RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 TMEM35AQ53FP2 167 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 NKAPLQ5M9Q1 402 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FSTL4Q6MZW2 842 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 BRAT1Q6PJG6 821 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 JOSD2Q8TAC2 188 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 GNPDA2Q8TDQ7 276 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 ZNF578Q96N58 590 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 MTERF1Q99551 399 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 WDR18Q9BV38 432 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 MRIQ9BWK5 157 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 SLC32A1Q9H598 525 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FZD3Q9NPG1 666 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FAM120CQ9NX05 1096 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FCF1Q9Y324 198 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 HSPB11Q9Y547 144 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 PCDHGA2Q9Y5H1 932 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 A6NLC8 198 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 PDLIM1O00151 329 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 SOX1O00570 391 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 POLR1CO15160 346 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 SCAF4O95104 1147 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 H2BFMP0C1H6 154 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 THEGLP0DJG4 465 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 HERVK_113P63132 956 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 GSTM4Q03013 218 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 TRAM2Q15035 370 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 SF3B4Q15427 424 aaKnown RBP eCLIP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 DPYSL2Q16555 572 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 TSTQ16762 297 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 DUSP28Q4G0W2 176 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 GPR157Q5UAW9 335 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 C1orf94Q6P1W5 598 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 RFWD3Q6PCD5 774 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 HMCESQ96FZ2 354 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 IL4I1Q96RQ9 567 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 NAA11Q9BSU3 229 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 TRMT61BQ9BVS5 477 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 TSSK6Q9BXA6 273 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 ERVK-6Q9BXR3 956 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 GMEB2Q9UKD1 530 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 ERVK-19Q9WJR5 959 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 PCYT1BQ9Y5K3 369 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FAM237AA0A1B0GTK4 181 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 RNF13O43567 381 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 HOXD8P13378 290 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 BMP6P22004 513 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 CCND3P30281 292 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 MARCKSL1P49006 195 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 RPP30P78346 268 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 RPA4Q13156 261 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 MELKQ14680 651 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 GRIK5Q16478 980 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FAM214AQ32MH5 1076 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FRG2Q64ET8 278 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 TPGS2Q68CL5 300 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 TMEM225Q6GV28 225 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 LIX1LQ8IVB5 337 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 RASGEF1CQ8N431 466 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 PPP1R35Q8TAP8 253 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 AKT1S1Q96B36 256 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FUBP3Q96I24 572 aaKnown RBP eCLIP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 ZNF641Q96N77 438 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 ALPK1Q96QP1 1244 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FRG2BQ96QU4 278 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 HNRNPABQ99729 332 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 WDR77Q9BQA1 342 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 SULT4A1Q9BR01 284 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 PELOQ9BRX2 385 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 WACQ9BTA9 647 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 ZNF701Q9NV72 531 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 ACTR3BQ9P1U1 418 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FNIP2Q9P278 1114 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 LGALS13Q9UHV8 139 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 EDARQ9UNE0 448 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 A0A1W2PPL8 197 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FAM221BA6H8Z2 402 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 EI24O14681 340 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 AURKAO14965 403 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 INMTO95050 263 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 JMJD7P0C870 316 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 ENGP17813 658 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 PFKLP17858 780 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 HNRNPH3P31942 346 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 LRP8Q14114 963 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 LASP1Q14847 261 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 ZNF404Q494X3 552 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 GPR139Q6DWJ6 353 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 LRRC55Q6ZSA7 311 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 ZNF808Q8N4W9 903 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 FAM46DQ8NEK8 389 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 G6PC3Q9BUM1 346 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 POLDIP3Q9BY77 421 aaKnown RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 SIRPGQ9P1W8 387 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 IGSF9Q9P2J2 1179 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 IL36AQ9UHA7 158 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 UBE2J1Q9Y385 318 aaPredicted RBP8.67□□□□□ -1.02
GABRB3-216ENST00000628124 LRRC42Q9Y546 428 aa8.67□□□□□ -1.02
GABRB3-216ENST00000628124 NEXMIFQ5QGS0 1516 aa8.66□□□□□ -1.02
GABRB3-216ENST00000628124 INMT-MINDY4F8WBC2 141 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms