RNA–Protein interactions for RNA: ENSMUST00000067005.10

Syne3-201, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syne3, Length 5,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-201ENSMUST00000067005 Arhgef40Q3UPH7 1517 aa17.22■□□□□ 0.35
Syne3-201ENSMUST00000067005 Slf2Q6P9P0 1278 aa17.22■□□□□ 0.35
Syne3-201ENSMUST00000067005 Cep89Q9CZX2 791 aa17.22■□□□□ 0.35
Syne3-201ENSMUST00000067005 Terf2O35144 541 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Eif4a2P10630 407 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Abcd1P48410 736 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Spg7Q3ULF4 781 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Trim27Q62158 513 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Aldh8a1Q8BH00 487 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Tmem266Q8BZB3 538 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Slc5a4bQ91ZP4 660 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 EvcP57680 1005 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Scaf1Q5U4C3 1256 aaKnown RBP17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Slu7Q8BHJ9 585 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Ccdc150Q8CDI7 1110 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Brms1Q99N20 246 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Speer4dL7N216 212 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Cpa2Q504N0 417 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Klf15Q9EPW2 415 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Chaf1aQ9QWF0 911 aa17.21■□□□□ 0.35
Syne3-201ENSMUST00000067005 Aldh1l2Q8K009 923 aa17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Ttc5Q99LG4 440 aa17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Acsbg1Q99PU5 721 aa17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Plekho1Q9JIY0 408 aa17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Gli2Q0VGT2 1544 aa17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Larp1Q6ZQ58 1072 aaKnown RBP17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Prrc2bQ7TPM1 1486 aaKnown RBP17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Fbln2P37889 1221 aa17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Atp8b2P98199 1209 aa17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Dusp9Q7TNL7 452 aa17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Polr3dQ91WD1 398 aa17.2■□□□□ 0.34
Syne3-201ENSMUST00000067005 Jakmip2D3YXK0 820 aa17.19■□□□□ 0.34
Syne3-201ENSMUST00000067005 Galntl5Q9D4M9 431 aa17.19■□□□□ 0.34
Syne3-201ENSMUST00000067005 Izumo3A6PWV3 263 aa17.19■□□□□ 0.34
Syne3-201ENSMUST00000067005 Zap70P43404 618 aa17.19■□□□□ 0.34
Syne3-201ENSMUST00000067005 Il1rapl2Q9ERS6 686 aa17.19■□□□□ 0.34
Syne3-201ENSMUST00000067005 Gas2l3Q3UWW6 683 aa17.19■□□□□ 0.34
Syne3-201ENSMUST00000067005 Gimap5Q8BWF2 308 aa17.19■□□□□ 0.34
Syne3-201ENSMUST00000067005 Traf3ip1Q149C2 625 aa17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Krt25Q8VCW2 446 aa17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Igbp1bQ9QZ29 343 aa17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 LyarQ08288 388 aaKnown RBP17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Stx6Q9JKK1 255 aa17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Lrrc7Q80TE7 1490 aa17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Samd1D3YXK1 519 aa17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Rad23bP54728 416 aa17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Ltv1Q6NSQ7 470 aaKnown RBP17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Vps37dQ810I0 261 aa17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Sugp2Q8CH09 1067 aa17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 CenppQ9CZ92 286 aa17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Cwc15Q9JHS9 229 aaKnown RBP17.18■□□□□ 0.34
Syne3-201ENSMUST00000067005 Lamb3Q61087 1168 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Tmem132eQ6IEE6 982 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Dmrt2Q8BG36 561 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Nphp4P59240 1425 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Ifit1bl2Q3U687 466 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Zranb1Q7M760 708 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Mrps27Q8BK72 415 aaKnown RBP17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Nsfl1cQ9CZ44 370 aaKnown RBP17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 SfswapQ3USH5 945 aaKnown RBP17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Ncbp3Q8BZR9 615 aaKnown RBP17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Nup133Q8R0G9 1155 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Mast1Q9R1L5 1570 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Vamp4O70480 141 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Aplp1Q03157 653 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Slc13a4Q8BZ82 625 aa17.17■□□□□ 0.34
Syne3-201ENSMUST00000067005 Ampd3O08739 766 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Golim4Q8BXA1 655 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Edc4Q3UJB9 1406 aaKnown RBP17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Fam135bQ9DAI6 1403 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Fam83gQ5SWY7 812 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 GckrQ91X44 587 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Dctn1O08788 1281 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Ppp4r3aQ6P2K6 820 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Erlin2Q8BFZ9 340 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Fmn2Q9JL04 1578 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Ces1hD3Z298 562 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Ankrd1Q9CR42 319 aa17.16■□□□□ 0.34
Syne3-201ENSMUST00000067005 Brd1E9PZ26 1189 aaKnown RBP17.15■□□□□ 0.34
Syne3-201ENSMUST00000067005 Fam160b2Q80YR2 744 aa17.15■□□□□ 0.34
Syne3-201ENSMUST00000067005 Klhdc4Q921I2 584 aa17.15■□□□□ 0.34
Syne3-201ENSMUST00000067005 Grm8P47743 908 aa17.15■□□□□ 0.34
Syne3-201ENSMUST00000067005 Bag4Q8CI61 457 aa17.15■□□□□ 0.34
Syne3-201ENSMUST00000067005 Amotl2Q8K371 772 aa17.15■□□□□ 0.34
Syne3-201ENSMUST00000067005 Abca5Q8K448 1642 aa17.15■□□□□ 0.34
Syne3-201ENSMUST00000067005 Otud6bQ8K2H2 294 aa17.15■□□□□ 0.34
Syne3-201ENSMUST00000067005 Nkx1-2P42580 305 aa17.15■□□□□ 0.34
Syne3-201ENSMUST00000067005 Rai14Q9EP71 979 aaKnown RBP17.15■□□□□ 0.34
Syne3-201ENSMUST00000067005 Znf692Q3U381 531 aa17.14■□□□□ 0.34
Syne3-201ENSMUST00000067005 Paf1Q8K2T8 535 aa17.14■□□□□ 0.34
Syne3-201ENSMUST00000067005 Gtf2a1Q99PM3 378 aa17.14■□□□□ 0.34
Syne3-201ENSMUST00000067005 Gm10093D3YYI8 482 aa17.14■□□□□ 0.33
Syne3-201ENSMUST00000067005 Hdac1O09106 482 aaKnown RBP17.14■□□□□ 0.33
Syne3-201ENSMUST00000067005 Bms1Q6PGF5 1284 aaKnown RBP17.14■□□□□ 0.33
Syne3-201ENSMUST00000067005 Gnl2Q99LH1 728 aaKnown RBP17.14■□□□□ 0.33
Syne3-201ENSMUST00000067005 Bloc1s2Q9CWG9 143 aa17.14■□□□□ 0.33
Syne3-201ENSMUST00000067005 Mcmdc2E9Q956 681 aa17.14■□□□□ 0.33
Syne3-201ENSMUST00000067005 Ccdc102aQ3TMW1 549 aa17.14■□□□□ 0.33
Syne3-201ENSMUST00000067005 Mrpl44Q9CY73 333 aaKnown RBP17.14■□□□□ 0.33
Syne3-201ENSMUST00000067005 Cdk13Q69ZA1 1511 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms