RNA–Protein interactions for RNA: ENST00000638589.1

HNRNPU-215, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-215ENST00000638589 CCDC110Q8TBZ0 833 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 TEKT4Q8WW24 435 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 THRSPQ92748 146 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 KIAA1143Q96AT1 154 aaPredicted RBP3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 DHX58Q96C10 678 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 ZNF707Q96C28 371 aaPredicted RBP3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 SAT2Q96F10 170 aaPredicted RBP3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 C16orf58Q96GQ5 468 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 EGLN1Q9GZT9 426 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 TMEM117Q9H0C3 514 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 CARD9Q9H257 536 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 CLSTN2Q9H4D0 955 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 GAREM1Q9H706 876 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 KAT14Q9H8E8 782 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 AGPAT3Q9NRZ7 376 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 ABCB8Q9NUT2 735 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 DNAJC11Q9NVH1 559 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 C1RLQ9NZP8 487 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 STK39Q9UEW8 545 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 BAIAP2L1Q9UHR4 511 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 TRAF3IP3Q9Y228 551 aa3.34□□□□□ -1.88
HNRNPU-215ENST00000638589 NEDD4P46934 1319 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 IGHV4-28A0A0C4DH34 117 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 MEX3AA1L020 520 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 TMEM247A6NEH6 219 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 MFSD2BA6NFX1 497 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 GAGE10A6NGK3 116 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 E2F3O00716 465 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 ATP2A1O14983 1001 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 NVLO15381 856 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 POLR2DO15514 142 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 MED7O43513 233 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 PLRG1O43660 514 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 PRKAB2O43741 272 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 ECE2O60344 883 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 DAB1O75553 588 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 MT-CYBP00156 380 aaPredicted RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 LIPFP07098 398 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 FAM58BPP0C7Q3 252 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 HLA-DOBP13765 273 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 CKMT2P17540 419 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 DGKAP23743 735 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 AZGP1P25311 298 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 TKTP29401 623 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 CCKARP32238 428 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 MDH1P40925 334 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 YWHAZP63104 245 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 DYNLL1P63167 89 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 XIAPP98170 497 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 PPP2R2BQ00005 443 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 C15orf59Q2T9L4 293 aaPredicted RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 SBK1Q52WX2 424 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 IGSF11Q5DX21 431 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 NEPROQ6NW34 567 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 CORO6Q6QEF8 472 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 EXOC3L1Q86VI1 746 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 TMC8Q8IU68 726 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 GRAMD2AQ8IUY3 354 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 NHLRC2Q8NBF2 726 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 ZNF114Q8NC26 417 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 OR9A1PQ8NGU1 263 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 ACMSDQ8TDX5 336 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 NCLNQ969V3 563 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 TMCO6Q96DC7 493 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 CDCA5Q96FF9 252 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 IFT74Q96LB3 600 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 ATP6V1G3Q96LB4 118 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 MGME1Q9BQP7 344 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 FBRSL1Q9HCM7 1045 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 CNGB3Q9NQW8 809 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 INIPQ9NRY2 104 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 HCN3Q9P1Z3 774 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 FBXL17Q9UF56 701 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 TUBE1Q9UJT0 475 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 ANAPC2Q9UJX6 822 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 GMEB2Q9UKD1 530 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 KIAA1257Q9ULG3 409 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 MTMR6Q9Y217 621 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 CARD8Q9Y2G2 431 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 STRAPQ9Y3F4 350 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 LIPGQ9Y5X9 500 aa3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 ATXN2Q99700 1313 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-215ENST00000638589 DOCK1Q14185 1865 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 A0A087WYN8 130 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 A0A1B0GVM2 712 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 GOLGA6L10A6NI86 522 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 YDJCA8MPS7 323 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 H3BQF6 201 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 PSMD14O00487 310 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 NDUFAB1O14561 156 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 LIN7AO14910 233 aaPredicted RBP3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 MID1O15344 667 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 SERPINI2O75830 405 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 RECQL5O94762 991 aaPredicted RBP3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 EGFP01133 1207 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 EIF2S1P05198 315 aaKnown RBP3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 ABCB1P08183 1280 aaPredicted RBP3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 RHOXF2BP0C7M4 288 aa3.32□□□□□ -1.88
HNRNPU-215ENST00000638589 TROVE2P10155 538 aaKnown RBP eCLIP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms