RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 PADI4Q9UM07 663 aa9.88□□□□□ -0.83
PHGDH-224ENST00000641711 SNX6Q9UNH7 406 aa9.88□□□□□ -0.83
PHGDH-224ENST00000641711 DTNAQ9Y4J8 743 aa9.88□□□□□ -0.83
PHGDH-224ENST00000641711 AP4S1Q9Y587 144 aa9.88□□□□□ -0.83
PHGDH-224ENST00000641711 PCYT1BQ9Y5K3 369 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-224ENST00000641711 U3KQA8 63 aa9.88□□□□□ -0.83
PHGDH-224ENST00000641711 CFAP54Q96N23 3096 aa9.88□□□□□ -0.83
PHGDH-224ENST00000641711 MAGEA13PA6NCF6 341 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 A6NHS1 94 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 C9JVG2 144 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 KDM1AO60341 852 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 RFPL3O75679 317 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 KCNK5O95279 499 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 RPN2P04844 631 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 VARSP26640 1264 aaKnown RBP9.87□□□□□ -0.83
PHGDH-224ENST00000641711 HTR1EP28566 365 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 ID4P47928 161 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 GSK3BP49841 420 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 HNRNPFP52597 415 aaKnown RBP9.87□□□□□ -0.83
PHGDH-224ENST00000641711 UBE2IP63279 158 aaKnown RBP9.87□□□□□ -0.83
PHGDH-224ENST00000641711 GPLD1P80108 840 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 HHEXQ03014 270 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 PWP1Q13610 501 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 CAPRIN1Q14444 709 aaKnown RBP9.87□□□□□ -0.83
PHGDH-224ENST00000641711 NFE2L1Q14494 772 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 PTCHD3Q3KNS1 767 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 PLA2G4EQ3MJ16 856 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 TIGD2Q4W5G0 525 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-224ENST00000641711 CACHD1Q5VU97 1274 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 DLEU7Q6UYE1 221 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 PDZD3Q86UT5 571 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 SLC22A15Q8IZD6 547 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 ICA1LQ8NDH6 482 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 PHC3Q8NDX5 983 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 SLC37A2Q8TED4 501 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 VPS33AQ96AX1 596 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 SLCO4A1Q96BD0 722 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 CCDC138Q96M89 665 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 ZBTB18Q99592 522 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 OR52A5Q9H2C5 316 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 COPS7BQ9H9Q2 264 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-224ENST00000641711 CCM2LQ9NUG4 571 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-224ENST00000641711 AP3M1Q9Y2T2 418 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 PRKAB1Q9Y478 270 aa9.87□□□□□ -0.83
PHGDH-224ENST00000641711 POLR3HQ9Y535 204 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-224ENST00000641711 FAM221BA6H8Z2 402 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 ARHGEF33A8MVX0 844 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 FFAR3O14843 346 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 GPR42O15529 346 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 DENRO43583 198 aaKnown RBP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 SMNDC1O75940 238 aaKnown RBP eCLIP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 CATP04040 527 aaKnown RBP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 IL6P05231 212 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 MTHFD1P11586 935 aaKnown RBP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 PRPS2P11908 318 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 JUPP14923 745 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 ATP6V1B2P21281 511 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 MAP4P27816 1152 aaKnown RBP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 PBLDP30039 288 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 HSPA13P48723 471 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 AQP4P55087 323 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 RPL38P63173 70 aaKnown RBP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 LIPEQ05469 1076 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 BIRC2Q13490 618 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 E2F2Q14209 437 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 IMPG1Q17R60 797 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 GRAMD1BQ3KR37 738 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 LIPJQ5W064 366 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 CAPRIN2Q6IMN6 1127 aaKnown RBP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 NANOGP8Q6NSW7 305 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 UNC5DQ6UXZ4 953 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 TRIM48Q8IWZ4 208 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 ARL14Q8N4G2 192 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 ANKFN1Q8N957 763 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 OR8J3Q8NGG0 315 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 OR56A3Q8NH54 315 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 DNAJB8Q8NHS0 232 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 SKA2Q8WVK7 121 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 CXorf40BQ96DE9 158 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 METTL2AQ96IZ6 378 aaKnown RBP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 FCRL1Q96LA6 429 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 ACPTQ9BZG2 426 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 VCXQ9H320 206 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 ALG2Q9H553 416 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 CLMPQ9H6B4 373 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 MVB12BQ9H7P6 319 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 NANOGQ9H9S0 305 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 IL1RL2Q9HB29 575 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 FARSBQ9NSD9 589 aaKnown RBP9.86□□□□□ -0.83
PHGDH-224ENST00000641711 CPNE7Q9UBL6 633 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 RAB26Q9ULW5 256 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 TMED5Q9Y3A6 229 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 PLEKHM1Q9Y4G2 1056 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 SNX13Q9Y5W8 968 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 COLEC10Q9Y6Z7 277 aa9.86□□□□□ -0.83
PHGDH-224ENST00000641711 RHPN2P1A8MT19 583 aa9.85□□□□□ -0.83
PHGDH-224ENST00000641711 PRAMEF4O60810 478 aa9.85□□□□□ -0.83
PHGDH-224ENST00000641711 SEC22BO75396 215 aa9.85□□□□□ -0.83
PHGDH-224ENST00000641711 PDYNP01213 254 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms