RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 InsrP15208 1372 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Gm1043A0A140LJC2 1431 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Zscan29E9Q5B4 869 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Igf2bp2Q5SF07 592 aaKnown RBP11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Liat1Q810M6 228 aa11.39□□□□□ -0.59
Syne1-201ENSMUST00000041639 Gm18336A0A140LIU8 765 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Arglu1Q3UL36 271 aaKnown RBP11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Sass6Q80UK7 654 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Slc5a1Q8C3K6 665 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Brms1Q99N20 246 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 KdrP35918 1367 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Sdc2P43407 202 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Kank1E9Q238 1360 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Rad23bP54728 416 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Map3k2Q61083 619 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Snw1Q9CSN1 536 aaKnown RBP11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Nap1l5Q9JJF0 156 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ccdc191J3QQ27 883 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Tbc1d32Q3URV1 1296 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Zeb2Q9R0G7 1215 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Rbm19Q8R3C6 952 aaKnown RBP11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Klhdc4Q921I2 584 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Map2k1P31938 393 aa11.38□□□□□ -0.59
Syne1-201ENSMUST00000041639 Irf9Q61179 399 aa11.37□□□□□ -0.59
Syne1-201ENSMUST00000041639 Atf7Q8R0S1 413 aa11.37□□□□□ -0.59
Syne1-201ENSMUST00000041639 Bloc1s2Q9CWG9 143 aa11.37□□□□□ -0.59
Syne1-201ENSMUST00000041639 Tsg101Q61187 391 aa11.37□□□□□ -0.59
Syne1-201ENSMUST00000041639 IncenpQ9WU62 880 aa11.37□□□□□ -0.59
Syne1-201ENSMUST00000041639 Vps18Q8R307 973 aa11.37□□□□□ -0.59
Syne1-201ENSMUST00000041639 DmtnQ9WV69 405 aa11.37□□□□□ -0.59
Syne1-201ENSMUST00000041639 Cep135Q6P5D4 1140 aa11.37□□□□□ -0.59
Syne1-201ENSMUST00000041639 Tmx1Q8VBT0 278 aa11.37□□□□□ -0.59
Syne1-201ENSMUST00000041639 Duxf3A0A0N4SV92 674 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Gm10563F6WIE4 79 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Nkx1-2P42580 305 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Tceanc2Q8R2M0 207 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 FanclQ9CR14 375 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Mrpl44Q9CY73 333 aaKnown RBP11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Baiap2l1Q9DBJ3 514 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ccdc73Q8CDM4 1066 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Nfxl1E9Q8I7 918 aaKnown RBP11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Gjc1P28229 396 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 GnpatP98192 678 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Gse1Q3U3C9 1213 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ankrd1Q9CR42 319 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Slc7a3P70423 618 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 GphnQ8BUV3 769 aaKnown RBP11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 Lman1Q9D0F3 517 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 ZgpatQ8VDM1 511 aa11.36□□□□□ -0.59
Syne1-201ENSMUST00000041639 CebpzP53569 1052 aaKnown RBP11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Myd88P22366 296 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Acsbg1Q99PU5 721 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Klhl10Q9D5V2 608 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Magi1Q6RHR9 1471 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Stat1P42225 749 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Gng11P61953 73 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Pdcl2Q78Y63 240 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Vps16Q920Q4 839 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Zap70P43404 618 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Usp25P57080 1055 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ano2Q8CFW1 1002 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Smtnl1Q99LM3 459 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Q9D5Q8 446 aa11.35□□□□□ -0.59
Syne1-201ENSMUST00000041639 Cnga2Q62398 664 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ddx10Q80Y44 875 aaKnown RBP11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ripk4Q9ERK0 786 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Cetn2Q9R1K9 172 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ripply1Q2WG77 201 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Bbof1Q3V079 533 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 GptQ8QZR5 496 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ppfia1B2RXQ2 1266 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Cfap73J3QPZ5 306 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Rnf41Q8BH75 317 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Erlin1Q91X78 346 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 LlphQ9D945 130 aaKnown RBP11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Homer1Q9Z2Y3 366 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Catsper2A2ARP9 588 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Uspl1Q3ULM6 1089 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Pet2A2AHY8 747 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ctnnbl1Q9CWL8 563 aaKnown RBP11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Cacna2d4Q5RJF7 1116 aa11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Ccdc12Q8R344 166 aaKnown RBP11.34□□□□□ -0.59
Syne1-201ENSMUST00000041639 Metap2O08663 478 aaKnown RBP11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Snx13Q6PHS6 957 aa11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Mtmr3Q8K296 1196 aa11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Elp1Q7TT37 1333 aaKnown RBP11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Api5O35841 504 aaKnown RBP11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Gnat3Q3V3I2 354 aa11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ddx46Q569Z5 1032 aaKnown RBP11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Tmem87bQ8BKU8 555 aa11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Sil1Q9EPK6 465 aa11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Naip5Q9R016 1403 aa11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ercc3P49135 783 aa11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Bms1Q6PGF5 1284 aaKnown RBP11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Ctr9Q62018 1173 aaKnown RBP11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Zranb1Q7M760 708 aa11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Rprd2Q6NXI6 1469 aaKnown RBP11.33□□□□□ -0.6
Syne1-201ENSMUST00000041639 Nucb2P81117 420 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 Arhgef18Q6P9R4 1021 aa11.32□□□□□ -0.6
Syne1-201ENSMUST00000041639 LarsQ8BMJ2 1178 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms