RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Ppp1r42Q8R1Z4 357 aa18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 MicalclQ9D5U9 680 aa18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 PzpQ61838 1495 aa18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Ift57Q8BXG3 429 aa18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Adcy10Q8C0T9 1614 aa18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Brf1Q8CFK2 676 aa18.4■□□□□ 0.54
Clcn3-203ENSMUST00000093490 PalldQ9ET54 1408 aa18.4■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Lrrc45Q8CIM1 670 aa18.4■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Magi3Q9EQJ9 1476 aa18.4■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Prkar2bP31324 416 aa18.4■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Pms1Q8K119 917 aa18.4■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Phlpp2Q8BXA7 1320 aa18.4■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Smarcc1P97496 1104 aa18.39■□□□□ 0.54
Clcn3-203ENSMUST00000093490 3425401B19RikD3Z1D3 1412 aa18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Adck5Q80V03 582 aa18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Prrc2bQ7TPM1 1486 aaKnown RBP18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Izumo3A6PWV3 263 aa18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Fam43aQ8BUP8 424 aa18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Map9Q3TRR0 646 aa18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Lamb3Q61087 1168 aa18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Speer4dL7N216 212 aa18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 MycnP03966 462 aaKnown RBP18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Chpf2Q3UU43 768 aa18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 St5Q924W7 1134 aa18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Rcan3Q9JKK0 239 aa18.39■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Lrrc9Q8CDN9 1456 aa18.38■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Zmym4A2A791 1549 aaKnown RBP18.38■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Plekho1Q9JIY0 408 aa18.38■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Abcc6Q9R1S7 1498 aa18.38■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Fam13aQ8BGI4 693 aa18.37■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Rsph6aQ8CDR2 708 aa18.37■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Commd10Q8JZY2 202 aa18.37■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Ccdc83Q9D4V3 305 aa18.37■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Skint5A7XUY5 1461 aa18.37■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Znf692Q3U381 531 aa18.37■□□□□ 0.53
Clcn3-203ENSMUST00000093490 NapbP28663 298 aa18.37■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Taf7Q9R1C0 341 aa18.37■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Anapc15-psA0A140T8L6 141 aa18.36■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Ccdc172Q810N9 267 aa18.36■□□□□ 0.53
Clcn3-203ENSMUST00000093490 CenphQ9QYM8 241 aa18.36■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Kdm3bQ6ZPY7 1562 aa18.36■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Eif5P59325 429 aaKnown RBP18.36■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Gnl2Q99LH1 728 aaKnown RBP18.36■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Atf7ipQ7TT18 1306 aa18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Zc3h12cQ5DTV4 884 aa18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Map3k2Q61083 619 aa18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Larp1Q6ZQ58 1072 aaKnown RBP18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Ccdc39Q9D5Y1 937 aa18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Fmn2Q9JL04 1578 aa18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Abcf1Q6P542 837 aaKnown RBP18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Eif4g3Q80XI3 1579 aaKnown RBP18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Galntl5Q9D4M9 431 aa18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Terf2O35144 541 aa18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Gjb2Q00977 226 aa18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Bms1Q6PGF5 1284 aaKnown RBP18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Cpsf1Q9EPU4 1441 aaKnown RBP18.35■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Efcab6Q6P1E8 1516 aa18.34■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Lmtk2Q3TYD6 1471 aa18.34■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Ces1aE9PYP1 563 aa18.34■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Abca5Q8K448 1642 aa18.34■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Mast1Q9R1L5 1570 aa18.34■□□□□ 0.53
Clcn3-203ENSMUST00000093490 SfswapQ3USH5 945 aaKnown RBP18.34■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Slc13a4Q8BZ82 625 aa18.33■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Polr3dQ91WD1 398 aa18.33■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Efcab2Q9CQ46 164 aa18.33■□□□□ 0.53
Clcn3-203ENSMUST00000093490 ZwintQ9CQU5 252 aa18.33■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Gse1Q3U3C9 1213 aa18.33■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Ccdc178Q8CDV0 866 aa18.33■□□□□ 0.53
Clcn3-203ENSMUST00000093490 Hfm1D3Z4R1 1434 aa18.33■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Q3UPC7 1272 aa18.33■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Cyp7a1Q64505 503 aa18.33■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Cep55Q8BT07 462 aa18.33■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Cep89Q9CZX2 791 aa18.33■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Traf3ip1Q149C2 625 aa18.33■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Frmd3Q8BHD4 595 aa18.33■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Tbc1d32Q3URV1 1296 aa18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Nip7Q9CXK8 180 aaKnown RBP18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Rai14Q9EP71 979 aaKnown RBP18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 ParvgQ9ERD8 331 aa18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Ddb1Q3U1J4 1140 aaKnown RBP18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 LarsQ8BMJ2 1178 aa18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Uggt2E9Q4X2 1504 aa18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Pafah1b1P63005 410 aaKnown RBP18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Dnajc2P54103 621 aaKnown RBP18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Cpa2Q504N0 417 aa18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Cdan1Q8CC12 1239 aa18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Nup133Q8R0G9 1155 aa18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Tmod2Q9JKK7 351 aa18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Lrrc7Q80TE7 1490 aa18.32■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Rapgef3Q8VCC8 918 aa18.31■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Pola1P33609 1465 aa18.31■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Tmem266Q8BZB3 538 aa18.31■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Igbp1bQ9QZ29 343 aa18.31■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Ccdc181Q80ZU5 509 aa18.31■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Ankrd44B2RXR6 993 aa18.3■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Cavin2Q63918 418 aaKnown RBP18.3■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Znf18Q810A1 556 aa18.3■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Slc14a2Q8R4T9 930 aa18.3■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Cyp2ab1S4R196 498 aa18.3■□□□□ 0.52
Clcn3-203ENSMUST00000093490 Ccdc191J3QQ27 883 aa18.3■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms