RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 UBE3DQ7Z6J8 389 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 RETREG3Q86VR2 466 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 TBC1D19Q8N5T2 526 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 TRPV3Q8NET8 790 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 TSPEARQ8WU66 669 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 UTP4Q969X6 686 aaKnown RBP20.13■□□□□ 0.81
CLN8-213ENST00000637156 SPDL1Q96EA4 605 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 DUSP23Q9BVJ7 150 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 MAP10Q9P2G4 905 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 A0A1W2PP18 115 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 B4GAT1O43505 415 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 MYO1DO94832 1006 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 KLK1P06870 262 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 ITGAXP20702 1163 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 NUDT2P50583 147 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 KCNK10P57789 538 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 OR1D5P58170 312 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 RPS15AP62244 130 aaKnown RBP20.13■□□□□ 0.81
CLN8-213ENST00000637156 RELAQ04206 551 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 RIMKLAQ8IXN7 391 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 OR4C6Q8NH72 309 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 REXO4Q9GZR2 422 aaKnown RBP20.13■□□□□ 0.81
CLN8-213ENST00000637156 CLMPQ9H6B4 373 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 LHX9Q9NQ69 397 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 ANKMY1Q9P2S6 941 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 PADI4Q9UM07 663 aa20.13■□□□□ 0.81
CLN8-213ENST00000637156 A0A0J9YVX5 310 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 ASPDHA6ND91 283 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 RTCAO00442 366 aaKnown RBP20.12■□□□□ 0.81
CLN8-213ENST00000637156 SEMA3DO95025 777 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 ST6GAL1P15907 406 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 GSTM2P28161 218 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 TIA1P31483 386 aaKnown RBP eCLIP20.12■□□□□ 0.81
CLN8-213ENST00000637156 DGKQP52824 942 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 EPHA4P54764 986 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 TLR1Q15399 786 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 ADPRMQ3LIE5 342 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 MMEL1Q495T6 779 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 REP15Q6BDI9 236 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 IRGCQ6NXR0 463 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 ZCCHC8Q6NZY4 707 aaKnown RBP20.12■□□□□ 0.81
CLN8-213ENST00000637156 DSELQ8IZU8 1212 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.12■□□□□ 0.81
CLN8-213ENST00000637156 SLC13A3Q8WWT9 602 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 GFM2Q969S9 779 aaKnown RBP20.12■□□□□ 0.81
CLN8-213ENST00000637156 LOXL4Q96JB6 756 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 RASSF4Q9H2L5 321 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 SEMA6CQ9H3T2 930 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 AHSPQ9NZD4 102 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 GMEB2Q9UKD1 530 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 NDUFAF1Q9Y375 327 aa20.12■□□□□ 0.81
CLN8-213ENST00000637156 CAPN5O15484 640 aaPredicted RBP20.11■□□□□ 0.81
CLN8-213ENST00000637156 YKT6O15498 198 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 NDUFS4O43181 175 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 KIF1CO43896 1103 aaKnown RBP20.11■□□□□ 0.81
CLN8-213ENST00000637156 PCDH7O60245 1069 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 LRATO95237 230 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 NQO1P15559 274 aaKnown RBP20.11■□□□□ 0.81
CLN8-213ENST00000637156 BSGP35613 385 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 MPLP40238 635 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 TM4SF19Q96DZ7 209 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 TRAPPC9Q96Q05 1148 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 MAP3K3Q99759 626 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 FAM60AQ9NP50 221 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 IGHV1OR21-1A0A087WYE8 117 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 LOC105369274A0A096LPK9 316 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 LOC102723532A0A0G2JNH3 316 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 GNG14A0A1W2PPG7 69 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 CCDC154A6NI56 674 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 CASC3O15234 703 aaKnown RBP20.11■□□□□ 0.81
CLN8-213ENST00000637156 SIGLEC6O43699 453 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 SH3BP5O60239 455 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 EEDO75530 441 aaKnown RBP20.11■□□□□ 0.81
CLN8-213ENST00000637156 EPN2O95208 641 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 SYPP08247 313 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 KRT16P08779 473 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 PCSK2P16519 638 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 TPP2P29144 1249 aaPredicted RBP20.11■□□□□ 0.81
CLN8-213ENST00000637156 GPR3P46089 330 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 CCT8P50990 548 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 ART3Q13508 389 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 FRMPD2BQ6IN97 320 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 FAM9CQ8IZT9 166 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 OR4N4Q8N0Y3 316 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 GLB1L3Q8NCI6 653 aaPredicted RBP20.11■□□□□ 0.81
CLN8-213ENST00000637156 NCSTNQ92542 709 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 MS4A6EQ96DS6 147 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 RAB33BQ9H082 229 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 GPR179Q6PRD1 2367 aa20.11■□□□□ 0.81
CLN8-213ENST00000637156 LY6G6EA0A0G2JKS1 128 aa20.1■□□□□ 0.81
CLN8-213ENST00000637156 PRR33A8MZF0 331 aa20.1■□□□□ 0.81
CLN8-213ENST00000637156 HCRTR1O43613 425 aa20.1■□□□□ 0.81
CLN8-213ENST00000637156 CDH3P22223 829 aa20.1■□□□□ 0.81
CLN8-213ENST00000637156 PLA2G16P53816 162 aa20.1■□□□□ 0.81
CLN8-213ENST00000637156 GFERP55789 205 aa20.1■□□□□ 0.81
CLN8-213ENST00000637156 PHC1P78364 1004 aa20.1■□□□□ 0.81
CLN8-213ENST00000637156 CFHR1Q03591 330 aa20.1■□□□□ 0.81
CLN8-213ENST00000637156 NR1D2Q14995 579 aa20.1■□□□□ 0.81
CLN8-213ENST00000637156 FAM174BQ3ZCQ3 159 aa20.1■□□□□ 0.81
CLN8-213ENST00000637156 TIGD2Q4W5G0 525 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms