RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 DDCP20711 480 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 CPN2P22792 545 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 HOXC13P31276 330 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 CSTF2P33240 577 aaKnown RBP eCLIP14.65□□□□□ -0.06
PMS1-221ENST00000624204 ACVRL1P37023 503 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 LHX1P48742 406 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 SMSP52788 366 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 MLLT6P55198 1093 aaPredicted RBP14.65□□□□□ -0.06
PMS1-221ENST00000624204 DSC3Q14574 896 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 GANABQ14697 944 aaKnown RBP14.65□□□□□ -0.06
PMS1-221ENST00000624204 SUZ12Q15022 739 aaKnown RBP14.65□□□□□ -0.06
PMS1-221ENST00000624204 LARS2Q15031 903 aaKnown RBP14.65□□□□□ -0.06
PMS1-221ENST00000624204 POU4F3Q15319 338 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 CTSL3PQ5NE16 218 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 LIPKQ5VXJ0 399 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 LIMS2Q7Z4I7 341 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 LGI4Q8N135 537 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 GHDCQ8N2G8 530 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 DNAJB3Q8WWF6 145 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 PEX13Q92968 403 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 OPALINQ96PE5 141 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 AIFM2Q9BRQ8 373 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 B3GNT2Q9NY97 397 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 A0A1B0GVC2 190 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 A6NIN4 97 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 KCNK5O95279 499 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 APEX1P27695 318 aaKnown RBP14.64□□□□□ -0.07
PMS1-221ENST00000624204 EVI2BP34910 448 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 ARHGEF7Q14155 803 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 EIF4HQ15056 248 aaKnown RBP14.64□□□□□ -0.07
PMS1-221ENST00000624204 LRIF1Q5T3J3 769 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 CCDC149Q6ZUS6 474 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 BCDIN3DQ7Z5W3 292 aaKnown RBP14.64□□□□□ -0.07
PMS1-221ENST00000624204 FAM124AQ86V42 546 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 PLPP6Q8IY26 295 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 SDR16C5Q8N3Y7 309 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 CLDN19Q8N6F1 224 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 C9orf43Q8TAL5 461 aaPredicted RBP14.64□□□□□ -0.07
PMS1-221ENST00000624204 HHATLQ9HCP6 504 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 HLA-DMAP28067 261 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 CBLL1Q75N03 491 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 APOLD1Q96LR9 279 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 COMMD3Q9UBI1 195 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 PPT2Q9UMR5 302 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 SSR3Q9UNL2 185 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 NYNRINQ9P2P1 1898 aaKnown RBP14.64□□□□□ -0.07
PMS1-221ENST00000624204 SLC35F4A4IF30 521 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 BNIP3LO60238 219 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 RAMP2O60895 175 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 SLC2A2P11168 524 aaPredicted RBP14.64□□□□□ -0.07
PMS1-221ENST00000624204 NAGAP17050 411 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 SOX9P48436 509 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 CCT3P49368 545 aaKnown RBP14.64□□□□□ -0.07
PMS1-221ENST00000624204 CDC42P60953 191 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.64□□□□□ -0.07
PMS1-221ENST00000624204 SNTA1Q13424 505 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 DGKKQ5KSL6 1271 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 AFMIDQ63HM1 303 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 SLC37A3Q8NCC5 494 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 DENND6BQ8NEG7 585 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 TMEM40Q8WWA1 233 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 POP5Q969H6 163 aaKnown RBP14.64□□□□□ -0.07
PMS1-221ENST00000624204 POLR2J2Q9GZM3 115 aaKnown RBP14.64□□□□□ -0.07
PMS1-221ENST00000624204 NDRG2Q9UN36 371 aaKnown RBP14.64□□□□□ -0.07
PMS1-221ENST00000624204 MAPRE3Q9UPY8 281 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 PTCH2Q9Y6C5 1203 aa14.64□□□□□ -0.07
PMS1-221ENST00000624204 LOC102723532A0A0G2JNH3 316 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 MYL12BO14950 172 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 CCNB2O95067 398 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 CTSHP09668 335 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 MYL12AP19105 171 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 KIR3DL1P43629 444 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 EFEMP1Q12805 493 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 ZMYND11Q15326 602 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 PCBP2Q15366 365 aaKnown RBP eCLIP14.63□□□□□ -0.07
PMS1-221ENST00000624204 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.63□□□□□ -0.07
PMS1-221ENST00000624204 KCTD20Q7Z5Y7 419 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 POF1BQ8WVV4 589 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 SELENOMQ8WWX9 145 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 ZYG11BQ9C0D3 744 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 C11orf16Q9NQ32 467 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 ABCC13Q9NSE7 274 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 PCDHGC4Q9Y5F7 938 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 KCNE2Q9Y6J6 123 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 C2orf81A6NN90 581 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 MANBAO00462 879 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 SERPINI2O75830 405 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 SLC22A5O76082 557 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 KCNE1P15382 129 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 COL9A2Q14055 689 aaPredicted RBP14.63□□□□□ -0.07
PMS1-221ENST00000624204 ZNF284Q2VY69 593 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 IQCCQ4KMZ1 466 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 ZBTB37Q5TC79 503 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 DDI2Q5TDH0 399 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 ANKRD54Q6NXT1 300 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 PHC2Q8IXK0 858 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 RPRD1AQ96P16 312 aaPredicted RBP14.63□□□□□ -0.07
PMS1-221ENST00000624204 NLE1Q9NVX2 485 aaPredicted RBP14.63□□□□□ -0.07
PMS1-221ENST00000624204 ELOVL2Q9NXB9 296 aa14.63□□□□□ -0.07
PMS1-221ENST00000624204 PTGESO14684 152 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms