RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Kiaa0319Q5SZV5 1081 aa18.51■□□□□ 0.55
Upf1-202ENSMUST00000215817 Cap2Q9CYT6 476 aa18.51■□□□□ 0.55
Upf1-202ENSMUST00000215817 Dnai2A2AC93 623 aa18.51■□□□□ 0.55
Upf1-202ENSMUST00000215817 Ppp2r3aB2RXC8 1150 aa18.51■□□□□ 0.55
Upf1-202ENSMUST00000215817 Eif2ak4Q9QZ05 1648 aa18.5■□□□□ 0.55
Upf1-202ENSMUST00000215817 Ptpdc1Q6NZK8 747 aa18.5■□□□□ 0.55
Upf1-202ENSMUST00000215817 Slc14a2Q8R4T9 930 aa18.5■□□□□ 0.55
Upf1-202ENSMUST00000215817 Kdm5aQ3UXZ9 1690 aa18.5■□□□□ 0.55
Upf1-202ENSMUST00000215817 Rfx1P48377 963 aa18.5■□□□□ 0.55
Upf1-202ENSMUST00000215817 Ccdc183A2AJB1 534 aa18.5■□□□□ 0.55
Upf1-202ENSMUST00000215817 Pa2g4P50580 394 aaKnown RBP18.5■□□□□ 0.55
Upf1-202ENSMUST00000215817 CrebrfQ8CDG5 640 aaKnown RBP18.5■□□□□ 0.55
Upf1-202ENSMUST00000215817 Iqgap1Q9JKF1 1657 aaKnown RBP18.49■□□□□ 0.55
Upf1-202ENSMUST00000215817 Rnf20Q5DTM8 973 aa18.49■□□□□ 0.55
Upf1-202ENSMUST00000215817 NmiO35309 314 aa18.49■□□□□ 0.55
Upf1-202ENSMUST00000215817 Erich6bQ9D4S6 220 aa18.49■□□□□ 0.55
Upf1-202ENSMUST00000215817 Kank1E9Q238 1360 aa18.49■□□□□ 0.55
Upf1-202ENSMUST00000215817 Fam213aQ9CYH2 218 aa18.48■□□□□ 0.55
Upf1-202ENSMUST00000215817 SfswapQ3USH5 945 aaKnown RBP18.48■□□□□ 0.55
Upf1-202ENSMUST00000215817 MypopQ8R4U1 393 aa18.48■□□□□ 0.55
Upf1-202ENSMUST00000215817 Dip2bQ3UH60 1574 aa18.48■□□□□ 0.55
Upf1-202ENSMUST00000215817 Ttc21aQ8C0S4 1314 aa18.48■□□□□ 0.55
Upf1-202ENSMUST00000215817 Ttc5Q99LG4 440 aa18.48■□□□□ 0.55
Upf1-202ENSMUST00000215817 Ccp110Q7TSH4 1004 aa18.47■□□□□ 0.55
Upf1-202ENSMUST00000215817 Cfap69Q8BH53 942 aa18.47■□□□□ 0.55
Upf1-202ENSMUST00000215817 Kiaa0753Q6A000 959 aa18.47■□□□□ 0.55
Upf1-202ENSMUST00000215817 Pim2Q62070 370 aa18.46■□□□□ 0.55
Upf1-202ENSMUST00000215817 Cdk12Q14AX6 1484 aaKnown RBP18.46■□□□□ 0.55
Upf1-202ENSMUST00000215817 St5Q924W7 1134 aa18.46■□□□□ 0.55
Upf1-202ENSMUST00000215817 MycnP03966 462 aaKnown RBP18.46■□□□□ 0.55
Upf1-202ENSMUST00000215817 Brf1Q8CFK2 676 aa18.46■□□□□ 0.55
Upf1-202ENSMUST00000215817 Adamts7Q68SA9 1657 aa18.46■□□□□ 0.55
Upf1-202ENSMUST00000215817 Smarce1O54941 411 aaKnown RBP18.46■□□□□ 0.55
Upf1-202ENSMUST00000215817 Rrp12Q6P5B0 1295 aaKnown RBP18.46■□□□□ 0.55
Upf1-202ENSMUST00000215817 Bag3Q9JLV1 577 aaKnown RBP18.45■□□□□ 0.54
Upf1-202ENSMUST00000215817 Gemin5Q8BX17 1502 aaKnown RBP18.45■□□□□ 0.54
Upf1-202ENSMUST00000215817 Filip1lQ6P6L0 1131 aa18.45■□□□□ 0.54
Upf1-202ENSMUST00000215817 Kdm2bQ6P1G2 1309 aa18.45■□□□□ 0.54
Upf1-202ENSMUST00000215817 Bcar3Q9QZK2 820 aa18.44■□□□□ 0.54
Upf1-202ENSMUST00000215817 AceP09470 1312 aa18.44■□□□□ 0.54
Upf1-202ENSMUST00000215817 Cavin2Q63918 418 aaKnown RBP18.44■□□□□ 0.54
Upf1-202ENSMUST00000215817 Jakmip1Q8BVL9 626 aa18.44■□□□□ 0.54
Upf1-202ENSMUST00000215817 Tmem143Q8VD26 458 aa18.44■□□□□ 0.54
Upf1-202ENSMUST00000215817 Dbndd1Q9CZ00 160 aa18.44■□□□□ 0.54
Upf1-202ENSMUST00000215817 Plekho1Q9JIY0 408 aa18.44■□□□□ 0.54
Upf1-202ENSMUST00000215817 Cops6O88545 324 aa18.43■□□□□ 0.54
Upf1-202ENSMUST00000215817 Fam13aQ8BGI4 693 aa18.43■□□□□ 0.54
Upf1-202ENSMUST00000215817 Tmem87bQ8BKU8 555 aa18.43■□□□□ 0.54
Upf1-202ENSMUST00000215817 Il1rapl2Q9ERS6 686 aa18.43■□□□□ 0.54
Upf1-202ENSMUST00000215817 Ppp1r3fQ9JIG4 799 aa18.43■□□□□ 0.54
Upf1-202ENSMUST00000215817 Abca17E9PX95 1733 aa18.43■□□□□ 0.54
Upf1-202ENSMUST00000215817 Duxf3A0A0N4SV92 674 aa18.43■□□□□ 0.54
Upf1-202ENSMUST00000215817 CltaO08585 235 aa18.43■□□□□ 0.54
Upf1-202ENSMUST00000215817 Ccdc47Q9D024 483 aaKnown RBP18.43■□□□□ 0.54
Upf1-202ENSMUST00000215817 Sema6bO54951 886 aa18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 NppbP40753 121 aa18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 Egfem1Q8C088 590 aa18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 FosbP13346 338 aa18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 Cct4P80315 539 aaKnown RBP18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 Ppp1r37Q8BKR5 712 aa18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 Nsd3Q6P2L6 1439 aa18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 Glg1Q61543 1175 aaKnown RBP18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 ParvgQ9ERD8 331 aa18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 Syde2E9PUP1 1314 aa18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 KdrP35918 1367 aa18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 Tbc1d7Q9D0K0 293 aa18.42■□□□□ 0.54
Upf1-202ENSMUST00000215817 NsmfQ99NF2 532 aa18.41■□□□□ 0.54
Upf1-202ENSMUST00000215817 LratQ9JI60 231 aa18.41■□□□□ 0.54
Upf1-202ENSMUST00000215817 Ehmt1Q5DW34 1296 aa18.41■□□□□ 0.54
Upf1-202ENSMUST00000215817 CpvlQ9D3S9 478 aa18.41■□□□□ 0.54
Upf1-202ENSMUST00000215817 Casc1Q6TDU8 730 aa18.41■□□□□ 0.54
Upf1-202ENSMUST00000215817 Pcmtd1P59913 357 aa18.41■□□□□ 0.54
Upf1-202ENSMUST00000215817 FanclQ9CR14 375 aa18.41■□□□□ 0.54
Upf1-202ENSMUST00000215817 Stox1B2RQL2 990 aa18.4■□□□□ 0.54
Upf1-202ENSMUST00000215817 IntuQ059U7 942 aa18.4■□□□□ 0.54
Upf1-202ENSMUST00000215817 Sde2Q8K1J5 448 aaKnown RBP18.4■□□□□ 0.54
Upf1-202ENSMUST00000215817 Atp6v1dP57746 247 aa18.4■□□□□ 0.54
Upf1-202ENSMUST00000215817 Terf1P70371 421 aa18.4■□□□□ 0.54
Upf1-202ENSMUST00000215817 CemipQ8BI06 1361 aa18.4■□□□□ 0.54
Upf1-202ENSMUST00000215817 Kifc2O08672 792 aa18.39■□□□□ 0.54
Upf1-202ENSMUST00000215817 Rhot2Q8JZN7 620 aa18.39■□□□□ 0.54
Upf1-202ENSMUST00000215817 HmcesQ8R1M0 353 aaKnown RBP18.39■□□□□ 0.53
Upf1-202ENSMUST00000215817 Ipo4Q8VI75 1082 aa18.39■□□□□ 0.53
Upf1-202ENSMUST00000215817 Zbtb1Q91VL9 713 aa18.39■□□□□ 0.53
Upf1-202ENSMUST00000215817 Foxp4Q9DBY0 795 aaKnown RBP18.39■□□□□ 0.53
Upf1-202ENSMUST00000215817 Hspa2P17156 633 aa18.39■□□□□ 0.53
Upf1-202ENSMUST00000215817 Foxo3Q9WVH4 672 aa18.39■□□□□ 0.53
Upf1-202ENSMUST00000215817 Ppp1r21Q3TDD9 780 aa18.39■□□□□ 0.53
Upf1-202ENSMUST00000215817 Znf18Q810A1 556 aa18.39■□□□□ 0.53
Upf1-202ENSMUST00000215817 UvssaQ9D479 717 aa18.39■□□□□ 0.53
Upf1-202ENSMUST00000215817 TrhQ62361 256 aa18.38■□□□□ 0.53
Upf1-202ENSMUST00000215817 Plagl1Q9JLQ4 704 aa18.38■□□□□ 0.53
Upf1-202ENSMUST00000215817 Ttll7A4Q9F0 912 aa18.38■□□□□ 0.53
Upf1-202ENSMUST00000215817 Cplx2P84086 134 aa18.38■□□□□ 0.53
Upf1-202ENSMUST00000215817 Golim4Q8BXA1 655 aa18.38■□□□□ 0.53
Upf1-202ENSMUST00000215817 Usp19Q3UJD6 1360 aa18.38■□□□□ 0.53
Upf1-202ENSMUST00000215817 Pet2A2AHY8 747 aa18.37■□□□□ 0.53
Upf1-202ENSMUST00000215817 Prr29B1ARI9 187 aa18.37■□□□□ 0.53
Upf1-202ENSMUST00000215817 Speer4dL7N216 212 aa18.37■□□□□ 0.53
Upf1-202ENSMUST00000215817 Casp1P29452 402 aa18.37■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms