RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ZNF655Q8N720 491 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-230ENST00000641927 CSNK1A1LQ8N752 337 aa16.69■□□□□ 0.26
PHGDH-230ENST00000641927 CAMKVQ8NCB2 501 aa16.69■□□□□ 0.26
PHGDH-230ENST00000641927 C10orf82Q8WW14 230 aa16.69■□□□□ 0.26
PHGDH-230ENST00000641927 SERPINI1Q99574 410 aa16.69■□□□□ 0.26
PHGDH-230ENST00000641927 MS4A8Q9BY19 250 aa16.69■□□□□ 0.26
PHGDH-230ENST00000641927 STARD5Q9NSY2 213 aa16.69■□□□□ 0.26
PHGDH-230ENST00000641927 NMRK1Q9NWW6 199 aa16.69■□□□□ 0.26
PHGDH-230ENST00000641927 TOR4AQ9NXH8 423 aa16.69■□□□□ 0.26
PHGDH-230ENST00000641927 VPS29Q9UBQ0 182 aa16.69■□□□□ 0.26
PHGDH-230ENST00000641927 SERTM1A2A2V5 107 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 SEC22BO75396 215 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 RSL1D1O76021 490 aaKnown RBP16.68■□□□□ 0.26
PHGDH-230ENST00000641927 RAP1GDS1P52306 607 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 SIM1P81133 766 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-230ENST00000641927 INSM1Q01101 510 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-230ENST00000641927 GPR19Q15760 415 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 AP5B1Q2VPB7 878 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 TOR1AIP1Q5JTV8 583 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 KHDRBS2Q5VWX1 349 aaKnown RBP16.68■□□□□ 0.26
PHGDH-230ENST00000641927 DHRS13Q6UX07 377 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 PPP3R2Q96LZ3 170 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 TMEM74Q96NL1 305 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 F2RL3Q96RI0 385 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 CENPKQ9BS16 269 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 NLNQ9BYT8 704 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 REXO4Q9GZR2 422 aaKnown RBP16.68■□□□□ 0.26
PHGDH-230ENST00000641927 CHRNA10Q9GZZ6 450 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 LRTM1Q9HBL6 345 aa16.68■□□□□ 0.26
PHGDH-230ENST00000641927 MDC1Q14676 2089 aaKnown RBP16.67■□□□□ 0.26
PHGDH-230ENST00000641927 E9PBE3 544 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 LSM1O15116 133 aaKnown RBP16.67■□□□□ 0.26
PHGDH-230ENST00000641927 P2RX6O15547 441 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 KLHL41O60662 606 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 SRPX2O60687 465 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-230ENST00000641927 CTSBP07858 339 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 SERPINA6P08185 405 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 FOLR1P15328 257 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 CSTF2P33240 577 aaKnown RBP eCLIP16.67■□□□□ 0.26
PHGDH-230ENST00000641927 CLDN6P56747 220 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 TRA2AQ13595 282 aaKnown RBP eCLIP16.67■□□□□ 0.26
PHGDH-230ENST00000641927 PWP1Q13610 501 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 COL9A2Q14055 689 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-230ENST00000641927 HKDC1Q2TB90 917 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 LSM12Q3MHD2 195 aaKnown RBP16.67■□□□□ 0.26
PHGDH-230ENST00000641927 WASHC2DQ5SRD0 308 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 LARP4Q71RC2 724 aaKnown RBP eCLIP16.67■□□□□ 0.262e-6■□□□□ 11.3
PHGDH-230ENST00000641927 FNDC5Q8NAU1 212 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 CEP70Q8NHQ1 597 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 MAELQ96JY0 434 aaKnown RBP16.67■□□□□ 0.26
PHGDH-230ENST00000641927 MRPL1Q9BYD6 325 aaKnown RBP16.67■□□□□ 0.26
PHGDH-230ENST00000641927 FANCEQ9HB96 536 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 C1orf109Q9NX04 203 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 CDV3Q9UKY7 258 aaKnown RBP16.67■□□□□ 0.26
PHGDH-230ENST00000641927 CCL27Q9Y4X3 112 aa16.67■□□□□ 0.26
PHGDH-230ENST00000641927 DMXL1Q9Y485 3027 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 LRIT2A6NDA9 550 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 TMEM150CB9EJG8 249 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 TBX6O95947 436 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-230ENST00000641927 CSRP1P21291 193 aaKnown RBP16.66■□□□□ 0.26
PHGDH-230ENST00000641927 HNRNPH1P31943 449 aaKnown RBP16.66■□□□□ 0.26
PHGDH-230ENST00000641927 PDX1P52945 283 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 PLA2G16P53816 162 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 STXBP1P61764 594 aaKnown RBP16.66■□□□□ 0.26
PHGDH-230ENST00000641927 RPL38P63173 70 aaKnown RBP16.66■□□□□ 0.26
PHGDH-230ENST00000641927 ZFP36L1Q07352 338 aaKnown RBP16.66■□□□□ 0.26
PHGDH-230ENST00000641927 FOXM1Q08050 763 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 CUL3Q13618 768 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 DEPDC1Q5TB30 811 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 DGLUCYQ7Z3D6 616 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 SLCO6A1Q86UG4 719 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 KCT2Q8NC54 265 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 ZCCHC10Q8TBK6 192 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 ACTRT2Q8TDY3 377 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 TM4SF19Q96DZ7 209 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 APIPQ96GX9 242 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 KLHL31Q9H511 634 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 PPT2Q9UMR5 302 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 G3BP2Q9UN86 482 aaKnown RBP16.66■□□□□ 0.26
PHGDH-230ENST00000641927 ARL2BPQ9Y2Y0 163 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 FAM186AA6NE01 2351 aa16.66■□□□□ 0.26
PHGDH-230ENST00000641927 ERI3O43414 337 aaKnown RBP16.65■□□□□ 0.26
PHGDH-230ENST00000641927 FTH1P19P0C7X4 201 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 LBPP18428 481 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 GABRA4P48169 554 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 NOVA1P51513 510 aaKnown RBP16.65■□□□□ 0.26
PHGDH-230ENST00000641927 ACSM2AQ08AH3 577 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 TUBB3Q13509 450 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 C16orf72Q14CZ0 275 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 C6orf136Q5SQH8 315 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 ACSM2BQ68CK6 577 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 C1orf52Q8N6N3 182 aaKnown RBP16.65■□□□□ 0.26
PHGDH-230ENST00000641927 CCDC197Q8NCU1 140 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 NT5CQ8TCD5 201 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 C17orf62Q9BQA9 187 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 CCDC28BQ9BUN5 200 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 C1orf50Q9BV19 199 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 FGF21Q9NSA1 209 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 AHSPQ9NZD4 102 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 RUVBL1Q9Y265 456 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms