RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Nat10Q8K224 1024 aaKnown RBP12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Mrpl12Q9DB15 201 aaKnown RBP12.24□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ces1hD3Z298 562 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Jakmip1Q8BVL9 626 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Dzip1lQ499E4 774 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Smtnl1Q99LM3 459 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Cdc37l1Q9CZP7 335 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Map9Q3TRR0 646 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Tbc1d2bQ3U0J8 965 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Homer1Q9Z2Y3 366 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Plekhh1Q80TI1 1356 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 NefhP19246 1090 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Znf219Q6IQX8 726 aa12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Xpo5Q924C1 1204 aaKnown RBP12.23□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Eif6O55135 245 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ppp1r15aP17564 657 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Neurog2P70447 263 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Tom1l2Q5SRX1 507 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 OscarQ8VBT3 265 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ak7Q9D2H2 614 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 SlmapQ3URD3 845 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Cc2d1bQ8BRN9 848 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 GptQ8QZR5 496 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ctage5Q8R311 779 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Knop1Q9Z2Q2 478 aaKnown RBP12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 TnikP83510 1323 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 DroshaQ5HZJ0 1373 aaKnown RBP12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Arap1Q4LDD4 1452 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Rrbp1Q99PL5 1605 aaKnown RBP12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Rad23bP54728 416 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Pafah1b1P63005 410 aaKnown RBP12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Cct4P80315 539 aaKnown RBP12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Gnat3Q3V3I2 354 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ppp1r9bQ6R891 817 aaKnown RBP12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ddx10Q80Y44 875 aaKnown RBP12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Cep55Q8BT07 462 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ivns1abpQ920Q8 642 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Cwc25Q9DBF7 416 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Krt85Q9Z2T6 507 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Slc27a3O88561 667 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ccnl1Q52KE7 532 aaKnown RBP12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ccdc155Q80VJ8 648 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Lrriq1Q0P5X1 1673 aa12.22□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Znf428Q8C1M2 176 aa12.21□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Shtn1Q8K2Q9 631 aa12.21□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Trim11Q99PQ2 467 aa12.21□□□□□ -0.45
Rtn3-204ENSMUST00000088171 StambpQ9CQ26 424 aa12.21□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Dph6Q9CQ28 267 aa12.21□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Ppp6r1Q7TSI3 856 aa12.21□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Zcchc11B2RX14 1644 aaKnown RBP12.21□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Babam1Q3UI43 333 aa12.21□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Txndc16Q7TN22 820 aa12.21□□□□□ -0.45
Rtn3-204ENSMUST00000088171 CenphQ9QYM8 241 aa12.21□□□□□ -0.45
Rtn3-204ENSMUST00000088171 Tmem94Q7TSH8 1360 aa12.21□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Tmem87bQ8BKU8 555 aa12.21□□□□□ -0.46
Rtn3-204ENSMUST00000088171 SafbD3YXK2 937 aaKnown RBP12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Speer3W4VSP1 261 aa12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Cnnm3Q32NY4 713 aa12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Sde2Q8K1J5 448 aaKnown RBP12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Gbp4Q61107 620 aa12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Ctnna2Q61301 953 aa12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Ces5aQ6AW46 575 aa12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Rnf214Q8BFU3 668 aaKnown RBP12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 AdpgkQ8VDL4 496 aa12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Brms1Q99N20 246 aa12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Naip6Q9JIB6 1403 aa12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 P4ha1Q60715 534 aa12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Q9D5Q8 446 aa12.2□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Arhgef11Q68FM7 1552 aa12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Gm42641I6L9G2 585 aa12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 AtripQ8BMG1 785 aa12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 KarsQ99MN1 595 aaKnown RBP12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Tpd52l2Q9CYZ2 220 aaKnown RBP12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Bag1Q60739 355 aa12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Klhdc4Q921I2 584 aa12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Cep170Q6A065 1588 aa12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Naip1Q9QWK5 1403 aa12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Api5O35841 504 aaKnown RBP12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Idi2Q8BFZ6 227 aa12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Gle1Q8R322 699 aa12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Lrrc59Q922Q8 307 aaKnown RBP12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Sh3tc1G3X9F6 1346 aa12.19□□□□□ -0.46
Rtn3-204ENSMUST00000088171 PtprtQ99M80 1454 aa12.18□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Elf1Q60775 612 aa12.18□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Irf9Q61179 399 aa12.18□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Tmem67Q8BR76 992 aa12.18□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Olfr247E9PVJ7 320 aa12.18□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Olfr819K7N727 320 aa12.18□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Usp5P56399 858 aaKnown RBP12.18□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Chmp6P0C0A3 200 aa12.18□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Mcm10Q0VBD2 885 aa12.17□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Rad17Q6NXW6 688 aa12.17□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Zmynd15Q8C0R7 736 aa12.17□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Bag3Q9JLV1 577 aaKnown RBP12.17□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Zfp644E9QA22 1323 aa12.17□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Tbc1d7Q9D0K0 293 aa12.17□□□□□ -0.46
Rtn3-204ENSMUST00000088171 AdnpQ9Z103 1108 aaKnown RBP12.17□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Fbf1A2A870 1173 aa12.17□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Stx8O88983 236 aa12.17□□□□□ -0.46
Rtn3-204ENSMUST00000088171 Ddx23D3Z0M9 819 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms