RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 SlkO54988 1233 aa13.39□□□□□ -0.27
Ift88-201ENSMUST00000122063 SympkQ80X82 1284 aa13.39□□□□□ -0.27
Ift88-201ENSMUST00000122063 Zkscan1Q8BGS3 561 aaKnown RBP13.39□□□□□ -0.27
Ift88-201ENSMUST00000122063 Robo1O89026 1612 aa13.39□□□□□ -0.27
Ift88-201ENSMUST00000122063 Rasa1E9PYG6 1038 aa13.38□□□□□ -0.27
Ift88-201ENSMUST00000122063 CrklP47941 303 aa13.38□□□□□ -0.27
Ift88-201ENSMUST00000122063 Irf9Q61179 399 aa13.38□□□□□ -0.27
Ift88-201ENSMUST00000122063 ThemisQ8BGW0 636 aa13.38□□□□□ -0.27
Ift88-201ENSMUST00000122063 Bag4Q8CI61 457 aa13.38□□□□□ -0.27
Ift88-201ENSMUST00000122063 Edc3Q8K2D3 508 aaKnown RBP13.38□□□□□ -0.27
Ift88-201ENSMUST00000122063 Kcna6Q61923 529 aa13.38□□□□□ -0.27
Ift88-201ENSMUST00000122063 Brf1Q8CFK2 676 aa13.38□□□□□ -0.27
Ift88-201ENSMUST00000122063 Col15a1O35206 1367 aa13.38□□□□□ -0.27
Ift88-201ENSMUST00000122063 Il4rP16382 810 aa13.37□□□□□ -0.27
Ift88-201ENSMUST00000122063 NexnQ7TPW1 607 aa13.37□□□□□ -0.27
Ift88-201ENSMUST00000122063 Slc39a6Q8C145 765 aa13.37□□□□□ -0.27
Ift88-201ENSMUST00000122063 Filip1lQ6P6L0 1131 aa13.36□□□□□ -0.27
Ift88-201ENSMUST00000122063 Unc5clQ6R653 518 aa13.36□□□□□ -0.27
Ift88-201ENSMUST00000122063 Bicc1Q99MQ1 977 aaKnown RBP13.36□□□□□ -0.27
Ift88-201ENSMUST00000122063 EvcP57680 1005 aa13.36□□□□□ -0.27
Ift88-201ENSMUST00000122063 Prkab2Q6PAM0 271 aa13.36□□□□□ -0.27
Ift88-201ENSMUST00000122063 Mrps27Q8BK72 415 aaKnown RBP13.36□□□□□ -0.27
Ift88-201ENSMUST00000122063 EspnlQ3UYR4 1005 aa13.36□□□□□ -0.27
Ift88-201ENSMUST00000122063 Lmbr1lQ9D1E5 489 aa13.36□□□□□ -0.27
Ift88-201ENSMUST00000122063 Mlh1Q9JK91 760 aa13.36□□□□□ -0.27
Ift88-201ENSMUST00000122063 Ets1P27577 440 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Igfbp6P47880 238 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Cct4P80315 539 aaKnown RBP13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Cpa2Q504N0 417 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Speer4bQ9D9F7 267 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Atp10bB1AWN4 1474 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Simc1E9Q6E9 1354 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Ttll7A4Q9F0 912 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Nol12Q8BG17 217 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Phkg2Q9DB30 406 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 PigbQ9JJQ0 542 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Taf7Q9R1C0 341 aa13.35□□□□□ -0.27
Ift88-201ENSMUST00000122063 Atg3Q9CPX6 314 aa13.34□□□□□ -0.27
Ift88-201ENSMUST00000122063 TefQ9JLC6 301 aa13.34□□□□□ -0.27
Ift88-201ENSMUST00000122063 Nid2O88322 1403 aa13.34□□□□□ -0.27
Ift88-201ENSMUST00000122063 Grm8P47743 908 aa13.34□□□□□ -0.27
Ift88-201ENSMUST00000122063 Scaf1Q5U4C3 1256 aaKnown RBP13.34□□□□□ -0.27
Ift88-201ENSMUST00000122063 PogkQ80TC5 607 aa13.34□□□□□ -0.27
Ift88-201ENSMUST00000122063 Plcd4Q8K3R3 807 aa13.34□□□□□ -0.27
Ift88-201ENSMUST00000122063 Pmfbp1Q9WVQ0 1022 aa13.34□□□□□ -0.27
Ift88-201ENSMUST00000122063 Siglec1Q62230 1695 aa13.34□□□□□ -0.27
Ift88-201ENSMUST00000122063 Acsbg1Q99PU5 721 aa13.33□□□□□ -0.27
Ift88-201ENSMUST00000122063 Nrxn3Q6P9K9 1571 aa13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 Gm21663A0A0G2JE01 267 aa13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 Gm7361D3Z6R1 267 aa13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 5031410I06RikE9Q4E0 267 aa13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 Gm1979E9QAN3 267 aa13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 Gm5862K7N5V5 267 aa13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 Gm10220K7N660 267 aa13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 Zbtb3Q91X45 518 aa13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 Eif3aP23116 1344 aaKnown RBP13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 AnlnQ8K298 1121 aaKnown RBP13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 Flt4P35917 1363 aa13.33□□□□□ -0.28
Ift88-201ENSMUST00000122063 Alpk3Q924C5 1678 aa13.32□□□□□ -0.28
Ift88-201ENSMUST00000122063 LlphQ9D945 130 aaKnown RBP13.32□□□□□ -0.28
Ift88-201ENSMUST00000122063 Unc13bQ9Z1N9 1602 aa13.32□□□□□ -0.28
Ift88-201ENSMUST00000122063 Larp1Q6ZQ58 1072 aaKnown RBP13.32□□□□□ -0.28
Ift88-201ENSMUST00000122063 Asic4Q7TNS7 539 aa13.32□□□□□ -0.28
Ift88-201ENSMUST00000122063 Tmem119Q8R138 280 aa13.32□□□□□ -0.28
Ift88-201ENSMUST00000122063 Slx4ipQ9D7Y9 413 aa13.31□□□□□ -0.28
Ift88-201ENSMUST00000122063 Il1rapl2Q9ERS6 686 aa13.31□□□□□ -0.28
Ift88-201ENSMUST00000122063 F2rP30558 430 aa13.31□□□□□ -0.28
Ift88-201ENSMUST00000122063 Nol8Q3UHX0 1147 aaKnown RBP13.31□□□□□ -0.28
Ift88-201ENSMUST00000122063 Pof1bQ8K4L4 587 aa13.31□□□□□ -0.28
Ift88-201ENSMUST00000122063 Txnrd1Q9JMH6 613 aa13.31□□□□□ -0.28
Ift88-201ENSMUST00000122063 PtmaP26350 111 aa13.31□□□□□ -0.28
Ift88-201ENSMUST00000122063 Card10P58660 1021 aa13.31□□□□□ -0.28
Ift88-201ENSMUST00000122063 Slc26a8Q8R0C3 999 aa13.31□□□□□ -0.28
Ift88-201ENSMUST00000122063 Pdia6Q922R8 440 aaKnown RBP13.31□□□□□ -0.28
Ift88-201ENSMUST00000122063 Neurod6P48986 337 aa13.3□□□□□ -0.28
Ift88-201ENSMUST00000122063 St18Q80TY4 1045 aa13.3□□□□□ -0.28
Ift88-201ENSMUST00000122063 Noc3lQ8VI84 807 aaKnown RBP13.3□□□□□ -0.28
Ift88-201ENSMUST00000122063 Gm21680A0A0G2JGR8 267 aa13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 NmiO35309 314 aa13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 GpkowQ56A08 488 aa13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 Pdzrn3Q69ZS0 1063 aa13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 Mum1Q6DID5 682 aa13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 RgmbQ7TQ33 436 aa13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 Slc5a1Q8C3K6 665 aa13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 KinQ8K339 391 aa13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 Rtn4Q99P72 1162 aaKnown RBP13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 Zdhhc9P59268 364 aa13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 Abcc4E9Q236 1325 aa13.29□□□□□ -0.28
Ift88-201ENSMUST00000122063 Vwa3bJ9JI28 736 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 AppP12023 770 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 Gjb2Q00977 226 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 Zpr1Q62384 459 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 4930572O03RikQ8C5Y0 211 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 4930504O13RikQ8C5Z9 145 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 Top1mtQ8R4U6 593 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 Rapgef3Q8VCC8 918 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 Efcab2Q9CQ46 164 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 Rad50P70388 1312 aa13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 Smarce1O54941 411 aaKnown RBP13.28□□□□□ -0.28
Ift88-201ENSMUST00000122063 Atp6v1dP57746 247 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms