RNA–Protein interactions for RNA: ENSMUST00000024620.6

Chd1-201, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Chd1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-201ENSMUST00000024620 Ccdc112A0AUP1 442 aa11.71□□□□□ -0.53
Chd1-201ENSMUST00000024620 Ddx42Q810A7 929 aaKnown RBP11.71□□□□□ -0.53
Chd1-201ENSMUST00000024620 Trerf1Q8BXJ2 1205 aa11.71□□□□□ -0.53
Chd1-201ENSMUST00000024620 Tmem259Q8CIV2 574 aa11.71□□□□□ -0.53
Chd1-201ENSMUST00000024620 Nlrp3Q8R4B8 1033 aa11.71□□□□□ -0.53
Chd1-201ENSMUST00000024620 Odf2lQ9D478 642 aa11.71□□□□□ -0.53
Chd1-201ENSMUST00000024620 Samd9lQ69Z37 1561 aa11.71□□□□□ -0.53
Chd1-201ENSMUST00000024620 Atp2b1G5E829 1220 aa11.71□□□□□ -0.54
Chd1-201ENSMUST00000024620 Neurod6P48986 337 aa11.71□□□□□ -0.54
Chd1-201ENSMUST00000024620 FntaQ61239 377 aa11.71□□□□□ -0.54
Chd1-201ENSMUST00000024620 Cep135Q6P5D4 1140 aa11.71□□□□□ -0.54
Chd1-201ENSMUST00000024620 Rasa4Q6PFQ7 802 aa11.71□□□□□ -0.54
Chd1-201ENSMUST00000024620 Bank1Q80VH0 783 aa11.71□□□□□ -0.54
Chd1-201ENSMUST00000024620 Mmel1Q9JLI3 765 aa11.71□□□□□ -0.54
Chd1-201ENSMUST00000024620 Ift140E9PY46 1464 aa11.71□□□□□ -0.54
Chd1-201ENSMUST00000024620 Smarce1O54941 411 aaKnown RBP11.7□□□□□ -0.54
Chd1-201ENSMUST00000024620 Kcna1P16388 495 aa11.7□□□□□ -0.54
Chd1-201ENSMUST00000024620 Fhod1Q6P9Q4 1197 aa11.7□□□□□ -0.54
Chd1-201ENSMUST00000024620 Recql4Q75NR7 1216 aaKnown RBP11.7□□□□□ -0.54
Chd1-201ENSMUST00000024620 Pank1Q8K4K6 548 aa11.7□□□□□ -0.54
Chd1-201ENSMUST00000024620 Sbno1Q689Z5 1390 aa11.7□□□□□ -0.54
Chd1-201ENSMUST00000024620 Jakmip3Q5DTN8 844 aa11.7□□□□□ -0.54
Chd1-201ENSMUST00000024620 Gtpbp10Q8K013 366 aa11.7□□□□□ -0.54
Chd1-201ENSMUST00000024620 Ftsj3Q9DBE9 838 aaKnown RBP11.7□□□□□ -0.54
Chd1-201ENSMUST00000024620 Slc34a2Q9DBP0 697 aa11.7□□□□□ -0.54
Chd1-201ENSMUST00000024620 Arhgef40Q3UPH7 1517 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Brd1E9PZ26 1189 aaKnown RBP11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Fam184bQ0KK56 942 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Bag1Q60739 355 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Tbc1d12Q6A039 696 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Cgnl1Q6AW69 1298 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Dnaaf4Q8R368 420 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Chchd3Q9CRB9 227 aaKnown RBP11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 KdrP35918 1367 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Nub1P54729 614 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Fmnl3Q6ZPF4 1028 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 RpainQ9CWY9 219 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 NbnQ9R207 751 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Rnf123Q5XPI3 1314 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Kif14L0N7N1 1674 aaKnown RBP11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Iqgap1Q9JKF1 1657 aaKnown RBP11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Nrg3O35181 713 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Tcf3P15806 651 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Q8BZJ8 459 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Ttc27Q8CD92 847 aa11.69□□□□□ -0.54
Chd1-201ENSMUST00000024620 Casz1Q9CWL2 1761 aa11.68□□□□□ -0.54
Chd1-201ENSMUST00000024620 Gm45015A0A140LII9 184 aa11.68□□□□□ -0.54
Chd1-201ENSMUST00000024620 Gm18336A0A140LIU8 765 aa11.68□□□□□ -0.54
Chd1-201ENSMUST00000024620 Rab3gap2Q8BMG7 1366 aa11.68□□□□□ -0.54
Chd1-201ENSMUST00000024620 SkilQ60665 675 aa11.68□□□□□ -0.54
Chd1-201ENSMUST00000024620 Tcp11l1Q8BTG3 509 aa11.68□□□□□ -0.54
Chd1-201ENSMUST00000024620 Znf568E9PYI1 671 aa11.67□□□□□ -0.54
Chd1-201ENSMUST00000024620 Phc3Q8CHP6 981 aa11.67□□□□□ -0.54
Chd1-201ENSMUST00000024620 Slc24a3Q99PD7 645 aa11.67□□□□□ -0.54
Chd1-201ENSMUST00000024620 CactinQ9CS00 772 aaKnown RBP11.67□□□□□ -0.54
Chd1-201ENSMUST00000024620 DonsonQ9QXP4 560 aa11.67□□□□□ -0.54
Chd1-201ENSMUST00000024620 Atp1a4Q9WV27 1032 aa11.67□□□□□ -0.54
Chd1-201ENSMUST00000024620 Gm9758Q80ZT2 255 aa11.67□□□□□ -0.54
Chd1-201ENSMUST00000024620 Ift57Q8BXG3 429 aa11.67□□□□□ -0.54
Chd1-201ENSMUST00000024620 Def6Q8C2K1 630 aa11.67□□□□□ -0.54
Chd1-201ENSMUST00000024620 Mta1Q8K4B0 715 aaKnown RBP11.67□□□□□ -0.54
Chd1-201ENSMUST00000024620 Surf1P09925 306 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Nap1l2P51860 460 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Mum1l1Q4VA55 681 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Trak2Q6P9N8 913 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Tmco5bQ80X59 307 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Efcab8Q8C9R9 203 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 RargP18911 458 aaKnown RBP11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Exoc5Q3TPX4 708 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Casc1Q6TDU8 730 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Rps6kc1Q8BLK9 1056 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Ccz1Q8C1Y8 480 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Hmgn5Q9JL35 406 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Tarbp1E9Q368 1579 aa11.66□□□□□ -0.54
Chd1-201ENSMUST00000024620 Ccdc40Q8BI79 1192 aa11.65□□□□□ -0.54
Chd1-201ENSMUST00000024620 Eif3cQ8R1B4 911 aaKnown RBP11.65□□□□□ -0.54
Chd1-201ENSMUST00000024620 Dact1Q8R4A3 778 aa11.65□□□□□ -0.54
Chd1-201ENSMUST00000024620 Zmym1Q3TJB1 983 aa11.65□□□□□ -0.54
Chd1-201ENSMUST00000024620 Serpinb6Q60854 378 aa11.65□□□□□ -0.54
Chd1-201ENSMUST00000024620 Ccdc186Q8C9S4 917 aa11.65□□□□□ -0.54
Chd1-201ENSMUST00000024620 Ferd3lQ923Z4 168 aa11.65□□□□□ -0.54
Chd1-201ENSMUST00000024620 Znf335A2A5K6 1337 aa11.65□□□□□ -0.54
Chd1-201ENSMUST00000024620 Kansl3A2RSY1 903 aaKnown RBP11.65□□□□□ -0.55
Chd1-201ENSMUST00000024620 Ranbp1P34022 203 aaKnown RBP11.65□□□□□ -0.55
Chd1-201ENSMUST00000024620 U2surpQ6NV83 1029 aaKnown RBP11.65□□□□□ -0.55
Chd1-201ENSMUST00000024620 Gnl3lQ6PGG6 577 aaKnown RBP11.65□□□□□ -0.55
Chd1-201ENSMUST00000024620 Nrbp1Q99J45 535 aa11.65□□□□□ -0.55
Chd1-201ENSMUST00000024620 Dmrtc1Q9D9R7 182 aa11.65□□□□□ -0.55
Chd1-201ENSMUST00000024620 Ppp2r3dQ9Z176 491 aa11.65□□□□□ -0.55
Chd1-201ENSMUST00000024620 Zkscan7E9PVW1 718 aa11.64□□□□□ -0.55
Chd1-201ENSMUST00000024620 Cchcr1Q8K2I2 770 aa11.64□□□□□ -0.55
Chd1-201ENSMUST00000024620 Flad1Q8R123 492 aa11.64□□□□□ -0.55
Chd1-201ENSMUST00000024620 Cep89Q9CZX2 791 aa11.64□□□□□ -0.55
Chd1-201ENSMUST00000024620 Tfip11Q9ERA6 838 aaKnown RBP11.64□□□□□ -0.55
Chd1-201ENSMUST00000024620 HalP35492 657 aa11.64□□□□□ -0.55
Chd1-201ENSMUST00000024620 NppbP40753 121 aa11.64□□□□□ -0.55
Chd1-201ENSMUST00000024620 Ddr1Q03146 911 aa11.64□□□□□ -0.55
Chd1-201ENSMUST00000024620 Pnpla2Q8BJ56 486 aa11.64□□□□□ -0.55
Chd1-201ENSMUST00000024620 Commd10Q8JZY2 202 aa11.64□□□□□ -0.55
Chd1-201ENSMUST00000024620 Cog6Q8R3I3 657 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms