RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Mctp1E9PV86 951 aa12.33□□□□□ -0.44
Trim17-201ENSMUST00000047697 Q3UJC8 639 aa12.33□□□□□ -0.44
Trim17-201ENSMUST00000047697 Syt1P46096 421 aa12.33□□□□□ -0.44
Trim17-201ENSMUST00000047697 Grpel1Q99LP6 217 aa12.33□□□□□ -0.44
Trim17-201ENSMUST00000047697 Mroh1E0CZ22 1640 aa12.33□□□□□ -0.44
Trim17-201ENSMUST00000047697 Zfp51Q3U4L8 781 aa12.32□□□□□ -0.44
Trim17-201ENSMUST00000047697 Elmsan1E9Q2I4 1089 aaKnown RBP12.32□□□□□ -0.44
Trim17-201ENSMUST00000047697 Atp10aO54827 1508 aa12.32□□□□□ -0.44
Trim17-201ENSMUST00000047697 Zkscan7E9PVW1 718 aa12.32□□□□□ -0.44
Trim17-201ENSMUST00000047697 Ier5O89113 308 aa12.32□□□□□ -0.44
Trim17-201ENSMUST00000047697 Usp25P57080 1055 aa12.32□□□□□ -0.44
Trim17-201ENSMUST00000047697 R3hcc1Q8BSI6 488 aa12.32□□□□□ -0.44
Trim17-201ENSMUST00000047697 Tsr2Q8C8T8 191 aa12.32□□□□□ -0.44
Trim17-201ENSMUST00000047697 Tomm22Q9CPQ3 142 aa12.32□□□□□ -0.44
Trim17-201ENSMUST00000047697 Cct4P80315 539 aaKnown RBP12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 EspnlQ3UYR4 1005 aa12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 Tmem132eQ6IEE6 982 aa12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 Tecpr2Q3UH45 1423 aa12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 Neurod6P48986 337 aa12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 Pa2g4P50580 394 aaKnown RBP12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 Wdr93Q402B2 695 aa12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 Unc5clQ6R653 518 aa12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 Il1rapl2Q9ERS6 686 aa12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 Sass6Q80UK7 654 aa12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 Tti2Q8BGV4 512 aa12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 Noc3lQ8VI84 807 aaKnown RBP12.31□□□□□ -0.44
Trim17-201ENSMUST00000047697 PtprmP28828 1452 aa12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Lekr1B2RVN1 116 aa12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 SrrtQ99MR6 875 aaKnown RBP12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Rufy3Q9D394 469 aa12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Rad50P70388 1312 aa12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Ppfia3P60469 1194 aa12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Nop14Q8R3N1 860 aaKnown RBP12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Cdkn1cP49919 348 aa12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Nom1Q3UFM5 854 aaKnown RBP12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Rnf20Q5DTM8 973 aa12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Zscan22Q8BGS5 496 aa12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Ccdc94Q9D6J3 314 aa12.3□□□□□ -0.44
Trim17-201ENSMUST00000047697 Cdc42bpgQ80UW5 1551 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Topbp1Q6ZQF0 1515 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Znf541Q0GGX2 1363 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Ndufa8Q9DCJ5 172 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Nckap5lQ6GQX2 1323 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Ppfia1B2RXQ2 1266 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Rps6ka5Q8C050 863 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Ino80Q6ZPV2 1559 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Synj2Q9D2G5 1434 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Tlr7P58681 1050 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Rbm42Q91V81 474 aaKnown RBP12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Polr3dQ91WD1 398 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Hmgn5Q9JL35 406 aa12.29□□□□□ -0.44
Trim17-201ENSMUST00000047697 Disp3A3KFU9 1347 aa12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Nucb2P81117 420 aa12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Gm156Q58A37 223 aa12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 E4f1Q8CCE9 783 aa12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Slc26a8Q8R0C3 999 aa12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Ccer1Q9CQL2 403 aa12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Sipa1l1Q8C0T5 1782 aa12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Wdr33Q8K4P0 1330 aaKnown RBP12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Gsdma3Q5Y4Y6 464 aa12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Ifit2Q64112 472 aa12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Hnrnpul1Q8VDM6 859 aaKnown RBP12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Cdca7lQ922M5 438 aa12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Psma5Q9Z2U1 241 aaKnown RBP12.28□□□□□ -0.44
Trim17-201ENSMUST00000047697 Tpm3P21107 285 aaKnown RBP12.27□□□□□ -0.44
Trim17-201ENSMUST00000047697 Nol8Q3UHX0 1147 aaKnown RBP12.27□□□□□ -0.44
Trim17-201ENSMUST00000047697 Wdr24Q8CFJ9 790 aa12.27□□□□□ -0.44
Trim17-201ENSMUST00000047697 Igbp1bQ9QZ29 343 aa12.27□□□□□ -0.44
Trim17-201ENSMUST00000047697 Krt85Q9Z2T6 507 aa12.27□□□□□ -0.44
Trim17-201ENSMUST00000047697 Stk36Q69ZM6 1316 aa12.27□□□□□ -0.44
Trim17-201ENSMUST00000047697 Rbm8a2A0A0N4SUH6 174 aa12.27□□□□□ -0.45
Trim17-201ENSMUST00000047697 Esyt1Q3U7R1 1092 aaKnown RBP12.27□□□□□ -0.45
Trim17-201ENSMUST00000047697 Taf3Q5HZG4 932 aa12.27□□□□□ -0.45
Trim17-201ENSMUST00000047697 Jarid2Q62315 1234 aa12.27□□□□□ -0.45
Trim17-201ENSMUST00000047697 Zpr1Q62384 459 aa12.27□□□□□ -0.45
Trim17-201ENSMUST00000047697 Dhx30Q99PU8 1217 aaKnown RBP12.27□□□□□ -0.45
Trim17-201ENSMUST00000047697 Rbm8aQ9CWZ3 174 aa12.27□□□□□ -0.45
Trim17-201ENSMUST00000047697 Tbc1d8Q9Z1A9 1134 aa12.27□□□□□ -0.45
Trim17-201ENSMUST00000047697 AppP12023 770 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Ncbp1Q3UYV9 790 aaKnown RBP12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Zfp251Q6PCX8 632 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Hook1Q8BIL5 728 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Edc3Q8K2D3 508 aaKnown RBP12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Mx2Q9WVP9 655 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Plekhg1F6S200 1446 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 TatQ8QZR1 454 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Ccdc7Q9D541 371 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Akap12Q9WTQ5 1684 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Tyro3P55144 880 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Ano6Q6P9J9 911 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Ppp6r1Q7TSI3 856 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Cep57l1Q8VDS7 400 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Ahdc1Q6PAL7 1594 aaKnown RBP12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Nphp3Q7TNH6 1325 aa12.26□□□□□ -0.45
Trim17-201ENSMUST00000047697 Cd22P35329 862 aa12.25□□□□□ -0.45
Trim17-201ENSMUST00000047697 Btbd11Q6GQW0 1109 aa12.25□□□□□ -0.45
Trim17-201ENSMUST00000047697 Amotl2Q8K371 772 aa12.25□□□□□ -0.45
Trim17-201ENSMUST00000047697 Astn2Q80Z10 1352 aa12.25□□□□□ -0.45
Trim17-201ENSMUST00000047697 Zfp804bA0A0G2JGH6 1343 aa12.25□□□□□ -0.45
Trim17-201ENSMUST00000047697 Evi5lH3BKQ3 813 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms