaKnown RBP14.57□□□□□ -0.08
LMCD1-201ENST00000157600 IFIT5Q13325 482 aaKnown RBP14.57□□□□□ -0.08
LMCD1-201ENST00000157600 STX1AQ16623 288 aa14.57□□□□□ -0.08
LMCD1-201ENST00000157600 UVSSAQ2YD98 709 aa14.57□□□□□ -0.08
LMCD1-201ENST00000157600 NAA15Q9BXJ9 866 aaKnown RBP14.57□□□□□ -0.08
LMCD1-201ENST00000157600 METTL24Q5JXM2 366 aa14.57□□□□□ -0.08
LMCD1-201ENST00000157600 SSH1Q8WYL5 1049 aa14.57□□□□□ -0.08
LMCD1-201ENST00000157600 ATP2B2Q01814 1243 aa14.57□□□□□ -0.08
LMCD1-201ENST00000157600 SYCE3A1L190 88 aa14.57□□□□□ -0.08
LMCD1-201ENST00000157600 ZNF76P36508 570 aa14.57□□□□□ -0.08
LMCD1-201ENST00000157600 KDM5BQ9UGL1 1544 aa14.57□□□□□ -0.08
LMCD1-201ENST00000157600 LRRFIP2Q9Y608 721 aaKnown RBP14.57□□□□□ -0.08
LMCD1-201ENST00000157600 PPP4R3AQ6IN85 833 aa14.57□□□□□ -0.08
LMCD1-201ENST00000157600 RAI14Q9P0K7 980 aa14.57□□□□□ -0.08
LMCD1-201ENST00000157600 CCDC150Q8NCX0 1101 aa14.56□□□□□ -0.08
LMCD1-201ENST00000157600 SLC5A1P13866 664 aa14.56□□□□□ -0.08
LMCD1-201ENST00000157600 SF3B2Q13435 895 aaKnown RBP14.56□□□□□ -0.08
LMCD1-201ENST00000157600 ANAPC15P60006 121 aa14.56□□□□□ -0.08
LMCD1-201ENST00000157600 SHTN1A0MZ66 631 aa14.56□□□□□ -0.08
LMCD1-201ENST00000157600 UBE2HP62256 183 aa14.56□□□□□ -0.08
LMCD1-201ENST00000157600 TOP1P11387 765 aaKnown RBP14.55□□□□□ -0.08
LMCD1-201ENST00000157600 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
LMCD1-201ENST00000157600 SOS1Q07889 1333 aaPredicted RBP14.55□□□□□ -0.08
LMCD1-201ENST00000157600 TTC21AQ8NDW8 1320 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 MICALCLQ6ZW33 695 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 STXBP4Q6ZWJ1 553 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 PAF1Q8N7H5 531 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 TMOD3Q9NYL9 352 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 IDH1O75874 414 aaKnown RBP14.55□□□□□ -0.08
LMCD1-201ENST00000157600 TRAF1Q13077 416 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 CCDC178Q5BJE1 867 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 CATIPQ7Z7H3 387 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 ZHX3Q9H4I2 956 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 SLC12A7Q9Y666 1083 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 CASQ1P31415 396 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 RRS1Q15050 365 aaKnown RBP14.55□□□□□ -0.08
LMCD1-201ENST00000157600 MTMR7Q9Y216 660 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 GOLGA6L10A0A0M3HER8 536 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 HDAC1Q13547 482 aaPredicted RBP14.55□□□□□ -0.08
LMCD1-201ENST00000157600 ALS2CR12Q96Q35 445 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 BRPF3Q9ULD4 1205 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 PAXBP1Q9Y5B6 917 aa14.55□□□□□ -0.08
LMCD1-201ENST00000157600 KDM5AP29375 1690 aaKnown RBP14.54□□□□□ -0.08
LMCD1-201ENST00000157600 GCOM1H8Y6P7 765 aaPredicted RBP14.54□□□□□ -0.08
LMCD1-201ENST00000157600 MYZAPP0CAP1 466 aa14.54□□□□□ -0.08
LMCD1-201ENST00000157600 DNAAF4Q8WXU2 420 aa14.54□□□□□ -0.08
LMCD1-201ENST00000157600 DENND4BO75064 1496 aaPredicted RBP14.54□□□□□ -0.08
LMCD1-201ENST00000157600 GOLIM4O00461 696 aa14.54□□□□□ -0.08
LMCD1-201ENST00000157600 SHANK2Q9UPX8 1470 aa14.54□□□□□ -0.08
LMCD1-201ENST00000157600 TEX14Q8IWB6 1497 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 YEATS4O95619 227 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 PBRM1Q86U86 1689 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 PLB1Q6P1J6 1458 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 CCDC172P0C7W6 258 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 PUS7Q96PZ0 661 aaKnown RBP14.53□□□□□ -0.08
LMCD1-201ENST00000157600 KIF1BO60333 1816 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 ZNF213O14771 459 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 EXOC6BQ9Y2D4 811 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 ZFYVE9O95405 1425 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 ZPR1O75312 459 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 PAFAH1B1P43034 410 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 DDX54Q8TDD1 881 aaKnown RBP14.53□□□□□ -0.08
LMCD1-201ENST00000157600 PRIMPOLQ96LW4 560 aa14.53□□□□□ -0.08
LMCD1-201ENST00000157600 IFI16Q16666 785 aaKnown RBP14.52□□□□□ -0.08
LMCD1-201ENST00000157600 CCDC102AQ96A19 550 aa14.52□□□□□ -0.08
LMCD1-201ENST00000157600 SSRP1Q08945 709 aaKnown RBP14.52□□□□□ -0.08
LMCD1-201ENST00000157600 SPTY2D1Q68D10 685 aaPredicted RBP14.52□□□□□ -0.08
LMCD1-201ENST00000157600 FEZ1Q99689 392 aa14.52□□□□□ -0.08
LMCD1-201ENST00000157600 WASLO00401 505 aaPredicted RBP14.52□□□□□ -0.08
LMCD1-201ENST00000157600 ZFYP08048 801 aaPredicted RBP14.52□□□□□ -0.08
LMCD1-201ENST00000157600 CACNA2D4Q7Z3S7 1137 aa14.52□□□□□ -0.09
LMCD1-201ENST00000157600 TMTC2Q8N394 836 aa14.52□□□□□ -0.09
LMCD1-201ENST00000157600 CUL5Q93034 780 aa14.52□□□□□ -0.09
LMCD1-201ENST00000157600 ECHDC1Q9NTX5 307 aa14.52□□□□□ -0.09
LMCD1-201ENST00000157600 GCC2Q8IWJ2 1684 aa14.52□□□□□ -0.09
LMCD1-201ENST00000157600 CTAGE1Q96RT6 745 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms